Wall clock time and date at job start Sat Mar 6 2021 07:56:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52998 * 109.46989 * 2 1 4 4 C 1.53002 * 109.46943 * 240.00160 * 2 1 3 5 5 O 1.45196 * 109.47120 * 119.99853 * 2 1 3 6 6 C 1.34644 * 116.99750 * 60.00078 * 5 2 1 7 7 O 1.21507 * 119.99930 * 359.97438 * 6 5 2 8 8 N 1.34777 * 119.99827 * 179.97438 * 6 5 2 9 9 C 1.46496 * 120.00258 * 179.97438 * 8 6 5 10 10 H 1.09002 * 112.84597 * 336.20253 * 9 8 6 11 11 C 1.53783 * 113.61176 * 107.50310 * 9 8 6 12 12 C 1.53792 * 87.07761 * 139.98581 * 11 9 8 13 13 H 1.09000 * 113.61239 * 89.11728 * 12 11 9 14 14 C 1.52990 * 113.61093 * 220.01920 * 12 11 9 15 15 O 1.45202 * 109.47292 * 272.49798 * 14 12 11 16 16 C 1.34712 * 117.00155 * 180.02562 * 15 14 12 17 17 O 1.21466 * 120.00210 * 359.97438 * 16 15 14 18 18 C 1.47729 * 119.99870 * 179.97438 * 16 15 14 19 19 C 1.39610 * 120.14834 * 179.97438 * 18 16 15 20 20 C 1.37965 * 119.84706 * 179.97438 * 19 18 16 21 21 C 1.50700 * 119.92727 * 179.97438 * 20 19 18 22 22 O 1.42902 * 109.46948 * 300.00471 * 21 20 19 23 23 Si 1.86291 * 109.47548 * 179.97438 * 21 20 19 24 24 C 1.38342 * 120.14953 * 0.02562 * 20 19 18 25 25 C 1.38394 * 120.30470 * 0.02562 * 24 20 19 26 26 C 1.37922 * 120.14942 * 359.69771 * 25 24 20 27 27 C 1.53772 * 113.61760 * 205.00304 * 9 8 6 28 28 H 1.09004 * 109.47306 * 299.99804 * 1 2 3 29 29 H 1.09003 * 109.47378 * 60.00136 * 1 2 3 30 30 H 1.09006 * 109.47255 * 179.97438 * 1 2 3 31 31 H 1.08999 * 109.47084 * 180.02562 * 3 2 1 32 32 H 1.09003 * 109.46954 * 299.99569 * 3 2 1 33 33 H 1.08998 * 109.47592 * 60.00181 * 3 2 1 34 34 H 1.09005 * 109.46853 * 299.99576 * 4 2 1 35 35 H 1.08994 * 109.47198 * 59.99893 * 4 2 1 36 36 H 1.08999 * 109.46961 * 179.97438 * 4 2 1 37 37 H 0.96999 * 120.00047 * 0.02562 * 8 6 5 38 38 H 1.09004 * 113.61290 * 254.52714 * 11 9 8 39 39 H 1.08998 * 113.61645 * 25.44020 * 11 9 8 40 40 H 1.08998 * 109.47440 * 32.49711 * 14 12 11 41 41 H 1.09005 * 109.47346 * 152.49634 * 14 12 11 42 42 H 1.08004 * 120.07586 * 359.97438 * 19 18 16 43 43 H 1.09008 * 109.46836 * 59.99588 * 21 20 19 44 44 H 0.96701 * 113.99868 * 299.98899 * 22 21 20 45 45 H 1.48498 * 109.99984 * 58.68042 * 23 21 20 46 46 H 1.48496 * 110.00368 * 180.02562 * 23 21 20 47 47 H 1.08002 * 119.84612 * 179.97438 * 24 20 19 48 48 H 1.07999 * 119.92481 * 179.97438 * 25 24 20 49 49 H 1.07993 * 120.07627 * 180.30162 * 26 25 24 50 50 H 1.09001 * 113.61542 * 334.56637 * 27 9 8 51 51 H 1.09001 * 113.61429 * 105.38719 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0399 -0.7212 -1.2493 5 8 2.0140 -0.6844 1.1855 6 6 1.6522 -1.9723 1.3383 7 8 0.9508 -2.5094 0.5040 8 7 2.0680 -2.6657 2.4166 9 6 1.6739 -4.0668 2.5832 10 1 0.7591 -4.3160 2.0454 11 6 2.8217 -5.0621 2.3443 12 6 2.2735 -5.8599 3.5393 13 1 1.5232 -6.6006 3.2625 14 6 3.3645 -6.4285 4.4488 15 8 3.7808 -7.7276 3.9515 16 6 4.7419 -8.3685 4.6445 17 8 5.2195 -7.8559 5.6368 18 6 5.2151 -9.6947 4.1977 19 6 6.2114 -10.3613 4.9132 20 6 6.6483 -11.5999 4.4906 21 6 7.7241 -12.3209 5.2613 22 8 8.9101 -11.5240 5.2826 23 14 8.0868 -13.9540 4.4416 24 6 6.1018 -12.1810 3.3604 25 6 5.1146 -11.5252 2.6458 26 6 4.6645 -10.2892 3.0603 27 6 1.6755 -4.5373 4.0472 28 1 -0.3634 0.5138 0.8900 29 1 -0.3634 0.5138 -0.8900 30 1 -0.3634 -1.0277 -0.0005 31 1 3.1299 1.4425 -0.0005 32 1 1.6766 1.9563 -0.8901 33 1 1.6767 1.9564 0.8900 34 1 1.6766 -1.7489 -1.2492 35 1 1.6766 -0.2074 -2.1392 36 1 3.1299 -0.7208 -1.2495 37 1 2.6275 -2.2368 3.0828 38 1 2.7490 -5.5926 1.3949 39 1 3.8106 -4.6383 2.5191 40 1 4.2191 -5.7520 4.4578 41 1 2.9747 -6.5348 5.4612 42 1 6.6392 -9.9085 5.7955 43 1 7.3849 -12.4947 6.2826 44 1 9.2690 -11.3295 4.4059 45 1 8.5195 -13.7329 3.0384 46 1 9.1458 -14.6751 5.1925 47 1 6.4477 -13.1506 3.0338 48 1 4.6925 -11.9844 1.7641 49 1 3.8907 -9.7807 2.5046 50 1 2.3510 -3.9701 4.6874 51 1 0.6776 -4.6428 4.4729 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_7081094_15734238.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 07:56:10 Heat of formation + Delta-G solvation = -143.703729 kcal Electronic energy + Delta-G solvation = -31841.957212 eV Core-core repulsion = 27288.185366 eV Total energy + Delta-G solvation = -4553.771847 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.181 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -41.97511 -41.75203 -40.55404 -40.05523 -38.09511 -37.74852 -37.42071 -35.42468 -34.26591 -33.08806 -32.25732 -29.73145 -28.38822 -28.32471 -26.88898 -26.77581 -25.81899 -24.53696 -22.94030 -22.49614 -21.83222 -21.41727 -20.54666 -19.26254 -19.05388 -18.43804 -17.92016 -17.64942 -17.58589 -17.23441 -17.19428 -16.64880 -16.31727 -16.27909 -16.11284 -15.58756 -15.43459 -15.39715 -14.91926 -14.84483 -14.60868 -14.38859 -14.13948 -13.79323 -13.51978 -13.46782 -13.38395 -13.24743 -13.11376 -13.04978 -12.93175 -12.89025 -12.83617 -12.55718 -12.47487 -12.28272 -12.12404 -12.02188 -11.86993 -11.71189 -11.60680 -11.41663 -11.30700 -11.12601 -10.70599 -10.18662 -10.17296 -9.98915 -4.92368 -0.45484 0.19800 1.13436 1.25923 1.37187 1.49955 1.60333 1.70965 1.98077 2.61820 3.11166 3.31251 3.35221 3.38853 3.51607 3.59134 3.71146 3.72172 3.78047 3.81032 3.86348 3.92288 4.00337 4.14207 4.17328 4.22150 4.32341 4.41168 4.48200 4.49729 4.59151 4.60383 4.67289 4.70346 4.74289 4.75002 4.77290 4.84053 4.85402 4.89745 4.92890 4.99635 5.04643 5.12929 5.18545 5.20871 5.24939 5.29099 5.29957 5.33306 5.47713 5.57202 5.74426 6.37063 6.44698 6.56346 7.31207 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.371 6.371 6 C 0.643 3.357 7 O -0.593 6.593 8 N -0.691 5.691 9 C 0.136 3.864 10 H 0.111 0.889 11 C -0.147 4.147 12 C -0.098 4.098 13 H 0.118 0.882 14 C 0.076 3.924 15 O -0.347 6.347 16 C 0.509 3.491 17 O -0.540 6.540 18 C -0.146 4.146 19 C -0.045 4.045 20 C -0.132 4.132 21 C -0.092 4.092 22 O -0.551 6.551 23 Si 0.782 3.218 24 C -0.075 4.075 25 C -0.119 4.119 26 C -0.054 4.054 27 C -0.123 4.123 28 H 0.062 0.938 29 H 0.087 0.913 30 H 0.064 0.936 31 H 0.068 0.932 32 H 0.098 0.902 33 H 0.069 0.931 34 H 0.064 0.936 35 H 0.087 0.913 36 H 0.060 0.940 37 H 0.417 0.583 38 H 0.073 0.927 39 H 0.089 0.911 40 H 0.072 0.928 41 H 0.077 0.923 42 H 0.120 0.880 43 H 0.122 0.878 44 H 0.387 0.613 45 H -0.273 1.273 46 H -0.306 1.306 47 H 0.159 0.841 48 H 0.170 0.830 49 H 0.155 0.845 50 H 0.105 0.895 51 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.739 -2.104 -2.621 4.336 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.286 6.286 6 C 0.397 3.603 7 O -0.484 6.484 8 N -0.350 5.350 9 C 0.033 3.967 10 H 0.129 0.871 11 C -0.185 4.185 12 C -0.116 4.116 13 H 0.136 0.864 14 C 0.003 3.997 15 O -0.263 6.263 16 C 0.356 3.644 17 O -0.432 6.432 18 C -0.147 4.147 19 C -0.064 4.064 20 C -0.133 4.133 21 C -0.200 4.200 22 O -0.360 6.360 23 Si 0.686 3.314 24 C -0.093 4.093 25 C -0.137 4.137 26 C -0.072 4.072 27 C -0.161 4.161 28 H 0.081 0.919 29 H 0.105 0.895 30 H 0.083 0.917 31 H 0.087 0.913 32 H 0.117 0.883 33 H 0.088 0.912 34 H 0.083 0.917 35 H 0.106 0.894 36 H 0.079 0.921 37 H 0.254 0.746 38 H 0.092 0.908 39 H 0.107 0.893 40 H 0.090 0.910 41 H 0.095 0.905 42 H 0.138 0.862 43 H 0.140 0.860 44 H 0.236 0.764 45 H -0.199 1.199 46 H -0.234 1.234 47 H 0.176 0.824 48 H 0.188 0.812 49 H 0.173 0.827 50 H 0.123 0.877 51 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -2.501 -2.586 -2.551 4.410 hybrid contribution 1.135 1.468 0.321 1.883 sum -1.366 -1.118 -2.230 2.844 Atomic orbital electron populations 1.22473 0.93950 1.03741 1.03525 1.22351 0.94528 0.92551 0.81518 1.21894 1.02407 0.90950 1.04261 1.22471 1.01562 1.02287 0.97379 1.86316 1.71561 1.23400 1.47274 1.18428 0.78568 0.80687 0.82642 1.90898 1.42293 1.71036 1.44197 1.44789 1.54789 1.12354 1.23071 1.22557 0.98910 0.77043 0.98233 0.87144 1.23623 0.98957 0.96788 0.99166 1.22329 0.97141 0.96504 0.95667 0.86438 1.23261 0.97741 0.80275 0.98472 1.86521 1.51612 1.34150 1.54014 1.21495 0.76615 0.85896 0.80398 1.90840 1.57056 1.68129 1.27166 1.19214 1.02201 0.92727 1.00572 1.21066 0.93171 0.93982 0.98165 1.20297 0.99837 0.95387 0.97731 1.25440 0.84011 1.03733 1.06790 1.86595 1.41959 1.72282 1.35139 0.94021 0.86328 0.75286 0.75730 1.21647 0.95006 0.99926 0.92687 1.21553 0.96690 0.94294 1.01144 1.21779 0.97356 0.95148 0.92951 1.23364 1.03497 0.94158 0.95038 0.91932 0.89463 0.91708 0.91275 0.88296 0.91174 0.91726 0.89447 0.92065 0.74629 0.90823 0.89285 0.90996 0.90485 0.86230 0.86036 0.76390 1.19935 1.23433 0.82406 0.81243 0.82699 0.87690 0.88440 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.57 8.37 71.98 0.60 0.03 16 2 C 0.13 0.39 1.13 -10.79 -0.01 0.38 16 3 C -0.14 0.25 8.85 71.98 0.64 0.89 16 4 C -0.18 -0.61 8.37 71.98 0.60 -0.01 16 5 O -0.37 -2.08 9.94 -55.54 -0.55 -2.64 16 6 C 0.64 4.20 8.06 129.79 1.05 5.25 16 7 O -0.59 -6.92 11.48 19.82 0.23 -6.69 16 8 N -0.69 0.02 5.36 -567.62 -3.04 -3.02 16 9 C 0.14 -0.29 4.24 45.52 0.19 -0.10 16 10 H 0.11 0.09 7.46 -2.39 -0.02 0.07 16 11 C -0.15 0.40 7.43 31.12 0.23 0.63 16 12 C -0.10 0.46 4.02 -10.27 -0.04 0.42 16 13 H 0.12 -0.67 8.14 -2.39 -0.02 -0.69 16 14 C 0.08 -0.05 5.31 71.98 0.38 0.33 16 15 O -0.35 -1.01 9.47 -56.22 -0.53 -1.55 16 16 C 0.51 3.63 7.90 70.33 0.56 4.19 16 17 O -0.54 -7.24 16.14 19.94 0.32 -6.91 16 18 C -0.15 -0.53 5.87 -20.10 -0.12 -0.65 16 19 C -0.05 -0.19 9.15 22.54 0.21 0.01 16 20 C -0.13 0.08 5.38 -19.90 -0.11 -0.03 16 21 C -0.09 0.08 2.82 71.24 0.20 0.28 16 22 O -0.55 -1.84 12.77 -148.98 -1.90 -3.74 16 23 Si 0.78 -3.29 29.78 68.60 2.04 -1.24 16 24 C -0.08 0.39 8.67 22.33 0.19 0.58 16 25 C -0.12 0.72 10.03 22.23 0.22 0.94 16 26 C -0.05 0.12 9.62 22.54 0.22 0.34 16 27 C -0.12 0.82 7.39 31.12 0.23 1.05 16 28 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 29 H 0.09 -0.03 8.14 -2.39 -0.02 -0.05 16 30 H 0.06 0.54 5.88 -2.38 -0.01 0.52 16 31 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 32 H 0.10 -0.51 8.14 -2.39 -0.02 -0.53 16 33 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 34 H 0.06 0.55 5.88 -2.38 -0.01 0.54 16 35 H 0.09 -0.01 8.14 -2.39 -0.02 -0.03 16 36 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 37 H 0.42 -1.82 8.84 -92.71 -0.82 -2.64 16 38 H 0.07 -0.07 8.14 -2.39 -0.02 -0.09 16 39 H 0.09 -0.23 7.90 -2.39 -0.02 -0.25 16 40 H 0.07 0.00 7.84 -2.39 -0.02 -0.02 16 41 H 0.08 -0.04 8.14 -2.38 -0.02 -0.06 16 42 H 0.12 0.94 7.65 -2.91 -0.02 0.92 16 43 H 0.12 -0.19 7.96 -2.38 -0.02 -0.21 16 44 H 0.39 -1.08 8.70 -74.06 -0.64 -1.73 16 45 H -0.27 0.46 7.11 99.48 0.71 1.17 16 46 H -0.31 -1.36 7.11 99.48 0.71 -0.65 16 47 H 0.16 -1.62 4.86 -2.91 -0.01 -1.64 16 48 H 0.17 -2.06 8.06 -2.91 -0.02 -2.08 16 49 H 0.16 -0.82 7.61 -2.91 -0.02 -0.85 16 50 H 0.10 -0.91 8.08 -2.39 -0.02 -0.93 16 51 H 0.10 -0.78 8.14 -2.39 -0.02 -0.80 16 Total: 0.00 -22.61 418.04 1.34 -21.27 By element: Atomic # 1 Polarization: -9.56 SS G_CDS: -0.47 Total: -10.03 kcal Atomic # 6 Polarization: 9.31 SS G_CDS: 5.24 Total: 14.55 kcal Atomic # 7 Polarization: 0.02 SS G_CDS: -3.04 Total: -3.02 kcal Atomic # 8 Polarization: -19.09 SS G_CDS: -2.44 Total: -21.53 kcal Atomic # 14 Polarization: -3.29 SS G_CDS: 2.04 Total: -1.24 kcal Total: -22.61 1.34 -21.27 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_7081094_15734238.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -122.431 kcal (2) G-P(sol) polarization free energy of solvation -22.612 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -145.043 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.339 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.273 kcal (6) G-S(sol) free energy of system = (1) + (5) -143.704 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds