Wall clock time and date at job start Sat Mar 6 2021 08:24:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53003 * 109.47297 * 2 1 4 4 C 1.52999 * 109.46735 * 240.00535 * 2 1 3 5 5 O 1.45197 * 109.47503 * 120.00312 * 2 1 3 6 6 C 1.34642 * 116.99749 * 59.99667 * 5 2 1 7 7 O 1.21504 * 120.00187 * 0.02562 * 6 5 2 8 8 N 1.34779 * 119.99445 * 180.02562 * 6 5 2 9 9 C 1.46496 * 119.99390 * 180.02562 * 8 6 5 10 10 H 1.09000 * 112.91246 * 23.74616 * 9 8 6 11 11 C 1.53786 * 113.61518 * 154.99856 * 9 8 6 12 12 C 1.53781 * 87.17350 * 89.15486 * 11 9 8 13 13 H 1.08996 * 113.61580 * 270.76247 * 12 11 9 14 14 C 1.53003 * 113.61480 * 139.93948 * 12 11 9 15 15 O 1.45192 * 109.46942 * 175.00009 * 14 12 11 16 16 C 1.34799 * 116.99993 * 180.02562 * 15 14 12 17 17 O 1.21568 * 119.99859 * 359.97438 * 16 15 14 18 18 C 1.47030 * 120.00521 * 180.02562 * 16 15 14 19 19 C 1.36109 * 123.47298 * 0.02562 * 18 16 15 20 20 S 1.70447 * 110.80743 * 179.97438 * 19 18 16 21 21 C 1.75504 * 92.45542 * 0.02562 * 20 19 18 22 22 C 1.50691 * 124.69834 * 180.02562 * 21 20 19 23 23 O 1.42911 * 109.47156 * 119.98131 * 22 21 20 24 24 Si 1.86299 * 109.47306 * 359.97438 * 22 21 20 25 25 C 1.32742 * 110.59810 * 359.75593 * 21 20 19 26 26 C 1.53782 * 87.08260 * 25.39213 * 12 11 9 27 27 H 1.09005 * 109.46599 * 299.99813 * 1 2 3 28 28 H 1.08993 * 109.47218 * 59.99239 * 1 2 3 29 29 H 1.08990 * 109.47258 * 179.97438 * 1 2 3 30 30 H 1.08993 * 109.47314 * 180.02562 * 3 2 1 31 31 H 1.09003 * 109.47128 * 300.00671 * 3 2 1 32 32 H 1.09007 * 109.46749 * 60.00158 * 3 2 1 33 33 H 1.08997 * 109.47164 * 299.99536 * 4 2 1 34 34 H 1.08998 * 109.47768 * 60.00047 * 4 2 1 35 35 H 1.09006 * 109.47244 * 180.02562 * 4 2 1 36 36 H 0.97001 * 120.00492 * 359.97438 * 8 6 5 37 37 H 1.09002 * 113.61357 * 334.56403 * 11 9 8 38 38 H 1.09002 * 113.61608 * 203.74565 * 11 9 8 39 39 H 1.08994 * 109.47052 * 295.00030 * 14 12 11 40 40 H 1.09002 * 109.46569 * 54.99962 * 14 12 11 41 41 H 1.08001 * 124.59750 * 359.95572 * 19 18 16 42 42 H 1.08995 * 109.47413 * 239.97497 * 22 21 20 43 43 H 0.96702 * 113.99495 * 300.00345 * 23 22 21 44 44 H 1.48499 * 109.99712 * 179.97438 * 24 22 21 45 45 H 1.48499 * 110.00031 * 301.31700 * 24 22 21 46 46 H 1.07999 * 123.45683 * 180.21308 * 25 21 20 47 47 H 1.08997 * 113.61668 * 89.11298 * 26 12 11 48 48 H 1.08998 * 113.61674 * 219.93807 * 26 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0399 -0.7211 -1.2493 5 8 2.0141 -0.6845 1.1855 6 6 1.6523 -1.9724 1.3382 7 8 0.9516 -2.5097 0.5035 8 7 2.0673 -2.6655 2.4170 9 6 1.6741 -4.0669 2.5829 10 1 1.4213 -4.5512 1.6397 11 6 2.6472 -4.8811 3.4519 12 6 1.8065 -4.4482 4.6646 13 1 2.1362 -3.5107 5.1122 14 6 1.6014 -5.5594 5.6963 15 8 0.9021 -5.0247 6.8509 16 6 0.6415 -5.8807 7.8590 17 8 0.9890 -7.0426 7.7750 18 6 -0.0640 -5.4095 9.0599 19 6 -0.4858 -4.1263 9.2277 20 16 -1.2642 -3.9367 10.7322 21 6 -1.0207 -5.6224 11.1557 22 6 -1.4758 -6.2575 12.4443 23 8 -2.3868 -7.3202 12.1559 24 14 -2.3264 -4.9797 13.5000 25 6 -0.3853 -6.2617 10.1813 26 6 0.6276 -4.2868 3.6905 27 1 -0.3633 0.5138 0.8901 28 1 -0.3633 0.5139 -0.8898 29 1 -0.3633 -1.0276 -0.0005 30 1 3.1300 1.4425 -0.0005 31 1 1.6766 1.9564 -0.8899 32 1 1.6767 1.9563 0.8901 33 1 1.6766 -1.7488 -1.2494 34 1 1.6766 -0.2073 -2.1393 35 1 3.1300 -0.7216 -1.2492 36 1 2.6270 -2.2367 3.0832 37 1 3.6623 -4.4839 3.4601 38 1 2.6138 -5.9531 3.2577 39 1 1.0113 -6.3617 5.2535 40 1 2.5704 -5.9499 6.0071 41 1 -0.3461 -3.3355 8.5056 42 1 -0.6126 -6.6541 12.9787 43 1 -3.1805 -7.0395 11.6801 44 1 -2.7805 -5.5937 14.7735 45 1 -1.3994 -3.8539 13.7805 46 1 -0.1318 -7.3107 10.2237 47 1 0.0409 -5.1962 3.5606 48 1 0.0113 -3.4107 3.8921 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_6894092_15734084.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 08:24:33 Heat of formation + Delta-G solvation = -139.107902 kcal Electronic energy + Delta-G solvation = -30431.450182 eV Core-core repulsion = 25967.029872 eV Total energy + Delta-G solvation = -4464.420310 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.137 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -41.91050 -41.43968 -40.40174 -39.09432 -37.92633 -37.41828 -37.00441 -35.26735 -34.08278 -32.08029 -29.75355 -28.33150 -28.28963 -27.07152 -26.92191 -26.19773 -24.46162 -23.14850 -22.34952 -21.10194 -20.77773 -20.29143 -19.25680 -18.91101 -18.58578 -17.69593 -17.54138 -17.48019 -17.28739 -17.06992 -16.61977 -16.32520 -15.93813 -15.52721 -15.37653 -15.33985 -15.19832 -14.83618 -14.56429 -14.37395 -14.17517 -13.89072 -13.84211 -13.69289 -13.48314 -13.41157 -13.31405 -13.05507 -12.85590 -12.83026 -12.75828 -12.45209 -12.30821 -12.26956 -12.18377 -12.04004 -11.89203 -11.81362 -11.36269 -11.30698 -11.25519 -10.97636 -10.70300 -10.19713 -10.09257 -9.66403 -5.24966 -0.48736 0.22381 0.58686 0.67889 1.10868 1.14589 1.49253 1.60656 1.82404 1.86293 2.04769 3.08335 3.23712 3.25158 3.32118 3.52230 3.58567 3.63426 3.77373 3.83053 3.87843 3.96831 3.97072 4.08998 4.19279 4.27499 4.33870 4.37896 4.48535 4.54543 4.55279 4.56524 4.62857 4.65042 4.75258 4.77945 4.84692 4.86291 4.89924 4.92981 4.93183 4.98516 5.08635 5.11263 5.33035 5.36464 5.40244 5.48294 5.60201 6.39246 6.41123 6.76704 7.41412 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.653 3.347 7 O -0.564 6.564 8 N -0.695 5.695 9 C 0.138 3.862 10 H 0.112 0.888 11 C -0.135 4.135 12 C -0.113 4.113 13 H 0.104 0.896 14 C 0.078 3.922 15 O -0.352 6.352 16 C 0.529 3.471 17 O -0.502 6.502 18 C -0.153 4.153 19 C -0.173 4.173 20 S 0.208 5.792 21 C -0.247 4.247 22 C -0.025 4.025 23 O -0.533 6.533 24 Si 0.654 3.346 25 C -0.051 4.051 26 C -0.146 4.146 27 H 0.060 0.940 28 H 0.072 0.928 29 H 0.087 0.913 30 H 0.067 0.933 31 H 0.082 0.918 32 H 0.067 0.933 33 H 0.087 0.913 34 H 0.072 0.928 35 H 0.060 0.940 36 H 0.407 0.593 37 H 0.083 0.917 38 H 0.104 0.896 39 H 0.076 0.924 40 H 0.075 0.925 41 H 0.182 0.818 42 H 0.125 0.875 43 H 0.381 0.619 44 H -0.231 1.231 45 H -0.236 1.236 46 H 0.159 0.841 47 H 0.097 0.903 48 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.116 4.744 0.616 4.912 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.279 6.279 6 C 0.407 3.593 7 O -0.452 6.452 8 N -0.354 5.354 9 C 0.033 3.967 10 H 0.130 0.870 11 C -0.173 4.173 12 C -0.131 4.131 13 H 0.122 0.878 14 C 0.005 3.995 15 O -0.269 6.269 16 C 0.371 3.629 17 O -0.391 6.391 18 C -0.169 4.169 19 C -0.311 4.311 20 S 0.474 5.526 21 C -0.364 4.364 22 C -0.139 4.139 23 O -0.339 6.339 24 Si 0.553 3.447 25 C -0.079 4.079 26 C -0.185 4.185 27 H 0.079 0.921 28 H 0.091 0.909 29 H 0.106 0.894 30 H 0.086 0.914 31 H 0.101 0.899 32 H 0.086 0.914 33 H 0.106 0.894 34 H 0.091 0.909 35 H 0.079 0.921 36 H 0.242 0.758 37 H 0.102 0.898 38 H 0.123 0.877 39 H 0.094 0.906 40 H 0.093 0.907 41 H 0.199 0.801 42 H 0.142 0.858 43 H 0.229 0.771 44 H -0.154 1.154 45 H -0.160 1.160 46 H 0.176 0.824 47 H 0.115 0.885 48 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -1.581 5.529 1.888 6.052 hybrid contribution 1.572 -1.329 -0.841 2.224 sum -0.008 4.200 1.046 4.328 Atomic orbital electron populations 1.22520 0.93810 1.05066 1.02722 1.22128 0.94470 0.91553 0.81830 1.21880 1.02336 0.92336 1.03348 1.22525 1.01616 1.03459 0.96544 1.86306 1.71492 1.23359 1.46785 1.18060 0.78652 0.80656 0.81977 1.90921 1.40778 1.70356 1.43193 1.44352 1.55480 1.11796 1.23737 1.21786 0.95687 0.79515 0.99703 0.86996 1.23370 0.98853 1.01519 0.93584 1.22710 0.98185 0.99107 0.93105 0.87801 1.23146 0.96802 0.96407 0.83189 1.86532 1.70580 1.42442 1.27349 1.20370 0.76528 0.83669 0.82308 1.90890 1.49607 1.18467 1.80155 1.19410 1.08372 0.93729 0.95417 1.26069 1.01450 1.00580 1.03019 1.83181 1.53245 1.07349 1.08827 1.24784 1.10537 0.98030 1.03000 1.24453 0.96798 0.96802 0.95817 1.86547 1.34132 1.33593 1.79616 0.95081 0.86936 0.79010 0.83661 1.20986 0.95952 1.00929 0.90051 1.23607 0.96587 1.03499 0.94804 0.92119 0.90912 0.89413 0.91391 0.89910 0.91394 0.89421 0.90902 0.92110 0.75818 0.89825 0.87721 0.90551 0.90697 0.80078 0.85788 0.77084 1.15401 1.15965 0.82384 0.88488 0.90360 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.21 8.37 37.16 0.31 0.10 16 2 C 0.14 0.16 1.13 -90.62 -0.10 0.05 16 3 C -0.14 0.13 8.85 37.16 0.33 0.45 16 4 C -0.18 -0.22 8.37 37.16 0.31 0.09 16 5 O -0.36 -0.79 9.94 -40.33 -0.40 -1.19 16 6 C 0.65 1.64 8.06 54.06 0.44 2.07 16 7 O -0.56 -2.75 11.48 -19.27 -0.22 -2.97 16 8 N -0.70 0.32 5.27 -57.84 -0.30 0.01 16 9 C 0.14 -0.17 4.33 -67.02 -0.29 -0.46 16 10 H 0.11 0.01 7.47 -51.93 -0.39 -0.38 16 11 C -0.14 0.42 7.38 -25.92 -0.19 0.23 16 12 C -0.11 0.26 3.90 -89.80 -0.35 -0.09 16 13 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 14 C 0.08 -0.04 5.31 37.16 0.20 0.16 16 15 O -0.35 -0.45 9.87 -40.76 -0.40 -0.86 16 16 C 0.53 1.59 7.92 34.29 0.27 1.87 16 17 O -0.50 -2.90 16.59 -19.32 -0.32 -3.23 16 18 C -0.15 -0.22 5.98 -104.65 -0.63 -0.84 16 19 C -0.17 0.15 10.56 29.97 0.32 0.46 16 20 S 0.21 -0.40 20.18 -107.50 -2.17 -2.57 16 21 C -0.25 0.12 5.68 -36.19 -0.21 -0.08 16 22 C -0.03 0.03 2.95 36.00 0.11 0.13 16 23 O -0.53 0.20 12.85 -35.23 -0.45 -0.26 16 24 Si 0.65 -1.29 30.91 -169.99 -5.25 -6.55 16 25 C -0.05 -0.06 9.91 -39.01 -0.39 -0.45 16 26 C -0.15 0.23 7.44 -25.82 -0.19 0.04 16 27 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 28 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 29 H 0.09 0.29 5.88 -51.93 -0.31 -0.02 16 30 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 31 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 32 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 33 H 0.09 0.29 5.88 -51.93 -0.31 -0.02 16 34 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 35 H 0.06 0.06 8.14 -51.93 -0.42 -0.37 16 36 H 0.41 -0.97 8.81 -40.82 -0.36 -1.33 16 37 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 38 H 0.10 -0.39 8.10 -51.93 -0.42 -0.81 16 39 H 0.08 -0.03 7.84 -51.93 -0.41 -0.44 16 40 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 41 H 0.18 -0.47 8.02 -52.49 -0.42 -0.89 16 42 H 0.12 -0.10 7.96 -51.93 -0.41 -0.51 16 43 H 0.38 -1.63 8.70 45.56 0.40 -1.23 16 44 H -0.23 -0.20 7.11 56.52 0.40 0.20 16 45 H -0.24 0.04 7.11 56.52 0.40 0.44 16 46 H 0.16 0.30 8.06 -52.49 -0.42 -0.13 16 47 H 0.10 -0.18 7.90 -51.93 -0.41 -0.59 16 48 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 LS Contribution 411.60 15.07 6.20 6.20 Total: 0.00 -8.20 411.60 -10.69 -18.90 By element: Atomic # 1 Polarization: -3.93 SS G_CDS: -7.30 Total: -11.24 kcal Atomic # 6 Polarization: 3.81 SS G_CDS: -0.07 Total: 3.74 kcal Atomic # 7 Polarization: 0.32 SS G_CDS: -0.30 Total: 0.01 kcal Atomic # 8 Polarization: -6.70 SS G_CDS: -1.80 Total: -8.50 kcal Atomic # 14 Polarization: -1.29 SS G_CDS: -5.25 Total: -6.55 kcal Atomic # 16 Polarization: -0.40 SS G_CDS: -2.17 Total: -2.57 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -8.20 -10.69 -18.90 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_6894092_15734084.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -120.212 kcal (2) G-P(sol) polarization free energy of solvation -8.203 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -128.415 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.693 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.896 kcal (6) G-S(sol) free energy of system = (1) + (5) -139.108 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds