Wall clock time and date at job start Sat Mar 6 2021 08:50:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86307 * 109.47129 * 2 1 4 4 C 1.50701 * 109.47333 * 120.00273 * 2 1 3 5 5 C 1.32731 * 124.70192 * 65.27951 * 4 2 1 6 6 C 1.44463 * 113.09014 * 180.14980 * 5 4 2 7 7 C 1.47037 * 123.47808 * 179.83315 * 6 5 4 8 8 O 1.21553 * 119.99708 * 359.73478 * 7 6 5 9 9 O 1.34798 * 120.00036 * 179.72406 * 7 6 5 10 10 C 1.45200 * 116.99929 * 179.97438 * 9 7 6 11 11 C 1.53001 * 109.47111 * 180.02562 * 10 9 7 12 12 H 1.08992 * 109.47514 * 305.00709 * 11 10 9 13 13 C 1.53002 * 109.46637 * 65.00579 * 11 10 9 14 14 C 1.52997 * 109.46817 * 179.97438 * 13 11 10 15 15 C 1.53005 * 109.47452 * 300.00239 * 14 13 11 16 16 H 1.09002 * 109.46935 * 300.00125 * 15 14 13 17 17 O 1.42900 * 109.47304 * 180.02562 * 15 14 13 18 18 C 1.52999 * 109.47159 * 59.99536 * 15 14 13 19 19 C 1.52997 * 109.47317 * 300.00546 * 18 15 14 20 20 C 1.36110 * 113.04984 * 359.56725 * 6 5 4 21 21 S 1.70447 * 110.80231 * 0.23001 * 20 6 5 22 22 H 0.96703 * 114.00174 * 299.99675 * 1 2 3 23 23 H 1.08997 * 109.47432 * 240.00565 * 2 1 3 24 24 H 1.48497 * 110.00124 * 178.68029 * 3 2 1 25 25 H 1.48502 * 109.99788 * 300.00510 * 3 2 1 26 26 H 1.08002 * 123.45531 * 359.94715 * 5 4 2 27 27 H 1.09008 * 109.46784 * 60.00745 * 10 9 7 28 28 H 1.09000 * 109.47295 * 300.00997 * 10 9 7 29 29 H 1.08993 * 109.47662 * 299.99908 * 13 11 10 30 30 H 1.09002 * 109.47075 * 60.00414 * 13 11 10 31 31 H 1.09002 * 109.47153 * 60.00231 * 14 13 11 32 32 H 1.09001 * 109.47289 * 180.02562 * 14 13 11 33 33 H 0.96700 * 113.99696 * 179.97438 * 17 15 14 34 34 H 1.08996 * 109.46929 * 179.97438 * 18 15 14 35 35 H 1.09002 * 109.46716 * 60.00455 * 18 15 14 36 36 H 1.09002 * 109.47153 * 299.99641 * 19 18 15 37 37 H 1.09001 * 109.46832 * 179.97438 * 19 18 15 38 38 H 1.08000 * 124.59916 * 180.20994 * 20 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.7530 -2.0012 1.4835 6 6 2.3364 -2.4185 2.7374 7 6 2.2706 -3.7975 3.2435 8 8 1.6984 -4.6547 2.5990 9 8 2.8450 -4.1111 4.4219 10 6 2.7403 -5.4916 4.8596 11 6 3.4458 -5.6543 6.2074 12 1 4.4737 -5.3014 6.1244 13 6 2.7099 -4.8358 7.2702 14 6 3.4150 -4.9990 8.6182 15 6 3.4131 -6.4754 9.0195 16 1 2.3850 -6.8281 9.1022 17 8 4.0711 -6.6277 10.2788 18 6 4.1489 -7.2938 7.9567 19 6 3.4437 -7.1307 6.6087 20 6 2.9583 -1.4048 3.3995 21 16 2.8399 0.0526 2.5236 22 1 -0.3934 0.4417 0.7651 23 1 1.7923 -0.5137 -0.8900 24 1 3.5345 1.7704 0.0321 25 1 1.5613 2.4679 -1.2085 26 1 1.2231 -2.6700 0.8215 27 1 3.2098 -6.1431 4.1224 28 1 1.6893 -5.7606 4.9651 29 1 2.7109 -3.7841 6.9842 30 1 1.6820 -5.1888 7.3533 31 1 4.4431 -4.6463 8.5354 32 1 2.8905 -4.4163 9.3755 33 1 4.1068 -7.5404 10.5961 34 1 4.1478 -8.3456 8.2428 35 1 5.1770 -6.9412 7.8739 36 1 2.4157 -7.4834 6.6914 37 1 3.9683 -7.7134 5.8515 38 1 3.4586 -1.5097 4.3508 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_6894092_16737258.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 08:50:23 Heat of formation + Delta-G solvation = -149.968058 kcal Electronic energy + Delta-G solvation = -21648.216391 eV Core-core repulsion = 18162.272250 eV Total energy + Delta-G solvation = -3485.944141 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 299.096 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -41.48109 -40.14766 -39.08145 -37.75020 -37.12467 -36.51666 -32.35258 -31.94748 -31.59281 -27.29408 -27.02812 -25.51451 -23.89156 -22.54759 -22.14841 -21.02770 -20.58748 -18.92018 -18.56743 -18.24561 -17.63125 -17.44414 -17.28057 -16.49530 -16.32193 -15.63333 -15.50412 -15.30173 -15.07316 -14.69031 -14.44173 -14.14901 -13.99040 -13.90025 -13.67775 -13.56474 -13.33707 -13.11931 -12.73333 -12.43801 -12.30176 -12.19386 -12.07309 -11.89734 -11.85675 -11.51271 -11.34887 -11.16853 -10.78402 -10.66940 -10.10836 -9.64978 -5.25592 -0.47790 0.23581 0.59388 0.68828 1.11058 1.50600 1.62768 1.82984 2.05830 3.11356 3.27544 3.49976 3.52687 3.58509 3.64658 3.88403 3.91255 3.96838 4.10743 4.17801 4.20611 4.31574 4.32477 4.34773 4.39453 4.45106 4.48263 4.65754 4.70746 4.85073 4.91385 4.95617 4.98977 5.05876 5.10545 5.12544 5.22189 5.32104 5.44044 6.41678 6.66814 6.77982 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.025 4.025 3 Si 0.656 3.344 4 C -0.247 4.247 5 C -0.051 4.051 6 C -0.153 4.153 7 C 0.529 3.471 8 O -0.503 6.503 9 O -0.352 6.352 10 C 0.073 3.927 11 C -0.089 4.089 12 H 0.086 0.914 13 C -0.111 4.111 14 C -0.113 4.113 15 C 0.102 3.898 16 H 0.055 0.945 17 O -0.569 6.569 18 C -0.150 4.150 19 C -0.111 4.111 20 C -0.173 4.173 21 S 0.208 5.792 22 H 0.381 0.619 23 H 0.125 0.875 24 H -0.237 1.237 25 H -0.232 1.232 26 H 0.158 0.842 27 H 0.073 0.927 28 H 0.074 0.926 29 H 0.077 0.923 30 H 0.066 0.934 31 H 0.071 0.929 32 H 0.072 0.928 33 H 0.379 0.621 34 H 0.069 0.931 35 H 0.073 0.927 36 H 0.069 0.931 37 H 0.071 0.929 38 H 0.182 0.818 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.622 2.201 2.706 3.543 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.339 6.339 2 C -0.139 4.139 3 Si 0.555 3.445 4 C -0.363 4.363 5 C -0.079 4.079 6 C -0.169 4.169 7 C 0.371 3.629 8 O -0.391 6.391 9 O -0.269 6.269 10 C -0.001 4.001 11 C -0.107 4.107 12 H 0.104 0.896 13 C -0.149 4.149 14 C -0.151 4.151 15 C 0.044 3.956 16 H 0.073 0.927 17 O -0.375 6.375 18 C -0.188 4.188 19 C -0.149 4.149 20 C -0.311 4.311 21 S 0.474 5.526 22 H 0.229 0.771 23 H 0.142 0.858 24 H -0.161 1.161 25 H -0.155 1.155 26 H 0.175 0.825 27 H 0.092 0.908 28 H 0.092 0.908 29 H 0.096 0.904 30 H 0.084 0.916 31 H 0.090 0.910 32 H 0.090 0.910 33 H 0.226 0.774 34 H 0.087 0.913 35 H 0.092 0.908 36 H 0.088 0.912 37 H 0.090 0.910 38 H 0.200 0.800 Dipole moment (debyes) X Y Z Total from point charges 1.606 4.337 1.737 4.941 hybrid contribution -0.484 -3.021 -0.268 3.072 sum 1.122 1.316 1.469 2.269 Atomic orbital electron populations 1.86547 1.16517 1.81672 1.49149 1.24454 0.85297 1.09112 0.95000 0.95118 0.82108 0.77220 0.90018 1.24771 1.09899 0.98406 1.03269 1.20987 0.97715 0.94644 0.94578 1.19403 1.08254 0.91502 0.97767 1.20368 0.75493 0.88095 0.78920 1.90884 1.40761 1.49913 1.57590 1.86513 1.71154 1.32327 1.36862 1.23181 1.01870 0.79003 0.96021 1.21271 1.00819 0.96368 0.92259 0.89589 1.21554 0.99114 1.00967 0.93258 1.21482 1.02055 0.94659 0.96855 1.21856 0.94762 0.96217 0.82809 0.92684 1.86527 1.80971 1.32993 1.36973 1.22243 1.00788 1.00562 0.95165 1.21455 1.01639 0.94691 0.97090 1.26070 1.02214 0.97833 1.04941 1.83128 1.49895 1.09081 1.10515 0.77110 0.85787 1.16064 1.15479 0.82460 0.90839 0.90812 0.90417 0.91577 0.91028 0.90970 0.77409 0.91269 0.90816 0.91208 0.90996 0.80047 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.18 12.88 -35.23 -0.45 -0.27 16 2 C -0.03 0.02 2.94 36.01 0.11 0.13 16 3 Si 0.66 -1.26 30.92 -169.99 -5.26 -6.52 16 4 C -0.25 0.11 5.65 -36.19 -0.20 -0.10 16 5 C -0.05 -0.07 9.95 -39.01 -0.39 -0.46 16 6 C -0.15 -0.24 5.98 -104.65 -0.63 -0.86 16 7 C 0.53 1.72 7.92 34.30 0.27 1.99 16 8 O -0.50 -3.06 16.59 -19.31 -0.32 -3.38 16 9 O -0.35 -0.56 9.42 -40.76 -0.38 -0.95 16 10 C 0.07 0.02 4.85 37.16 0.18 0.20 16 11 C -0.09 0.10 2.44 -90.62 -0.22 -0.12 16 12 H 0.09 -0.08 8.14 -51.93 -0.42 -0.50 16 13 C -0.11 0.12 5.10 -26.73 -0.14 -0.02 16 14 C -0.11 0.03 5.57 -26.73 -0.15 -0.12 16 15 C 0.10 -0.05 3.47 -26.73 -0.09 -0.14 16 16 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 17 O -0.57 -0.47 13.32 -35.23 -0.47 -0.94 16 18 C -0.15 0.23 5.55 -26.73 -0.15 0.08 16 19 C -0.11 0.21 5.20 -26.73 -0.14 0.07 16 20 C -0.17 0.14 10.56 29.97 0.32 0.45 16 21 S 0.21 -0.40 20.19 -107.50 -2.17 -2.57 16 22 H 0.38 -1.63 8.70 45.56 0.40 -1.23 16 23 H 0.12 -0.09 7.96 -51.93 -0.41 -0.50 16 24 H -0.24 0.00 7.11 56.52 0.40 0.40 16 25 H -0.23 -0.22 7.11 56.52 0.40 0.18 16 26 H 0.16 0.31 8.06 -52.49 -0.42 -0.11 16 27 H 0.07 0.03 8.14 -51.92 -0.42 -0.39 16 28 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 29 H 0.08 -0.07 7.82 -51.93 -0.41 -0.47 16 30 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 31 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 32 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 33 H 0.38 -1.16 9.08 45.56 0.41 -0.74 16 34 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 35 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 36 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 37 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 38 H 0.18 -0.47 8.02 -52.49 -0.42 -0.89 16 LS Contribution 331.90 15.07 5.00 5.00 Total: 0.00 -7.17 331.90 -9.98 -17.15 By element: Atomic # 1 Polarization: -3.95 SS G_CDS: -4.70 Total: -8.65 kcal Atomic # 6 Polarization: 2.35 SS G_CDS: -1.23 Total: 1.12 kcal Atomic # 8 Polarization: -3.91 SS G_CDS: -1.63 Total: -5.54 kcal Atomic # 14 Polarization: -1.26 SS G_CDS: -5.26 Total: -6.52 kcal Atomic # 16 Polarization: -0.40 SS G_CDS: -2.17 Total: -2.57 kcal Total LS contribution 5.00 Total: 5.00 kcal Total: -7.17 -9.98 -17.15 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_6894092_16737258.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -132.815 kcal (2) G-P(sol) polarization free energy of solvation -7.170 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -139.985 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.983 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.153 kcal (6) G-S(sol) free energy of system = (1) + (5) -149.968 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds