Wall clock time and date at job start Sat Mar 6 2021 07:57:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.52996 * 109.46782 * 2 1 4 4 C 1.52998 * 109.47107 * 240.00162 * 2 1 3 5 5 O 1.42902 * 109.46899 * 120.00091 * 2 1 3 6 6 C 1.42898 * 113.99945 * 60.00361 * 5 2 1 7 7 H 1.09002 * 112.85240 * 20.32953 * 6 5 2 8 8 C 1.53781 * 113.61632 * 151.52718 * 6 5 2 9 9 C 1.53777 * 87.08336 * 140.05947 * 8 6 5 10 10 H 1.09003 * 113.60961 * 89.20081 * 9 8 6 11 11 C 1.53002 * 113.61665 * 220.01809 * 9 8 6 12 12 O 1.45193 * 109.47124 * 185.00394 * 11 9 8 13 13 C 1.34798 * 117.00083 * 180.02562 * 12 11 9 14 14 O 1.21566 * 119.99686 * 359.97438 * 13 12 11 15 15 C 1.47028 * 120.00359 * 180.02562 * 13 12 11 16 16 C 1.36109 * 123.47593 * 0.02562 * 15 13 12 17 17 S 1.70442 * 110.81040 * 180.02562 * 16 15 13 18 18 C 1.75498 * 92.45244 * 359.97438 * 17 16 15 19 19 C 1.50707 * 124.70053 * 180.02562 * 18 17 16 20 20 O 1.42900 * 109.47177 * 244.98102 * 19 18 17 21 21 Si 1.86307 * 109.46799 * 4.97669 * 19 18 17 22 22 C 1.32741 * 110.60159 * 359.71590 * 18 17 16 23 23 C 1.53775 * 87.07992 * 334.56762 * 9 8 6 24 24 H 1.09006 * 109.47260 * 300.00056 * 1 2 3 25 25 H 1.09002 * 109.47423 * 59.99892 * 1 2 3 26 26 H 1.09004 * 109.47100 * 179.97438 * 1 2 3 27 27 H 1.08998 * 109.46956 * 180.02562 * 3 2 1 28 28 H 1.08999 * 109.47919 * 299.99993 * 3 2 1 29 29 H 1.08997 * 109.47484 * 60.00535 * 3 2 1 30 30 H 1.09004 * 109.47024 * 299.99904 * 4 2 1 31 31 H 1.09002 * 109.47023 * 59.99700 * 4 2 1 32 32 H 1.08998 * 109.47079 * 179.97438 * 4 2 1 33 33 H 1.08997 * 113.61673 * 254.61496 * 8 6 5 34 34 H 1.09009 * 113.61202 * 25.42726 * 8 6 5 35 35 H 1.09003 * 109.47196 * 305.00417 * 11 9 8 36 36 H 1.09000 * 109.46667 * 65.00012 * 11 9 8 37 37 H 1.08007 * 124.59500 * 0.03926 * 16 15 13 38 38 H 1.08999 * 109.47274 * 124.97438 * 19 18 17 39 39 H 0.96693 * 114.00460 * 59.99297 * 20 19 18 40 40 H 1.48497 * 109.99564 * 180.02562 * 21 19 18 41 41 H 1.48496 * 109.99939 * 301.31653 * 21 19 18 42 42 H 1.08004 * 123.45569 * 180.24869 * 22 18 17 43 43 H 1.08993 * 113.61636 * 270.87622 * 23 9 8 44 44 H 1.09008 * 113.61006 * 139.97865 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2492 5 8 2.0063 -0.6737 1.1668 6 6 1.5847 -2.0355 1.2644 7 1 1.2773 -2.4533 0.3057 8 6 2.5660 -2.9302 2.0400 9 6 1.3339 -3.6029 2.6678 10 1 0.9589 -4.4500 2.0935 11 6 1.5002 -3.9204 4.1552 12 8 0.3399 -4.6555 4.6259 13 6 0.3284 -5.0143 5.9252 14 8 1.2631 -4.7211 6.6450 15 6 -0.8141 -5.7613 6.4715 16 6 -1.8955 -6.1272 5.7304 17 16 -3.0241 -6.9765 6.6843 18 6 -2.0245 -6.8424 8.1206 19 6 -2.3869 -7.3993 9.4732 20 8 -2.5628 -6.3251 10.3991 21 14 -3.9713 -8.3705 9.3406 22 6 -0.9018 -6.1882 7.8489 23 6 0.5782 -2.2909 2.3987 24 1 -0.3634 0.5139 0.8900 25 1 -0.3634 0.5138 -0.8900 26 1 -0.3633 -1.0277 -0.0005 27 1 3.1299 1.4425 -0.0005 28 1 1.6766 1.9564 -0.8899 29 1 1.6767 1.9563 0.8900 30 1 1.6766 -1.7489 -1.2493 31 1 1.6766 -0.2074 -2.1392 32 1 3.1300 -0.7208 -1.2495 33 1 3.1487 -3.5946 1.4021 34 1 3.1804 -2.3853 2.7569 35 1 2.3961 -4.5243 4.2999 36 1 1.5939 -2.9910 4.7169 37 1 -2.0212 -5.9092 4.6801 38 1 -1.5881 -8.0533 9.8229 39 1 -3.2594 -5.7021 10.1510 40 1 -4.3399 -8.9245 10.6681 41 1 -5.0611 -7.4979 8.8346 42 1 -0.1347 -5.9915 8.5832 43 1 0.6480 -1.5716 3.2146 44 1 -0.4439 -2.4394 2.0503 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_6894092_14598394.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 07:57:14 Heat of formation + Delta-G solvation = -110.649025 kcal Electronic energy + Delta-G solvation = -25087.155065 eV Core-core repulsion = 21291.840686 eV Total energy + Delta-G solvation = -3795.314378 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 327.127 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -41.50000 -40.78956 -39.18185 -38.49212 -37.43520 -36.95697 -33.91455 -32.09524 -29.75747 -28.43094 -28.35451 -27.04000 -26.68788 -26.04850 -23.64369 -22.33421 -20.92875 -20.84636 -20.41864 -18.93937 -18.56001 -17.89077 -17.60713 -17.37620 -17.23337 -16.56647 -16.40557 -15.98218 -15.79983 -15.49744 -14.96119 -14.77805 -14.59619 -14.17198 -14.15032 -14.03133 -13.71419 -13.57725 -13.49131 -13.35893 -13.14781 -13.04693 -12.84870 -12.73500 -12.69046 -12.43771 -12.40807 -12.20044 -11.98410 -11.80982 -11.74910 -11.35910 -11.29923 -11.18186 -10.81465 -10.37450 -10.10239 -9.65367 -5.14818 -0.46773 0.24768 0.60400 0.69705 1.11547 1.46311 1.64313 1.83619 2.07724 2.69007 3.20487 3.38397 3.49041 3.52930 3.67657 3.72936 3.84360 3.88178 3.93013 3.97849 4.04852 4.11207 4.20751 4.22516 4.41350 4.46839 4.48567 4.52987 4.61648 4.66811 4.71623 4.72596 4.75776 4.78754 4.86219 4.88714 4.92731 4.96028 5.06713 5.09642 5.14097 5.25951 5.27886 5.33573 5.45738 6.25698 6.38995 6.80620 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C 0.105 3.895 3 C -0.139 4.139 4 C -0.179 4.179 5 O -0.361 6.361 6 C 0.062 3.938 7 H 0.093 0.907 8 C -0.126 4.126 9 C -0.111 4.111 10 H 0.105 0.895 11 C 0.082 3.918 12 O -0.352 6.352 13 C 0.528 3.472 14 O -0.502 6.502 15 C -0.152 4.152 16 C -0.174 4.174 17 S 0.208 5.792 18 C -0.245 4.245 19 C -0.033 4.033 20 O -0.522 6.522 21 Si 0.650 3.350 22 C -0.050 4.050 23 C -0.149 4.149 24 H 0.064 0.936 25 H 0.066 0.934 26 H 0.058 0.942 27 H 0.063 0.937 28 H 0.071 0.929 29 H 0.063 0.937 30 H 0.059 0.941 31 H 0.068 0.932 32 H 0.065 0.935 33 H 0.079 0.921 34 H 0.095 0.905 35 H 0.075 0.925 36 H 0.075 0.925 37 H 0.182 0.818 38 H 0.129 0.871 39 H 0.378 0.622 40 H -0.233 1.233 41 H -0.238 1.238 42 H 0.159 0.841 43 H 0.091 0.909 44 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.249 -2.241 -4.860 6.261 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.066 3.934 3 C -0.196 4.196 4 C -0.236 4.236 5 O -0.280 6.280 6 C 0.004 3.996 7 H 0.110 0.890 8 C -0.164 4.164 9 C -0.129 4.129 10 H 0.123 0.877 11 C 0.008 3.992 12 O -0.269 6.269 13 C 0.371 3.629 14 O -0.391 6.391 15 C -0.168 4.168 16 C -0.312 4.312 17 S 0.474 5.526 18 C -0.361 4.361 19 C -0.145 4.145 20 O -0.329 6.329 21 Si 0.549 3.451 22 C -0.079 4.079 23 C -0.187 4.187 24 H 0.083 0.917 25 H 0.085 0.915 26 H 0.077 0.923 27 H 0.083 0.917 28 H 0.089 0.911 29 H 0.082 0.918 30 H 0.078 0.922 31 H 0.087 0.913 32 H 0.084 0.916 33 H 0.097 0.903 34 H 0.113 0.887 35 H 0.093 0.907 36 H 0.093 0.907 37 H 0.199 0.801 38 H 0.146 0.854 39 H 0.226 0.774 40 H -0.156 1.156 41 H -0.162 1.162 42 H 0.176 0.824 43 H 0.110 0.890 44 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -4.597 -3.078 -4.252 6.978 hybrid contribution 1.317 1.769 0.195 2.214 sum -3.281 -1.310 -4.057 5.379 Atomic orbital electron populations 1.22471 0.95471 1.02502 1.02907 1.21541 0.93246 0.93290 0.85371 1.21769 1.02033 0.93213 1.02619 1.22470 1.02351 1.00841 0.97983 1.88043 1.73810 1.23256 1.42916 1.23565 0.95541 0.82923 0.97562 0.88962 1.23220 0.96261 0.97380 0.99497 1.22360 0.98694 0.98145 0.93729 0.87663 1.23101 0.86128 0.95956 0.94006 1.86521 1.45582 1.68089 1.26741 1.20371 0.85570 0.76741 0.80266 1.90890 1.36251 1.52383 1.59582 1.19414 0.95381 1.07668 0.94332 1.26072 0.98048 1.01403 1.05649 1.83230 1.19928 1.51112 0.98328 1.24719 1.00208 1.10496 1.00695 1.24417 1.11629 0.93710 0.84721 1.86648 1.59432 1.38882 1.47930 0.95251 0.76102 0.85951 0.87840 1.21003 0.97435 0.95669 0.93770 1.23647 0.98913 0.96393 0.99746 0.91680 0.91540 0.92291 0.91744 0.91059 0.91756 0.92224 0.91346 0.91580 0.90271 0.88660 0.90664 0.90655 0.80071 0.85354 0.77405 1.15619 1.16172 0.82396 0.89050 0.90908 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.11 8.36 37.16 0.31 0.42 16 2 C 0.10 0.02 1.12 -90.62 -0.10 -0.08 16 3 C -0.14 0.03 8.84 37.16 0.33 0.36 16 4 C -0.18 0.14 8.38 37.16 0.31 0.45 16 5 O -0.36 -0.63 10.00 -35.23 -0.35 -0.98 16 6 C 0.06 -0.01 2.80 -25.92 -0.07 -0.08 16 7 H 0.09 -0.11 5.59 -51.93 -0.29 -0.40 16 8 C -0.13 0.09 7.47 -25.92 -0.19 -0.11 16 9 C -0.11 0.08 4.02 -89.81 -0.36 -0.28 16 10 H 0.11 -0.16 8.14 -51.93 -0.42 -0.58 16 11 C 0.08 0.08 5.31 37.16 0.20 0.28 16 12 O -0.35 -0.75 9.87 -40.76 -0.40 -1.16 16 13 C 0.53 1.93 7.92 34.29 0.27 2.20 16 14 O -0.50 -3.25 16.59 -19.32 -0.32 -3.57 16 15 C -0.15 -0.27 5.98 -104.65 -0.63 -0.90 16 16 C -0.17 0.10 10.56 29.97 0.32 0.42 16 17 S 0.21 -0.35 20.19 -107.50 -2.17 -2.52 16 18 C -0.24 0.08 5.65 -36.18 -0.20 -0.13 16 19 C -0.03 0.03 2.94 36.01 0.11 0.13 16 20 O -0.52 -0.37 12.88 -35.23 -0.45 -0.83 16 21 Si 0.65 -1.16 30.92 -169.99 -5.26 -6.42 16 22 C -0.05 -0.07 9.95 -39.01 -0.39 -0.46 16 23 C -0.15 0.05 7.39 -25.92 -0.19 -0.14 16 24 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 25 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 26 H 0.06 -0.05 7.02 -51.93 -0.36 -0.42 16 27 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 28 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 29 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 30 H 0.06 -0.07 6.23 -51.93 -0.32 -0.40 16 31 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 32 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 33 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 34 H 0.09 0.00 8.10 -51.92 -0.42 -0.42 16 35 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 36 H 0.08 0.11 7.84 -51.93 -0.41 -0.29 16 37 H 0.18 -0.43 8.02 -52.48 -0.42 -0.85 16 38 H 0.13 -0.21 7.96 -51.93 -0.41 -0.63 16 39 H 0.38 -0.85 8.70 45.56 0.40 -0.45 16 40 H -0.23 -0.27 7.11 56.52 0.40 0.14 16 41 H -0.24 0.09 7.11 56.52 0.40 0.49 16 42 H 0.16 0.32 8.06 -52.48 -0.42 -0.10 16 43 H 0.09 0.07 7.90 -51.93 -0.41 -0.34 16 44 H 0.07 -0.06 8.14 -51.92 -0.42 -0.48 16 LS Contribution 376.33 15.07 5.67 5.67 Total: 0.00 -6.11 376.33 -10.50 -16.61 By element: Atomic # 1 Polarization: -1.95 SS G_CDS: -6.92 Total: -8.88 kcal Atomic # 6 Polarization: 2.37 SS G_CDS: -0.30 Total: 2.07 kcal Atomic # 8 Polarization: -5.01 SS G_CDS: -1.53 Total: -6.54 kcal Atomic # 14 Polarization: -1.16 SS G_CDS: -5.26 Total: -6.42 kcal Atomic # 16 Polarization: -0.35 SS G_CDS: -2.17 Total: -2.52 kcal Total LS contribution 5.67 Total: 5.67 kcal Total: -6.11 -10.50 -16.61 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_6894092_14598394.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.038 kcal (2) G-P(sol) polarization free energy of solvation -6.106 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -100.144 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.505 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.611 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.649 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds