Wall clock time and date at job start Sat Mar 6 2021 08:24:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.53003 * 109.46715 * 2 1 4 4 C 1.52995 * 109.47035 * 240.00179 * 2 1 3 5 5 O 1.45198 * 109.46919 * 119.99864 * 2 1 3 6 6 C 1.34639 * 117.00014 * 60.00914 * 5 2 1 7 7 O 1.21510 * 119.99686 * 359.97438 * 6 5 2 8 8 N 1.34778 * 119.99744 * 179.97438 * 6 5 2 9 9 C 1.46503 * 119.99675 * 179.97438 * 8 6 5 10 10 H 1.09004 * 112.90755 * 23.74576 * 9 8 6 11 11 C 1.53775 * 113.61366 * 154.99609 * 9 8 6 12 12 C 1.53778 * 87.08012 * 139.98222 * 11 9 8 13 13 H 1.08995 * 113.61373 * 89.20405 * 12 11 9 14 14 C 1.53009 * 113.61228 * 220.02136 * 12 11 9 15 15 O 1.45200 * 109.46787 * 185.00023 * 14 12 11 16 16 C 1.34798 * 116.99781 * 180.02562 * 15 14 12 17 17 O 1.21559 * 120.00257 * 359.97438 * 16 15 14 18 18 C 1.47035 * 119.99745 * 180.02562 * 16 15 14 19 19 C 1.36105 * 123.47693 * 359.97438 * 18 16 15 20 20 S 1.70451 * 110.80200 * 179.76352 * 19 18 16 21 21 C 1.75499 * 92.45863 * 0.30925 * 20 19 18 22 22 C 1.50699 * 124.69885 * 179.97438 * 21 20 19 23 23 O 1.42907 * 109.46603 * 244.70027 * 22 21 20 24 24 Si 1.86298 * 109.47032 * 4.69331 * 22 21 20 25 25 C 1.32741 * 110.59708 * 359.68745 * 21 20 19 26 26 C 1.53779 * 113.61320 * 252.49677 * 9 8 6 27 27 H 1.08998 * 109.47541 * 299.99880 * 1 2 3 28 28 H 1.09005 * 109.47493 * 60.00393 * 1 2 3 29 29 H 1.09010 * 109.47121 * 179.97438 * 1 2 3 30 30 H 1.09000 * 109.46583 * 179.97438 * 3 2 1 31 31 H 1.08999 * 109.47083 * 299.99657 * 3 2 1 32 32 H 1.08997 * 109.47196 * 60.00321 * 3 2 1 33 33 H 1.09000 * 109.47733 * 299.99721 * 4 2 1 34 34 H 1.08999 * 109.47610 * 59.99824 * 4 2 1 35 35 H 1.09003 * 109.47114 * 179.97438 * 4 2 1 36 36 H 0.96994 * 120.00136 * 359.97438 * 8 6 5 37 37 H 1.09003 * 113.61622 * 25.43317 * 11 9 8 38 38 H 1.09000 * 113.69364 * 254.53862 * 11 9 8 39 39 H 1.08991 * 109.47390 * 65.00186 * 14 12 11 40 40 H 1.09001 * 109.47402 * 304.99742 * 14 12 11 41 41 H 1.07996 * 124.59529 * 359.97051 * 19 18 16 42 42 H 1.08996 * 109.47117 * 124.69940 * 22 21 20 43 43 H 0.96697 * 114.00527 * 59.99993 * 23 22 21 44 44 H 1.48506 * 109.99834 * 58.68765 * 24 22 21 45 45 H 1.48502 * 110.00011 * 180.02562 * 24 22 21 46 46 H 1.08000 * 123.45364 * 180.26122 * 25 21 20 47 47 H 1.08995 * 113.61539 * 105.47642 * 26 9 8 48 48 H 1.08995 * 113.61682 * 334.56352 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4426 0.0000 4 6 2.0399 -0.7212 -1.2492 5 8 2.0139 -0.6845 1.1856 6 6 1.6523 -1.9723 1.3383 7 8 0.9511 -2.5095 0.5039 8 7 2.0681 -2.6657 2.4166 9 6 1.6741 -4.0669 2.5831 10 1 1.4199 -4.5510 1.6401 11 6 2.6477 -4.8816 3.4510 12 6 1.4104 -5.5543 4.0685 13 1 1.0850 -6.4459 3.5326 14 6 1.5230 -5.7765 5.5782 15 8 0.3658 -6.5185 6.0458 16 6 0.3100 -6.7988 7.3631 17 8 1.2044 -6.4333 8.1008 18 6 -0.8322 -7.5476 7.9077 19 6 -1.8705 -7.9907 7.1474 20 16 -3.0093 -8.8233 8.1042 21 6 -2.0784 -8.5666 9.5696 22 6 -2.4803 -9.0541 10.9378 23 8 -2.7264 -7.9333 11.7894 24 14 -4.0282 -10.0817 10.8008 25 6 -0.9681 -7.8888 9.3049 26 6 0.6285 -4.2856 3.6893 27 1 -0.3634 0.5138 0.8900 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3634 -1.0278 -0.0005 30 1 3.1299 1.4425 0.0005 31 1 1.6766 1.9563 -0.8900 32 1 1.6766 1.9563 0.8900 33 1 1.6767 -1.7489 -1.2493 34 1 1.6766 -0.2074 -2.1392 35 1 3.1300 -0.7208 -1.2495 36 1 2.6282 -2.2370 3.0825 37 1 3.2139 -4.2756 4.1583 38 1 3.2768 -5.5646 2.8802 39 1 1.5656 -4.8126 6.0851 40 1 2.4293 -6.3417 5.7957 41 1 -1.9591 -7.8386 6.0819 42 1 -1.6777 -9.6603 11.3578 43 1 -3.4303 -7.3486 11.4767 44 1 -3.7948 -11.2330 9.8924 45 1 -4.4354 -10.5680 12.1436 46 1 -0.2408 -7.6205 10.0568 47 1 -0.3731 -4.4872 3.3096 48 1 0.6428 -3.5167 4.4617 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_6894092_15734238.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 08:24:37 Heat of formation + Delta-G solvation = -141.166463 kcal Electronic energy + Delta-G solvation = -30257.509482 eV Core-core repulsion = 25792.999906 eV Total energy + Delta-G solvation = -4464.509576 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.137 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -41.84555 -41.44449 -40.34660 -39.07888 -37.94615 -37.42306 -37.00915 -35.29252 -34.19963 -32.08947 -29.72973 -28.31776 -28.27741 -27.05239 -26.92868 -26.18756 -24.58778 -22.61445 -22.23405 -21.41422 -20.80782 -20.42861 -19.05206 -18.92555 -18.59302 -17.91630 -17.56637 -17.45808 -17.24925 -17.04177 -16.50713 -16.35514 -16.29123 -15.50999 -15.40013 -15.33608 -14.96840 -14.82062 -14.45488 -14.21157 -14.17054 -13.88850 -13.78804 -13.67948 -13.48059 -13.40357 -13.18112 -13.00936 -12.83350 -12.81487 -12.73171 -12.52491 -12.39926 -12.30355 -12.21188 -12.07926 -11.96182 -11.85526 -11.37407 -11.33429 -11.28219 -10.94687 -10.67494 -10.15335 -10.11015 -9.65517 -5.25703 -0.48255 0.23188 0.59046 0.68054 1.10480 1.20082 1.50295 1.61681 1.82711 1.88617 2.04708 3.12247 3.23665 3.26185 3.32134 3.53088 3.59291 3.62104 3.78843 3.84497 3.86395 3.95400 3.98358 4.08018 4.17636 4.19702 4.33924 4.38646 4.48030 4.53140 4.57111 4.57495 4.63939 4.65369 4.73562 4.79097 4.81186 4.87863 4.89097 4.92701 4.94186 5.05539 5.09933 5.12540 5.32875 5.37444 5.40063 5.49136 5.61535 6.41334 6.42584 6.76342 7.43682 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.651 3.349 7 O -0.566 6.566 8 N -0.702 5.702 9 C 0.141 3.859 10 H 0.123 0.877 11 C -0.136 4.136 12 C -0.108 4.108 13 H 0.110 0.890 14 C 0.081 3.919 15 O -0.351 6.351 16 C 0.529 3.471 17 O -0.503 6.503 18 C -0.154 4.154 19 C -0.172 4.172 20 S 0.208 5.792 21 C -0.247 4.247 22 C -0.025 4.025 23 O -0.533 6.533 24 Si 0.656 3.344 25 C -0.051 4.051 26 C -0.148 4.148 27 H 0.060 0.940 28 H 0.072 0.928 29 H 0.087 0.913 30 H 0.067 0.933 31 H 0.082 0.918 32 H 0.067 0.933 33 H 0.087 0.913 34 H 0.072 0.928 35 H 0.060 0.940 36 H 0.407 0.593 37 H 0.093 0.907 38 H 0.086 0.914 39 H 0.075 0.925 40 H 0.076 0.924 41 H 0.183 0.817 42 H 0.125 0.875 43 H 0.381 0.619 44 H -0.236 1.236 45 H -0.231 1.231 46 H 0.158 0.842 47 H 0.080 0.920 48 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.604 0.411 -1.534 3.050 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.280 6.280 6 C 0.404 3.596 7 O -0.455 6.455 8 N -0.360 5.360 9 C 0.037 3.963 10 H 0.141 0.859 11 C -0.174 4.174 12 C -0.127 4.127 13 H 0.128 0.872 14 C 0.007 3.993 15 O -0.268 6.268 16 C 0.372 3.628 17 O -0.392 6.392 18 C -0.170 4.170 19 C -0.310 4.310 20 S 0.474 5.526 21 C -0.364 4.364 22 C -0.139 4.139 23 O -0.339 6.339 24 Si 0.555 3.445 25 C -0.079 4.079 26 C -0.186 4.186 27 H 0.079 0.921 28 H 0.091 0.909 29 H 0.106 0.894 30 H 0.086 0.914 31 H 0.101 0.899 32 H 0.086 0.914 33 H 0.106 0.894 34 H 0.091 0.909 35 H 0.079 0.921 36 H 0.242 0.758 37 H 0.112 0.888 38 H 0.105 0.895 39 H 0.093 0.907 40 H 0.094 0.906 41 H 0.200 0.800 42 H 0.142 0.858 43 H 0.229 0.771 44 H -0.160 1.160 45 H -0.154 1.154 46 H 0.176 0.824 47 H 0.099 0.901 48 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges -3.935 -1.440 -1.663 4.508 hybrid contribution 2.429 1.153 0.441 2.724 sum -1.507 -0.287 -1.222 1.961 Atomic orbital electron populations 1.22522 0.93839 1.05051 1.02700 1.22115 0.94454 0.91562 0.81868 1.21880 1.02331 0.92371 1.03335 1.22521 1.01600 1.03444 0.96549 1.86310 1.71482 1.23488 1.46725 1.18169 0.78675 0.80639 0.82100 1.90913 1.40892 1.70420 1.43291 1.44752 1.55471 1.12116 1.23692 1.22505 0.95533 0.78981 0.99244 0.85909 1.23401 0.96460 0.98837 0.98722 1.22388 0.97923 0.98982 0.93411 0.87168 1.23094 0.86432 0.96023 0.93742 1.86533 1.46347 1.68713 1.25242 1.20368 0.85106 0.76925 0.80421 1.90886 1.38543 1.50272 1.59472 1.19403 0.96154 1.07738 0.93721 1.26078 0.98268 1.00895 1.05765 1.83138 1.22283 1.50748 0.96414 1.24776 1.01083 1.10177 1.00342 1.24455 1.09014 0.94623 0.85771 1.86547 1.60277 1.38669 1.48406 0.95115 0.81600 0.82874 0.84936 1.20990 0.97036 0.96122 0.93760 1.23635 0.99548 0.96882 0.98583 0.92128 0.90942 0.89419 0.91401 0.89928 0.91401 0.89433 0.90934 0.92127 0.75802 0.88824 0.89500 0.90698 0.90602 0.80009 0.85776 0.77108 1.16047 1.15441 0.82446 0.90086 0.89262 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.25 8.37 37.16 0.31 0.06 16 2 C 0.14 0.19 1.13 -90.62 -0.10 0.08 16 3 C -0.14 0.09 8.85 37.16 0.33 0.42 16 4 C -0.18 -0.24 8.37 37.15 0.31 0.07 16 5 O -0.37 -0.89 9.94 -40.32 -0.40 -1.29 16 6 C 0.65 1.76 8.06 54.06 0.44 2.19 16 7 O -0.57 -2.80 11.48 -19.28 -0.22 -3.03 16 8 N -0.70 0.21 5.36 -57.93 -0.31 -0.10 16 9 C 0.14 -0.18 4.24 -67.12 -0.28 -0.47 16 10 H 0.12 -0.01 7.47 -51.93 -0.39 -0.40 16 11 C -0.14 0.42 7.39 -25.92 -0.19 0.23 16 12 C -0.11 0.24 4.02 -89.80 -0.36 -0.12 16 13 H 0.11 -0.28 8.14 -51.93 -0.42 -0.70 16 14 C 0.08 -0.04 5.31 37.16 0.20 0.16 16 15 O -0.35 -0.45 9.87 -40.76 -0.40 -0.85 16 16 C 0.53 1.59 7.92 34.30 0.27 1.86 16 17 O -0.50 -2.88 16.59 -19.31 -0.32 -3.20 16 18 C -0.15 -0.22 5.98 -104.65 -0.63 -0.85 16 19 C -0.17 0.15 10.56 29.97 0.32 0.47 16 20 S 0.21 -0.41 20.19 -107.50 -2.17 -2.58 16 21 C -0.25 0.12 5.65 -36.19 -0.20 -0.08 16 22 C -0.03 0.03 2.94 36.01 0.11 0.13 16 23 O -0.53 0.20 12.88 -35.23 -0.45 -0.26 16 24 Si 0.66 -1.28 30.92 -169.99 -5.26 -6.53 16 25 C -0.05 -0.06 9.95 -39.01 -0.39 -0.45 16 26 C -0.15 0.24 7.43 -25.92 -0.19 0.04 16 27 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 28 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 29 H 0.09 0.30 5.88 -51.92 -0.31 0.00 16 30 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 31 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 32 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 33 H 0.09 0.30 5.88 -51.93 -0.31 -0.01 16 34 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 35 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 36 H 0.41 -0.91 8.84 -40.82 -0.36 -1.27 16 37 H 0.09 -0.36 8.08 -51.93 -0.42 -0.78 16 38 H 0.09 -0.30 8.14 -51.93 -0.42 -0.72 16 39 H 0.07 -0.03 7.84 -51.93 -0.41 -0.44 16 40 H 0.08 -0.03 8.14 -51.93 -0.42 -0.46 16 41 H 0.18 -0.48 8.02 -52.49 -0.42 -0.90 16 42 H 0.13 -0.10 7.96 -51.93 -0.41 -0.51 16 43 H 0.38 -1.64 8.70 45.56 0.40 -1.24 16 44 H -0.24 0.01 7.11 56.52 0.40 0.41 16 45 H -0.23 -0.20 7.11 56.52 0.40 0.20 16 46 H 0.16 0.29 8.06 -52.49 -0.42 -0.14 16 47 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 48 H 0.09 -0.14 7.90 -51.93 -0.41 -0.55 16 LS Contribution 411.79 15.07 6.21 6.21 Total: 0.00 -8.28 411.79 -10.71 -18.99 By element: Atomic # 1 Polarization: -3.78 SS G_CDS: -7.30 Total: -11.09 kcal Atomic # 6 Polarization: 3.82 SS G_CDS: -0.07 Total: 3.74 kcal Atomic # 7 Polarization: 0.21 SS G_CDS: -0.31 Total: -0.10 kcal Atomic # 8 Polarization: -6.83 SS G_CDS: -1.80 Total: -8.63 kcal Atomic # 14 Polarization: -1.28 SS G_CDS: -5.26 Total: -6.53 kcal Atomic # 16 Polarization: -0.41 SS G_CDS: -2.17 Total: -2.58 kcal Total LS contribution 6.21 Total: 6.21 kcal Total: -8.28 -10.71 -18.99 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_6894092_15734238.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -122.178 kcal (2) G-P(sol) polarization free energy of solvation -8.282 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -130.460 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.706 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.988 kcal (6) G-S(sol) free energy of system = (1) + (5) -141.166 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds