Wall clock time and date at job start Sat Mar 6 2021 07:56:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52992 * 1 3 3 C 1.53005 * 109.46964 * 2 1 4 4 C 1.52998 * 109.47791 * 239.99884 * 2 1 3 5 5 O 1.45201 * 109.47214 * 119.99675 * 2 1 3 6 6 C 1.34638 * 116.99939 * 60.00280 * 5 2 1 7 7 O 1.21512 * 119.99889 * 0.02562 * 6 5 2 8 8 N 1.34776 * 119.99854 * 180.02562 * 6 5 2 9 9 C 1.46505 * 119.99597 * 180.02562 * 8 6 5 10 10 H 1.09000 * 112.85296 * 23.80222 * 9 8 6 11 11 C 1.53781 * 113.61334 * 154.99978 * 9 8 6 12 12 C 1.53786 * 87.17350 * 89.07333 * 11 9 8 13 13 H 1.09000 * 113.60973 * 270.92699 * 12 11 9 14 14 C 1.52990 * 113.61464 * 140.02626 * 12 11 9 15 15 O 1.45200 * 109.47114 * 175.00082 * 14 12 11 16 16 C 1.34714 * 116.99995 * 179.97438 * 15 14 12 17 17 O 1.21468 * 120.00263 * 359.97438 * 16 15 14 18 18 C 1.47730 * 119.99753 * 179.97438 * 16 15 14 19 19 C 1.39609 * 120.14658 * 179.72023 * 18 16 15 20 20 C 1.37966 * 119.84657 * 179.79228 * 19 18 16 21 21 C 1.50697 * 119.92742 * 180.23230 * 20 19 18 22 22 O 1.42900 * 109.47341 * 300.23311 * 21 20 19 23 23 Si 1.86300 * 109.47252 * 180.23447 * 21 20 19 24 24 C 1.38352 * 120.14852 * 0.46713 * 20 19 18 25 25 C 1.38386 * 120.30468 * 359.78778 * 24 20 19 26 26 C 1.37926 * 120.14792 * 359.97438 * 25 24 20 27 27 C 1.53781 * 113.61146 * 252.49455 * 9 8 6 28 28 H 1.08999 * 109.47935 * 300.00228 * 1 2 3 29 29 H 1.08997 * 109.47284 * 60.00451 * 1 2 3 30 30 H 1.09007 * 109.46845 * 179.97438 * 1 2 3 31 31 H 1.09003 * 109.47433 * 179.97438 * 3 2 1 32 32 H 1.09000 * 109.47220 * 300.00061 * 3 2 1 33 33 H 1.09002 * 109.47010 * 59.99957 * 3 2 1 34 34 H 1.08997 * 109.47228 * 300.00319 * 4 2 1 35 35 H 1.09009 * 109.46819 * 59.99847 * 4 2 1 36 36 H 1.08993 * 109.47281 * 179.97438 * 4 2 1 37 37 H 0.96995 * 120.00232 * 359.97438 * 8 6 5 38 38 H 1.09002 * 113.61445 * 203.66333 * 11 9 8 39 39 H 1.09002 * 113.61408 * 334.48063 * 11 9 8 40 40 H 1.09007 * 109.47036 * 294.99322 * 14 12 11 41 41 H 1.08994 * 109.47734 * 54.99728 * 14 12 11 42 42 H 1.07996 * 120.07764 * 0.02562 * 19 18 16 43 43 H 1.08998 * 109.47309 * 60.23626 * 21 20 19 44 44 H 0.96697 * 114.00114 * 300.00672 * 22 21 20 45 45 H 1.48502 * 109.99944 * 179.97438 * 23 21 20 46 46 H 1.48504 * 109.99911 * 301.31801 * 23 21 20 47 47 H 1.08003 * 119.84786 * 179.76502 * 24 20 19 48 48 H 1.07995 * 119.92670 * 179.97438 * 25 24 20 49 49 H 1.07998 * 120.07487 * 179.97438 * 26 25 24 50 50 H 1.09005 * 113.61471 * 25.43638 * 27 9 8 51 51 H 1.08996 * 113.61178 * 156.24980 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0399 1.4426 0.0000 4 6 2.0401 -0.7212 -1.2492 5 8 2.0139 -0.6844 1.1856 6 6 1.6522 -1.9723 1.3384 7 8 0.9516 -2.5097 0.5036 8 7 2.0672 -2.6653 2.4173 9 6 1.6741 -4.0668 2.5832 10 1 1.4225 -4.5505 1.6394 11 6 2.6471 -4.8808 3.4524 12 6 1.8074 -4.4461 4.6653 13 1 2.1364 -3.5068 5.1099 14 6 1.6040 -5.5553 5.6991 15 8 0.9056 -5.0189 6.8535 16 6 0.6458 -5.8729 7.8624 17 8 0.9927 -7.0341 7.7798 18 6 -0.0611 -5.3973 9.0692 19 6 -0.3372 -6.2810 10.1142 20 6 -0.9939 -5.8292 11.2402 21 6 -1.2881 -6.7803 12.3714 22 8 -2.1069 -7.8497 11.8939 23 14 -2.1829 -5.8720 13.7298 24 6 -1.3872 -4.5058 11.3312 25 6 -1.1215 -3.6257 10.2969 26 6 -0.4614 -4.0630 9.1675 27 6 0.6273 -4.2862 3.6882 28 1 -0.3635 0.5138 0.8899 29 1 -0.3634 0.5137 -0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 3.1299 1.4426 0.0005 32 1 1.6765 1.9564 -0.8900 33 1 1.6765 1.9564 0.8900 34 1 1.6768 -1.7489 -1.2492 35 1 1.6767 -0.2074 -2.1392 36 1 3.1300 -0.7208 -1.2493 37 1 2.6268 -2.2364 3.0834 38 1 2.6127 -5.9530 3.2593 39 1 3.6624 -4.4843 3.4595 40 1 1.0137 -6.3588 5.2584 41 1 2.5734 -5.9450 6.0096 42 1 -0.0340 -7.3151 10.0428 43 1 -0.3529 -7.1841 12.7593 44 1 -2.9572 -7.5633 11.5334 45 1 -2.4794 -6.7993 14.8511 46 1 -1.3551 -4.7378 14.2132 47 1 -1.9043 -4.1582 12.2133 48 1 -1.4316 -2.5941 10.3741 49 1 -0.2550 -3.3752 8.3609 50 1 0.0116 -3.4089 3.8868 51 1 0.0397 -5.1950 3.5587 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_7081094_15734084.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 07:56:07 Heat of formation + Delta-G solvation = -144.115359 kcal Electronic energy + Delta-G solvation = -32012.647919 eV Core-core repulsion = 27458.858223 eV Total energy + Delta-G solvation = -4553.789696 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.181 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -41.92971 -41.63009 -40.61680 -40.07000 -37.93630 -37.63383 -37.25634 -35.26579 -34.09454 -33.08755 -32.30514 -29.76765 -28.32925 -28.28798 -26.94335 -26.88836 -25.79122 -24.37153 -23.12152 -22.98379 -21.76344 -21.08980 -20.39602 -19.24532 -19.10978 -18.22100 -17.75126 -17.54216 -17.48824 -17.27395 -17.06686 -16.66213 -16.29382 -16.24763 -15.88272 -15.47038 -15.35488 -15.29815 -15.11487 -14.95825 -14.64024 -14.40119 -14.23675 -13.83009 -13.78856 -13.51117 -13.41313 -13.32857 -13.12752 -13.06068 -12.86983 -12.85184 -12.82740 -12.45636 -12.26864 -12.18123 -12.07188 -11.90645 -11.87852 -11.84107 -11.47923 -11.30651 -11.27198 -10.97400 -10.59155 -10.21373 -10.19595 -10.03032 -5.12715 -0.45060 0.13986 1.14715 1.17550 1.45965 1.53061 1.54773 1.86451 1.90338 2.59437 3.08400 3.23014 3.27349 3.34625 3.44953 3.51582 3.63451 3.74592 3.75958 3.77561 3.83276 3.92765 3.97060 4.07852 4.09601 4.26215 4.27196 4.34041 4.39367 4.47843 4.54544 4.55139 4.56715 4.62429 4.62961 4.75388 4.78101 4.78492 4.85220 4.87061 4.90068 4.93199 4.97603 5.08796 5.12295 5.15968 5.20009 5.33345 5.36630 5.40005 5.48380 5.60395 5.64443 6.39441 6.49528 6.71956 7.41623 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.653 3.347 7 O -0.564 6.564 8 N -0.695 5.695 9 C 0.138 3.862 10 H 0.112 0.888 11 C -0.135 4.135 12 C -0.113 4.113 13 H 0.104 0.896 14 C 0.078 3.922 15 O -0.350 6.350 16 C 0.509 3.491 17 O -0.502 6.502 18 C -0.126 4.126 19 C -0.028 4.028 20 C -0.132 4.132 21 C -0.069 4.069 22 O -0.538 6.538 23 Si 0.692 3.308 24 C -0.081 4.081 25 C -0.126 4.126 26 C -0.057 4.057 27 C -0.146 4.146 28 H 0.060 0.940 29 H 0.072 0.928 30 H 0.087 0.913 31 H 0.067 0.933 32 H 0.082 0.918 33 H 0.067 0.933 34 H 0.087 0.913 35 H 0.072 0.928 36 H 0.060 0.940 37 H 0.407 0.593 38 H 0.104 0.896 39 H 0.083 0.917 40 H 0.076 0.924 41 H 0.075 0.925 42 H 0.142 0.858 43 H 0.117 0.883 44 H 0.380 0.620 45 H -0.252 1.252 46 H -0.257 1.257 47 H 0.134 0.866 48 H 0.138 0.862 49 H 0.141 0.859 50 H 0.078 0.922 51 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.336 4.994 0.663 5.212 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.279 6.279 6 C 0.407 3.593 7 O -0.453 6.453 8 N -0.354 5.354 9 C 0.033 3.967 10 H 0.130 0.870 11 C -0.173 4.173 12 C -0.131 4.131 13 H 0.122 0.878 14 C 0.004 3.996 15 O -0.267 6.267 16 C 0.354 3.646 17 O -0.391 6.391 18 C -0.127 4.127 19 C -0.046 4.046 20 C -0.133 4.133 21 C -0.180 4.180 22 O -0.343 6.343 23 Si 0.593 3.407 24 C -0.099 4.099 25 C -0.144 4.144 26 C -0.075 4.075 27 C -0.185 4.185 28 H 0.079 0.921 29 H 0.091 0.909 30 H 0.106 0.894 31 H 0.086 0.914 32 H 0.101 0.899 33 H 0.086 0.914 34 H 0.106 0.894 35 H 0.091 0.909 36 H 0.079 0.921 37 H 0.242 0.758 38 H 0.123 0.877 39 H 0.102 0.898 40 H 0.095 0.905 41 H 0.093 0.907 42 H 0.159 0.841 43 H 0.134 0.866 44 H 0.227 0.773 45 H -0.177 1.177 46 H -0.182 1.182 47 H 0.151 0.849 48 H 0.156 0.844 49 H 0.159 0.841 50 H 0.097 0.903 51 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -1.044 4.358 1.149 4.626 hybrid contribution 0.928 -0.047 -0.049 0.930 sum -0.116 4.311 1.099 4.451 Atomic orbital electron populations 1.22521 0.93811 1.05070 1.02725 1.22126 0.94469 0.91551 0.81823 1.21881 1.02337 0.92339 1.03349 1.22525 1.01614 1.03460 0.96546 1.86305 1.71495 1.23359 1.46779 1.18060 0.78651 0.80657 0.81977 1.90923 1.40787 1.70355 1.43195 1.44354 1.55492 1.11794 1.23732 1.21749 0.95700 0.79517 0.99720 0.87015 1.23370 0.98865 1.01509 0.93595 1.22758 0.98188 0.99111 0.93058 0.87754 1.23153 0.96817 0.96422 0.83202 1.86521 1.70473 1.42457 1.27280 1.21136 0.76730 0.83818 0.82942 1.90870 1.49430 1.18562 1.80198 1.19162 1.04698 0.95350 0.93523 1.21133 0.93044 0.99952 0.90521 1.20325 1.01011 0.94929 0.96988 1.25107 0.99476 0.92622 1.00791 1.86533 1.32619 1.32120 1.83044 0.94757 0.88212 0.79532 0.78176 1.21356 0.97149 0.92794 0.98596 1.21167 0.99486 1.00475 0.93247 1.21559 0.93760 0.94265 0.97898 1.23624 0.96576 1.03518 0.94779 0.92110 0.90916 0.89411 0.91392 0.89908 0.91393 0.89416 0.90910 0.92110 0.75818 0.87733 0.89827 0.90543 0.90688 0.84053 0.86595 0.77268 1.17723 1.18151 0.84890 0.84396 0.84093 0.90330 0.88475 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.21 8.37 37.15 0.31 0.10 16 2 C 0.14 0.15 1.13 -90.62 -0.10 0.05 16 3 C -0.14 0.13 8.85 37.16 0.33 0.46 16 4 C -0.18 -0.22 8.37 37.16 0.31 0.10 16 5 O -0.36 -0.78 9.94 -40.32 -0.40 -1.18 16 6 C 0.65 1.63 8.06 54.05 0.44 2.06 16 7 O -0.56 -2.74 11.48 -19.28 -0.22 -2.96 16 8 N -0.70 0.33 5.27 -57.93 -0.31 0.03 16 9 C 0.14 -0.18 4.32 -67.11 -0.29 -0.47 16 10 H 0.11 0.01 7.46 -51.93 -0.39 -0.38 16 11 C -0.14 0.42 7.38 -25.92 -0.19 0.23 16 12 C -0.11 0.27 3.91 -89.67 -0.35 -0.08 16 13 H 0.10 -0.29 8.14 -51.93 -0.42 -0.71 16 14 C 0.08 -0.04 5.32 37.15 0.20 0.15 16 15 O -0.35 -0.40 9.47 -40.53 -0.38 -0.78 16 16 C 0.51 1.44 7.90 34.61 0.27 1.71 16 17 O -0.50 -2.80 16.14 -19.24 -0.31 -3.11 16 18 C -0.13 -0.17 5.87 -104.98 -0.62 -0.79 16 19 C -0.03 -0.04 9.15 -39.17 -0.36 -0.40 16 20 C -0.13 0.05 5.39 -104.68 -0.56 -0.52 16 21 C -0.07 0.04 2.82 36.00 0.10 0.15 16 22 O -0.54 -0.04 12.76 -35.23 -0.45 -0.49 16 23 Si 0.69 -1.30 29.78 -169.99 -5.06 -6.36 16 24 C -0.08 0.14 8.67 -39.48 -0.34 -0.20 16 25 C -0.13 0.25 10.03 -39.64 -0.40 -0.15 16 26 C -0.06 0.04 9.62 -39.17 -0.38 -0.34 16 27 C -0.15 0.24 7.44 -25.78 -0.19 0.05 16 28 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 29 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 30 H 0.09 0.29 5.88 -51.93 -0.31 -0.02 16 31 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 32 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 33 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 34 H 0.09 0.29 5.88 -51.93 -0.31 -0.02 16 35 H 0.07 -0.01 8.14 -51.92 -0.42 -0.43 16 36 H 0.06 0.06 8.14 -51.93 -0.42 -0.37 16 37 H 0.41 -0.98 8.81 -40.82 -0.36 -1.34 16 38 H 0.10 -0.39 8.10 -51.93 -0.42 -0.81 16 39 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 40 H 0.08 -0.04 7.85 -51.93 -0.41 -0.44 16 41 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 42 H 0.14 0.34 7.65 -52.49 -0.40 -0.06 16 43 H 0.12 -0.01 7.96 -51.93 -0.41 -0.43 16 44 H 0.38 -1.49 8.70 45.56 0.40 -1.09 16 45 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 46 H -0.26 -0.05 7.11 56.52 0.40 0.36 16 47 H 0.13 -0.51 4.86 -52.48 -0.26 -0.76 16 48 H 0.14 -0.59 8.06 -52.49 -0.42 -1.01 16 49 H 0.14 -0.29 7.61 -52.49 -0.40 -0.69 16 50 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 51 H 0.10 -0.19 7.91 -51.93 -0.41 -0.60 16 LS Contribution 417.94 15.07 6.30 6.30 Total: 0.00 -8.70 417.94 -10.60 -19.30 By element: Atomic # 1 Polarization: -4.92 SS G_CDS: -7.94 Total: -12.86 kcal Atomic # 6 Polarization: 3.95 SS G_CDS: -1.82 Total: 2.13 kcal Atomic # 7 Polarization: 0.33 SS G_CDS: -0.31 Total: 0.03 kcal Atomic # 8 Polarization: -6.77 SS G_CDS: -1.77 Total: -8.53 kcal Atomic # 14 Polarization: -1.30 SS G_CDS: -5.06 Total: -6.36 kcal Total LS contribution 6.30 Total: 6.30 kcal Total: -8.70 -10.60 -19.30 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_7081094_15734084.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -124.813 kcal (2) G-P(sol) polarization free energy of solvation -8.705 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -133.517 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.598 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.303 kcal (6) G-S(sol) free energy of system = (1) + (5) -144.115 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds