Wall clock time and date at job start Sat Mar 6 2021 08:01:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.37697 * 125.67792 * 2 1 4 4 C 1.46487 * 126.23441 * 359.96293 * 3 2 1 5 5 O 1.21629 * 119.99816 * 179.71958 * 4 3 2 6 6 O 1.34886 * 120.00401 * 359.71664 * 4 3 2 7 7 C 1.45203 * 117.00368 * 180.02562 * 6 4 3 8 8 C 1.50703 * 109.47225 * 180.02562 * 7 6 4 9 9 C 1.38236 * 119.99435 * 269.72714 * 8 7 6 10 10 C 1.38236 * 119.99788 * 179.76905 * 9 8 7 11 11 C 1.38241 * 119.99544 * 0.50216 * 10 9 8 12 12 Si 1.86807 * 119.99732 * 179.72796 * 11 10 9 13 13 C 1.86298 * 109.46916 * 270.02072 * 12 11 10 14 14 C 1.86302 * 109.47275 * 30.02233 * 12 11 10 15 15 C 1.86303 * 109.47188 * 150.02240 * 12 11 10 16 16 C 1.38229 * 120.00195 * 359.74642 * 11 10 9 17 17 C 1.38230 * 120.00313 * 89.99590 * 8 7 6 18 18 C 1.37990 * 107.52764 * 179.70486 * 3 2 1 19 19 C 1.39817 * 107.08076 * 0.26030 * 18 3 2 20 20 Br 1.89105 * 126.06554 * 179.97438 * 19 18 3 21 21 C 1.35543 * 107.87318 * 0.02562 * 19 18 3 22 22 C 1.50705 * 125.56378 * 180.02562 * 21 19 18 23 23 O 1.42897 * 109.46879 * 302.46175 * 22 21 19 24 24 Si 1.86303 * 109.47093 * 62.46212 * 22 21 19 25 25 H 1.48493 * 109.47060 * 53.97772 * 24 22 21 26 26 H 1.48497 * 109.46858 * 173.97836 * 24 22 21 27 27 H 1.48495 * 109.46842 * 293.97521 * 24 22 21 28 28 H 1.09005 * 109.47168 * 90.02657 * 1 2 3 29 29 H 1.09002 * 109.46895 * 210.02702 * 1 2 3 30 30 H 1.09001 * 109.47154 * 330.02924 * 1 2 3 31 31 H 1.08999 * 109.46811 * 59.99986 * 7 6 4 32 32 H 1.08996 * 109.46800 * 300.00006 * 7 6 4 33 33 H 1.08001 * 120.00696 * 359.97438 * 9 8 7 34 34 H 1.07997 * 120.00203 * 180.22787 * 10 9 8 35 35 H 1.09003 * 109.46949 * 60.00402 * 13 12 11 36 36 H 1.09000 * 109.47235 * 179.97438 * 13 12 11 37 37 H 1.08997 * 109.47519 * 299.99910 * 13 12 11 38 38 H 1.09003 * 109.46871 * 59.99686 * 14 12 11 39 39 H 1.09000 * 109.47173 * 180.02562 * 14 12 11 40 40 H 1.09007 * 109.46653 * 300.00305 * 14 12 11 41 41 H 1.09000 * 109.46917 * 59.99683 * 15 12 11 42 42 H 1.08990 * 109.47026 * 179.97438 * 15 12 11 43 43 H 1.08999 * 109.46479 * 300.00159 * 15 12 11 44 44 H 1.08003 * 119.99758 * 179.97438 * 16 11 10 45 45 H 1.07998 * 119.99874 * 0.02562 * 17 8 7 46 46 H 1.07996 * 126.45822 * 180.25815 * 18 3 2 47 47 H 1.08995 * 109.47082 * 182.46162 * 22 21 19 48 48 H 0.96703 * 114.00252 * 59.99933 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2681 1.1185 0.0000 4 6 1.8133 2.5110 -0.0008 5 8 2.6258 3.4161 0.0045 6 8 0.4935 2.7895 -0.0073 7 6 0.1155 4.1915 -0.0083 8 6 -1.3870 4.3067 -0.0153 9 6 -2.0700 4.3660 -1.2157 10 6 -3.4487 4.4669 -1.2222 11 6 -4.1435 4.5189 -0.0282 12 14 -6.0060 4.6629 -0.0370 13 6 -6.4897 6.4620 -0.0382 14 6 -6.6856 3.8361 -1.5619 15 6 -6.7001 3.8343 1.4804 16 6 -3.4601 4.4649 1.1721 17 6 -2.0819 4.3588 1.1786 18 6 3.5793 0.6887 0.0068 19 6 3.5532 -0.7092 0.0048 20 35 5.0608 -1.8509 0.0111 21 6 2.2557 -1.1011 -0.0036 22 6 1.7711 -2.5281 -0.0078 23 8 2.3096 -3.2106 -1.1419 24 14 2.3307 -3.3786 1.5524 25 1 1.8937 -2.5882 2.7311 26 1 1.7328 -4.7364 1.6177 27 1 3.8115 -3.4893 1.5519 28 1 -0.3634 -0.0005 -1.0277 29 1 -0.3633 -0.8898 0.5143 30 1 -0.3633 0.8902 0.5134 31 1 0.5217 4.6766 -0.8958 32 1 0.5125 4.6753 0.8841 33 1 -1.5268 4.3301 -2.1485 34 1 -3.9826 4.5094 -2.1600 35 1 -6.0836 6.9468 -0.9260 36 1 -7.5764 6.5461 -0.0437 37 1 -6.0921 6.9458 0.8540 38 1 -6.4025 2.7835 -1.5612 39 1 -7.7723 3.9205 -1.5672 40 1 -6.2794 4.3210 -2.4497 41 1 -6.3024 4.3180 2.3725 42 1 -7.7867 3.9187 1.4755 43 1 -6.4170 2.7817 1.4810 44 1 -4.0030 4.5060 2.1049 45 1 -1.5479 4.3173 2.1164 46 1 4.4597 1.3142 0.0125 47 1 0.6824 -2.5419 -0.0587 48 1 3.2760 -3.2374 -1.1624 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_4999870_9435856.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 08:01:16 Heat of formation + Delta-G solvation = -83.700081 kcal Electronic energy + Delta-G solvation = -29734.427729 eV Core-core repulsion = 25538.984212 eV Total energy + Delta-G solvation = -4195.443517 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 425.062 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -42.92451 -41.21004 -40.00861 -37.97938 -37.52722 -34.62625 -33.18362 -32.25606 -32.00111 -31.13012 -29.66500 -28.52559 -28.48575 -28.05488 -27.51083 -26.66232 -23.84561 -23.59501 -22.15754 -21.46222 -20.96464 -19.09248 -18.57655 -18.21798 -17.73029 -17.39801 -16.96398 -16.43182 -16.19834 -16.01867 -15.84952 -15.23267 -14.95058 -14.71510 -14.49113 -14.36323 -14.30080 -14.27220 -14.19180 -14.16467 -14.01710 -13.93724 -13.82397 -13.58044 -13.35469 -13.34135 -13.26597 -13.17889 -12.84809 -12.79279 -12.70414 -12.23887 -12.17149 -11.85415 -11.77807 -11.73158 -11.12476 -10.98723 -10.94032 -10.92569 -10.74504 -9.90010 -9.85895 -9.80512 -9.37994 -0.05710 0.00509 0.42807 0.49675 0.77488 1.10013 1.37386 1.42215 1.48738 1.61032 1.71760 1.76466 1.90351 1.93062 1.93698 2.45709 2.84388 3.09115 3.33095 3.47183 3.56483 3.71249 3.71921 3.75922 3.99635 4.05935 4.14425 4.21014 4.25307 4.39229 4.41443 4.55434 4.57579 4.59231 4.62617 4.63711 4.67604 4.67839 4.68833 4.69638 4.87944 5.03890 5.16588 5.23207 5.31156 5.38031 5.41385 5.47031 5.49689 5.50416 5.52015 5.69899 5.99027 6.26345 6.61982 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.058 3.942 2 N -0.396 5.396 3 C -0.031 4.031 4 C 0.541 3.459 5 O -0.490 6.490 6 O -0.354 6.354 7 C 0.110 3.890 8 C -0.092 4.092 9 C -0.105 4.105 10 C -0.091 4.091 11 C -0.359 4.359 12 Si 1.060 2.940 13 C -0.450 4.450 14 C -0.450 4.450 15 C -0.450 4.450 16 C -0.091 4.091 17 C -0.106 4.106 18 C -0.059 4.059 19 C -0.186 4.186 20 Br -0.011 7.011 21 C 0.071 3.929 22 C -0.064 4.064 23 O -0.526 6.526 24 Si 0.924 3.076 25 H -0.245 1.245 26 H -0.238 1.238 27 H -0.213 1.213 28 H 0.088 0.912 29 H 0.092 0.908 30 H 0.108 0.892 31 H 0.083 0.917 32 H 0.083 0.917 33 H 0.121 0.879 34 H 0.124 0.876 35 H 0.069 0.931 36 H 0.071 0.929 37 H 0.069 0.931 38 H 0.070 0.930 39 H 0.072 0.928 40 H 0.069 0.931 41 H 0.069 0.931 42 H 0.072 0.928 43 H 0.070 0.930 44 H 0.124 0.876 45 H 0.121 0.879 46 H 0.166 0.834 47 H 0.122 0.878 48 H 0.378 0.622 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.234 -0.737 1.017 5.382 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 N -0.071 5.071 3 C -0.141 4.141 4 C 0.385 3.615 5 O -0.377 6.377 6 O -0.271 6.271 7 C 0.037 3.963 8 C -0.092 4.092 9 C -0.123 4.123 10 C -0.109 4.109 11 C -0.400 4.400 12 Si 1.252 2.748 13 C -0.557 4.557 14 C -0.558 4.558 15 C -0.557 4.557 16 C -0.109 4.109 17 C -0.124 4.124 18 C -0.085 4.085 19 C -0.272 4.272 20 Br 0.073 6.927 21 C -0.052 4.052 22 C -0.174 4.174 23 O -0.333 6.333 24 Si 0.740 3.260 25 H -0.168 1.168 26 H -0.160 1.160 27 H -0.134 1.134 28 H 0.107 0.893 29 H 0.111 0.889 30 H 0.126 0.874 31 H 0.101 0.899 32 H 0.101 0.899 33 H 0.139 0.861 34 H 0.142 0.858 35 H 0.089 0.911 36 H 0.090 0.910 37 H 0.089 0.911 38 H 0.090 0.910 39 H 0.091 0.909 40 H 0.088 0.912 41 H 0.088 0.912 42 H 0.091 0.909 43 H 0.089 0.911 44 H 0.142 0.858 45 H 0.139 0.861 46 H 0.183 0.817 47 H 0.140 0.860 48 H 0.228 0.772 Dipole moment (debyes) X Y Z Total from point charges -5.141 -1.266 1.623 5.537 hybrid contribution 0.261 0.899 -0.414 1.024 sum -4.880 -0.367 1.209 5.041 Atomic orbital electron populations 1.22495 0.74731 1.05878 1.05114 1.43996 1.07273 1.04187 1.51655 1.19334 0.90125 0.84093 1.20555 1.19569 0.80923 0.87511 0.73485 1.90955 1.54762 1.46093 1.45932 1.86639 1.25324 1.30647 1.84527 1.21917 0.91831 0.78630 1.03919 1.19463 0.92942 1.02679 0.94115 1.21172 0.94877 0.99108 0.97175 1.21097 0.93676 0.97796 0.98318 1.27506 1.17336 1.01056 0.94152 0.78187 0.61805 0.67479 0.67364 1.26130 1.05537 1.19410 1.04660 1.26138 1.06758 1.07791 1.15073 1.26134 1.06851 1.07798 1.14963 1.21090 0.93737 0.97830 0.98252 1.21164 0.94806 0.99219 0.97227 1.21187 0.95090 0.92410 0.99830 1.20717 0.91235 0.94614 1.20622 1.96675 1.36506 1.61444 1.98068 1.20969 0.89514 0.90213 1.04518 1.24772 1.03374 0.87511 1.01777 1.86547 1.26843 1.75938 1.43945 0.85995 0.84652 0.80886 0.74479 1.16819 1.16043 1.13407 0.89305 0.88950 0.87358 0.89859 0.89874 0.86064 0.85806 0.91147 0.90969 0.91146 0.91049 0.90888 0.91155 0.91161 0.90887 0.91053 0.85812 0.86074 0.81665 0.86013 0.77196 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.12 10.18 59.85 0.61 0.48 16 2 N -0.40 -0.31 3.16 -115.60 -0.37 -0.68 16 3 C -0.03 -0.07 6.88 -82.00 -0.56 -0.64 16 4 C 0.54 1.62 7.92 34.05 0.27 1.89 16 5 O -0.49 -2.66 16.68 -19.36 -0.32 -2.99 16 6 O -0.35 -0.46 7.64 -41.00 -0.31 -0.78 16 7 C 0.11 0.05 5.60 36.01 0.20 0.26 16 8 C -0.09 -0.02 5.52 -104.62 -0.58 -0.60 16 9 C -0.11 0.01 9.70 -39.58 -0.38 -0.38 16 10 C -0.09 0.07 9.29 -39.58 -0.37 -0.30 16 11 C -0.36 0.46 4.59 -39.58 -0.18 0.28 16 12 Si 1.06 -3.58 12.32 -169.99 -2.09 -5.68 16 13 C -0.45 0.96 8.65 101.05 0.87 1.84 16 14 C -0.45 1.17 8.53 101.05 0.86 2.03 16 15 C -0.45 1.19 8.53 101.05 0.86 2.05 16 16 C -0.09 0.08 9.29 -39.59 -0.37 -0.29 16 17 C -0.11 0.02 9.70 -39.59 -0.38 -0.37 16 18 C -0.06 -0.14 10.63 -39.08 -0.42 -0.55 16 19 C -0.19 -0.33 6.06 -39.95 -0.24 -0.57 16 20 Br -0.01 -0.01 28.75 -68.01 -1.96 -1.97 16 21 C 0.07 0.07 5.35 -81.91 -0.44 -0.37 16 22 C -0.06 0.03 2.80 36.01 0.10 0.13 16 23 O -0.53 -0.50 12.88 -35.23 -0.45 -0.96 16 24 Si 0.92 -0.50 26.63 -169.99 -4.53 -5.03 16 25 H -0.25 -0.06 7.11 56.52 0.40 0.34 16 26 H -0.24 0.00 7.11 56.52 0.40 0.40 16 27 H -0.21 0.08 5.57 56.52 0.31 0.40 16 28 H 0.09 -0.24 8.14 -51.93 -0.42 -0.66 16 29 H 0.09 -0.41 7.03 -51.93 -0.37 -0.77 16 30 H 0.11 -0.21 6.16 -51.93 -0.32 -0.53 16 31 H 0.08 0.03 8.08 -51.93 -0.42 -0.39 16 32 H 0.08 0.02 8.08 -51.93 -0.42 -0.40 16 33 H 0.12 -0.14 8.06 -52.49 -0.42 -0.56 16 34 H 0.12 -0.31 7.43 -52.49 -0.39 -0.70 16 35 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 36 H 0.07 -0.16 7.96 -51.93 -0.41 -0.58 16 37 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 38 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 39 H 0.07 -0.19 7.96 -51.93 -0.41 -0.60 16 40 H 0.07 -0.19 7.69 -51.92 -0.40 -0.59 16 41 H 0.07 -0.19 7.69 -51.93 -0.40 -0.59 16 42 H 0.07 -0.19 7.96 -51.93 -0.41 -0.61 16 43 H 0.07 -0.17 7.96 -51.93 -0.41 -0.59 16 44 H 0.12 -0.33 7.43 -52.48 -0.39 -0.72 16 45 H 0.12 -0.16 8.06 -52.49 -0.42 -0.59 16 46 H 0.17 0.26 8.06 -52.49 -0.42 -0.17 16 47 H 0.12 -0.30 6.52 -51.93 -0.34 -0.64 16 48 H 0.38 -0.13 6.37 45.56 0.29 0.16 16 LS Contribution 417.63 15.07 6.29 6.29 Total: 0.00 -6.42 417.63 -10.50 -16.92 By element: Atomic # 1 Polarization: -3.43 SS G_CDS: -6.62 Total: -10.05 kcal Atomic # 6 Polarization: 5.05 SS G_CDS: -0.14 Total: 4.90 kcal Atomic # 7 Polarization: -0.31 SS G_CDS: -0.37 Total: -0.68 kcal Atomic # 8 Polarization: -3.63 SS G_CDS: -1.09 Total: -4.72 kcal Atomic # 14 Polarization: -4.08 SS G_CDS: -6.62 Total: -10.70 kcal Atomic # 35 Polarization: -0.01 SS G_CDS: -1.96 Total: -1.97 kcal Total LS contribution 6.29 Total: 6.29 kcal Total: -6.42 -10.50 -16.92 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_4999870_9435856.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.775 kcal (2) G-P(sol) polarization free energy of solvation -6.423 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.199 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.502 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.925 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.700 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds