Wall clock time and date at job start Sat Mar 6 2021 07:17:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86295 * 109.47470 * 2 1 4 4 C 1.50704 * 109.46791 * 119.99594 * 2 1 3 5 5 C 1.38244 * 119.97444 * 245.00011 * 4 2 1 6 6 C 1.38289 * 120.11248 * 179.97438 * 5 4 2 7 7 C 1.38123 * 120.05526 * 0.03846 * 6 5 4 8 8 C 1.38756 * 119.94251 * 359.97438 * 7 6 5 9 9 O 1.35902 * 120.05146 * 180.02562 * 8 7 6 10 10 C 1.42899 * 117.00081 * 0.02562 * 9 8 7 11 11 F 1.39900 * 109.47207 * 60.00270 * 10 9 8 12 12 F 1.39902 * 109.47315 * 299.99734 * 10 9 8 13 13 C 1.50701 * 109.46935 * 180.02562 * 10 9 8 14 14 O 1.20824 * 120.00121 * 0.02562 * 13 10 9 15 15 O 1.34235 * 119.99849 * 180.02562 * 13 10 9 16 16 C 1.45199 * 116.99751 * 179.97438 * 15 13 10 17 17 C 1.52997 * 109.47054 * 179.97438 * 16 15 13 18 18 H 1.09002 * 109.47497 * 54.99789 * 17 16 15 19 19 C 1.53002 * 109.47415 * 175.00141 * 17 16 15 20 20 C 1.53000 * 109.47233 * 180.02562 * 19 17 16 21 21 C 1.52997 * 109.47060 * 299.99657 * 20 19 17 22 22 H 1.09002 * 109.47153 * 300.00319 * 21 20 19 23 23 O 1.42895 * 109.47503 * 180.02562 * 21 20 19 24 24 C 1.52999 * 109.47317 * 59.99960 * 21 20 19 25 25 C 1.52997 * 109.47232 * 295.00015 * 17 16 15 26 26 C 1.38172 * 119.97275 * 65.30002 * 4 2 1 27 27 H 0.96697 * 114.00472 * 300.00614 * 1 2 3 28 28 H 1.09002 * 109.47632 * 239.99313 * 2 1 3 29 29 H 1.48503 * 110.00153 * 178.67768 * 3 2 1 30 30 H 1.48503 * 109.99807 * 299.99849 * 3 2 1 31 31 H 1.08001 * 119.93869 * 359.97438 * 5 4 2 32 32 H 1.08000 * 119.97103 * 180.02562 * 6 5 4 33 33 H 1.07991 * 120.02686 * 179.97438 * 7 6 5 34 34 H 1.09000 * 109.47354 * 60.00172 * 16 15 13 35 35 H 1.09001 * 109.47208 * 299.99880 * 16 15 13 36 36 H 1.08992 * 109.47063 * 59.99950 * 19 17 16 37 37 H 1.09004 * 109.46733 * 299.99664 * 19 17 16 38 38 H 1.09002 * 109.47398 * 59.99826 * 20 19 17 39 39 H 1.09001 * 109.47194 * 180.02562 * 20 19 17 40 40 H 0.96698 * 114.00355 * 180.02562 * 23 21 20 41 41 H 1.09000 * 109.47486 * 180.02562 * 24 21 20 42 42 H 1.09002 * 109.46716 * 60.00091 * 24 21 20 43 43 H 1.09002 * 109.47153 * 299.99992 * 25 17 16 44 44 H 1.09001 * 109.47289 * 60.00075 * 25 17 16 45 45 H 1.08008 * 120.02603 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 2.6386 -0.0116 2.1911 6 6 3.1003 -0.6605 3.3216 7 6 2.8564 -2.0091 3.4934 8 6 2.1469 -2.7127 2.5307 9 8 1.9051 -4.0396 2.6977 10 6 2.4104 -4.6462 3.8888 11 9 1.8492 -4.0184 5.0060 12 9 3.8022 -4.5100 3.9273 13 6 2.0489 -6.1092 3.8997 14 8 1.4232 -6.5837 2.9814 15 8 2.4220 -6.8850 4.9296 16 6 2.0387 -8.2844 4.8733 17 6 2.5486 -9.0035 6.1239 18 1 2.1846 -8.4886 7.0130 19 6 2.0396 -10.4463 6.1258 20 6 2.5490 -11.1652 7.3767 21 6 4.0789 -11.1643 7.3779 22 1 4.4433 -11.6793 6.4891 23 8 4.5548 -11.8361 8.5459 24 6 4.5881 -9.7215 7.3760 25 6 4.0786 -9.0025 6.1246 26 6 1.6897 -2.0608 1.3949 27 1 -0.3934 0.4418 0.7649 28 1 1.7924 -0.5139 -0.8899 29 1 3.5347 1.7701 0.0322 30 1 1.5616 2.4678 -1.2085 31 1 2.8308 1.0428 2.0582 32 1 3.6523 -0.1123 4.0707 33 1 3.2175 -2.5154 4.3762 34 1 2.4744 -8.7451 3.9868 35 1 0.9525 -8.3620 4.8266 36 1 2.4036 -10.9612 5.2368 37 1 0.9495 -10.4470 6.1254 38 1 2.1846 -10.6501 8.2655 39 1 2.1867 -12.1932 7.3778 40 1 5.5187 -11.8733 8.6130 41 1 5.6781 -9.7208 7.3764 42 1 4.2237 -9.2064 8.2648 43 1 4.4427 -9.5175 5.2355 44 1 4.4413 -7.9746 6.1232 45 1 1.1409 -2.6073 0.6421 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_5054142_16737258.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 07:17:20 Heat of formation + Delta-G solvation = -273.669490 kcal Electronic energy + Delta-G solvation = -32377.639541 eV Core-core repulsion = 27384.051294 eV Total energy + Delta-G solvation = -4993.588247 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.136 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -50.88888 -48.88898 -42.03628 -41.37670 -40.23920 -39.36052 -38.17747 -37.36900 -36.74741 -32.65517 -32.32094 -31.98748 -31.80727 -29.27627 -27.09980 -26.64865 -24.10479 -23.93668 -23.69348 -22.48663 -22.28926 -21.09990 -20.51629 -19.79827 -19.73181 -18.74449 -18.28436 -18.12128 -17.71083 -17.56997 -17.38396 -16.67333 -16.38071 -16.23754 -16.00320 -15.87131 -15.61747 -15.39670 -15.34364 -15.27144 -15.10975 -14.98918 -14.86451 -14.53797 -14.34323 -14.21819 -14.06634 -13.80800 -13.38864 -13.30721 -13.15067 -13.02887 -12.83553 -12.75874 -12.31870 -12.25212 -12.07114 -11.99897 -11.87409 -11.81421 -11.73333 -11.25722 -10.82269 -10.56697 -10.09927 -9.67698 -5.08708 -0.02718 -0.01873 0.14004 0.29010 1.20140 1.57669 1.60558 1.92166 1.93537 2.43985 2.66147 3.04992 3.13545 3.35959 3.41444 3.49522 3.50628 3.53940 3.57892 3.84986 3.85354 3.94763 3.98130 4.03377 4.08445 4.15841 4.16662 4.26393 4.30645 4.34335 4.34796 4.44470 4.60916 4.69038 4.77401 4.80930 4.89962 4.93459 4.93675 5.00077 5.01482 5.13120 5.15095 5.23251 5.26814 5.30385 5.81722 5.91417 6.50381 6.63653 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.070 4.070 3 Si 0.692 3.308 4 C -0.085 4.085 5 C -0.135 4.135 6 C -0.073 4.073 7 C -0.185 4.185 8 C 0.100 3.900 9 O -0.287 6.287 10 C 0.468 3.532 11 F -0.163 7.163 12 F -0.164 7.164 13 C 0.463 3.537 14 O -0.432 6.432 15 O -0.329 6.329 16 C 0.070 3.930 17 C -0.090 4.090 18 H 0.090 0.910 19 C -0.110 4.110 20 C -0.111 4.111 21 C 0.102 3.898 22 H 0.055 0.945 23 O -0.569 6.569 24 C -0.152 4.152 25 C -0.115 4.115 26 C -0.099 4.099 27 H 0.380 0.620 28 H 0.117 0.883 29 H -0.256 1.256 30 H -0.253 1.253 31 H 0.135 0.865 32 H 0.139 0.861 33 H 0.136 0.864 34 H 0.083 0.917 35 H 0.084 0.916 36 H 0.071 0.929 37 H 0.077 0.923 38 H 0.073 0.927 39 H 0.075 0.925 40 H 0.379 0.621 41 H 0.068 0.932 42 H 0.073 0.927 43 H 0.067 0.933 44 H 0.075 0.925 45 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.507 1.283 2.887 3.500 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.181 4.181 3 Si 0.594 3.406 4 C -0.086 4.086 5 C -0.152 4.152 6 C -0.091 4.091 7 C -0.204 4.204 8 C 0.058 3.942 9 O -0.205 6.205 10 C 0.393 3.607 11 F -0.144 7.144 12 F -0.145 7.145 13 C 0.298 3.702 14 O -0.315 6.315 15 O -0.245 6.245 16 C -0.003 4.003 17 C -0.108 4.108 18 H 0.109 0.891 19 C -0.147 4.147 20 C -0.149 4.149 21 C 0.043 3.957 22 H 0.073 0.927 23 O -0.374 6.374 24 C -0.190 4.190 25 C -0.153 4.153 26 C -0.118 4.118 27 H 0.228 0.772 28 H 0.135 0.865 29 H -0.181 1.181 30 H -0.178 1.178 31 H 0.152 0.848 32 H 0.156 0.844 33 H 0.154 0.846 34 H 0.101 0.899 35 H 0.103 0.897 36 H 0.090 0.910 37 H 0.096 0.904 38 H 0.092 0.908 39 H 0.094 0.906 40 H 0.227 0.773 41 H 0.087 0.913 42 H 0.092 0.908 43 H 0.085 0.915 44 H 0.094 0.906 45 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 1.153 1.190 1.637 2.329 hybrid contribution 0.907 -0.520 -0.031 1.046 sum 2.060 0.670 1.606 2.697 Atomic orbital electron populations 1.86530 1.16740 1.81705 1.49263 1.25145 0.85519 1.10358 0.97058 0.94683 0.81073 0.77521 0.87362 1.20210 0.98137 0.93341 0.96901 1.21063 0.99829 0.99803 0.94533 1.20952 0.97652 0.93228 0.97224 1.21633 1.02349 0.96610 0.99773 1.18902 0.98453 0.80476 0.96371 1.86617 1.73481 1.23073 1.37345 1.20464 0.75397 0.87727 0.77155 1.93233 1.84663 1.83468 1.53085 1.93230 1.29437 1.96102 1.95771 1.22029 0.79047 0.86961 0.82185 1.90836 1.33184 1.72820 1.34622 1.86493 1.71505 1.23902 1.42647 1.23538 1.01388 0.74781 1.00584 1.21329 0.96822 0.95734 0.96951 0.89121 1.21480 1.01334 0.93227 0.98706 1.21438 0.93525 1.01636 0.98273 1.21848 0.94872 0.91208 0.87737 0.92657 1.86519 1.26952 1.79293 1.44686 1.22284 1.01043 0.96592 0.99058 1.21579 0.93929 1.01607 0.98148 1.20271 1.01667 0.93683 0.96173 0.77215 0.86539 1.18079 1.17760 0.84803 0.84356 0.84589 0.89873 0.89745 0.90991 0.90450 0.90797 0.90613 0.77321 0.91343 0.90784 0.91474 0.90628 0.84092 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.05 12.84 -35.23 -0.45 -0.50 16 2 C -0.07 0.03 2.80 36.01 0.10 0.13 16 3 Si 0.69 -1.09 29.80 -169.99 -5.07 -6.15 16 4 C -0.09 -0.02 5.35 -104.64 -0.56 -0.57 16 5 C -0.13 0.13 8.67 -39.56 -0.34 -0.22 16 6 C -0.07 0.04 10.04 -39.60 -0.40 -0.35 16 7 C -0.19 -0.21 8.26 -39.43 -0.33 -0.53 16 8 C 0.10 0.25 6.48 -39.22 -0.25 -0.01 16 9 O -0.29 -0.96 9.60 -39.39 -0.38 -1.34 16 10 C 0.47 0.99 2.16 36.01 0.08 1.07 16 11 F -0.16 -0.28 15.30 2.25 0.03 -0.24 16 12 F -0.16 -0.29 15.29 2.25 0.03 -0.25 16 13 C 0.46 1.02 7.47 36.01 0.27 1.29 16 14 O -0.43 -1.83 16.25 -25.48 -0.41 -2.25 16 15 O -0.33 -0.20 9.76 -39.27 -0.38 -0.58 16 16 C 0.07 -0.09 4.84 37.16 0.18 0.09 16 17 C -0.09 0.19 2.43 -90.62 -0.22 -0.03 16 18 H 0.09 -0.17 8.14 -51.93 -0.42 -0.60 16 19 C -0.11 0.29 5.20 -26.73 -0.14 0.15 16 20 C -0.11 0.13 5.57 -26.73 -0.15 -0.01 16 21 C 0.10 -0.10 3.47 -26.73 -0.09 -0.20 16 22 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 23 O -0.57 -0.25 13.32 -35.23 -0.47 -0.72 16 24 C -0.15 0.27 5.55 -26.71 -0.15 0.12 16 25 C -0.12 0.23 5.11 -26.71 -0.14 0.09 16 26 C -0.10 -0.17 9.63 -39.43 -0.38 -0.55 16 27 H 0.38 -1.47 8.70 45.56 0.40 -1.07 16 28 H 0.12 -0.01 7.96 -51.93 -0.41 -0.43 16 29 H -0.26 -0.18 7.11 56.52 0.40 0.22 16 30 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 31 H 0.13 -0.44 4.90 -52.49 -0.26 -0.70 16 32 H 0.14 -0.42 8.06 -52.49 -0.42 -0.84 16 33 H 0.14 0.08 5.10 -52.49 -0.27 -0.19 16 34 H 0.08 -0.14 8.13 -51.93 -0.42 -0.56 16 35 H 0.08 -0.15 8.13 -51.93 -0.42 -0.57 16 36 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 37 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 38 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 39 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 40 H 0.38 -1.26 9.08 45.56 0.41 -0.85 16 41 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 42 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 43 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 44 H 0.08 -0.10 7.82 -51.93 -0.41 -0.51 16 45 H 0.14 0.23 8.06 -52.48 -0.42 -0.19 16 LS Contribution 378.62 15.07 5.71 5.71 Total: 0.00 -7.48 378.62 -9.13 -16.62 By element: Atomic # 1 Polarization: -5.52 SS G_CDS: -5.23 Total: -10.74 kcal Atomic # 6 Polarization: 2.98 SS G_CDS: -2.52 Total: 0.47 kcal Atomic # 8 Polarization: -3.30 SS G_CDS: -2.10 Total: -5.40 kcal Atomic # 9 Polarization: -0.57 SS G_CDS: 0.07 Total: -0.50 kcal Atomic # 14 Polarization: -1.09 SS G_CDS: -5.07 Total: -6.15 kcal Total LS contribution 5.71 Total: 5.71 kcal Total: -7.48 -9.13 -16.62 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_5054142_16737258.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -257.054 kcal (2) G-P(sol) polarization free energy of solvation -7.482 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -264.536 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.133 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.615 kcal (6) G-S(sol) free energy of system = (1) + (5) -273.669 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds