Wall clock time and date at job start Sat Mar 6 2021 11:06:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52992 * 1 3 3 C 1.53002 * 109.47216 * 2 1 4 4 C 1.52998 * 109.47169 * 240.00235 * 2 1 3 5 5 O 1.42893 * 109.47286 * 120.00385 * 2 1 3 6 6 C 1.42899 * 114.00339 * 59.99878 * 5 2 1 7 7 H 1.08994 * 112.84733 * 18.80139 * 6 5 2 8 8 C 1.53781 * 113.61968 * 150.00395 * 6 5 2 9 9 C 1.53775 * 87.08243 * 140.06268 * 8 6 5 10 10 H 1.08999 * 113.61212 * 89.20267 * 9 8 6 11 11 C 1.53000 * 113.61254 * 220.01398 * 9 8 6 12 12 O 1.45206 * 109.46794 * 185.00276 * 11 9 8 13 13 C 1.34233 * 116.99615 * 180.02562 * 12 11 9 14 14 O 1.20825 * 120.00155 * 359.97438 * 13 12 11 15 15 C 1.50701 * 119.99872 * 179.97438 * 13 12 11 16 16 C 1.52992 * 109.47221 * 179.97438 * 15 13 12 17 17 O 1.42900 * 109.47451 * 180.02562 * 16 15 13 18 18 C 1.35892 * 117.00484 * 180.02562 * 17 16 15 19 19 C 1.38732 * 120.05920 * 180.02562 * 18 17 16 20 20 C 1.38149 * 119.94758 * 179.97438 * 19 18 17 21 21 C 1.38269 * 120.05054 * 0.02562 * 20 19 18 22 22 C 1.50700 * 119.93900 * 179.97438 * 21 20 19 23 23 O 1.42896 * 109.47341 * 300.00123 * 22 21 20 24 24 Si 1.86300 * 109.46849 * 180.02562 * 22 21 20 25 25 C 1.38264 * 120.11486 * 0.27666 * 21 20 19 26 26 C 1.38143 * 120.05501 * 359.44957 * 25 21 20 27 27 C 1.53774 * 87.08458 * 334.56754 * 9 8 6 28 28 H 1.09006 * 109.47344 * 300.00145 * 1 2 3 29 29 H 1.09007 * 109.47110 * 59.99527 * 1 2 3 30 30 H 1.09001 * 109.47495 * 179.97438 * 1 2 3 31 31 H 1.09001 * 109.47130 * 180.02562 * 3 2 1 32 32 H 1.09000 * 109.47165 * 300.00059 * 3 2 1 33 33 H 1.08995 * 109.47198 * 60.00449 * 3 2 1 34 34 H 1.09009 * 109.47179 * 300.00162 * 4 2 1 35 35 H 1.09000 * 109.47222 * 59.99935 * 4 2 1 36 36 H 1.09006 * 109.47652 * 179.97438 * 4 2 1 37 37 H 1.09002 * 113.61262 * 25.51132 * 8 6 5 38 38 H 1.09002 * 113.61360 * 254.61613 * 8 6 5 39 39 H 1.09003 * 109.47214 * 65.00701 * 11 9 8 40 40 H 1.08996 * 109.47854 * 305.00141 * 11 9 8 41 41 H 1.09008 * 109.46689 * 59.99922 * 15 13 12 42 42 H 1.08998 * 109.47301 * 300.00032 * 15 13 12 43 43 H 1.09008 * 109.47192 * 60.00427 * 16 15 13 44 44 H 1.08998 * 109.47170 * 300.00309 * 16 15 13 45 45 H 1.08000 * 120.02660 * 359.96129 * 19 18 17 46 46 H 1.07992 * 119.97601 * 179.97438 * 20 19 18 47 47 H 1.09000 * 109.46989 * 60.00454 * 22 21 20 48 48 H 0.96693 * 114.00306 * 299.99773 * 23 22 21 49 49 H 1.48506 * 110.00048 * 58.68772 * 24 22 21 50 50 H 1.48502 * 109.99996 * 180.02562 * 24 22 21 51 51 H 1.08003 * 119.97236 * 179.73093 * 25 21 20 52 52 H 1.08000 * 120.02735 * 180.28019 * 26 25 21 53 53 H 1.09004 * 113.61676 * 139.97983 * 27 9 8 54 54 H 1.08997 * 113.61599 * 270.88662 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0399 -0.7212 -1.2493 5 8 2.0063 -0.6737 1.1667 6 6 1.5847 -2.0356 1.2644 7 1 1.2522 -2.4451 0.3106 8 6 2.5836 -2.9380 2.0077 9 6 1.3666 -3.6135 2.6613 10 1 0.9755 -4.4554 2.0901 11 6 1.5701 -3.9431 4.1415 12 8 0.4206 -4.6799 4.6357 13 6 0.4414 -5.0474 5.9266 14 8 1.3889 -4.7633 6.6204 15 6 -0.7170 -5.8143 6.5104 16 6 -0.4428 -6.1066 7.9869 17 8 -1.5410 -6.8344 8.5405 18 6 -1.4562 -7.1754 9.8532 19 6 -2.4865 -7.8831 10.4552 20 6 -2.3976 -8.2291 11.7897 21 6 -1.2832 -7.8702 12.5254 22 6 -1.1892 -8.2485 13.9811 23 8 -2.2791 -7.6637 14.6966 24 14 0.4197 -7.6237 14.6823 25 6 -0.2579 -7.1596 11.9293 26 6 -0.3394 -6.8161 10.5937 27 6 0.6068 -2.2981 2.4219 28 1 -0.3634 0.5139 0.8900 29 1 -0.3634 0.5139 -0.8900 30 1 -0.3634 -1.0276 -0.0005 31 1 3.1300 1.4425 -0.0005 32 1 1.6766 1.9564 -0.8900 33 1 1.6767 1.9563 0.8900 34 1 1.6766 -1.7489 -1.2493 35 1 1.6766 -0.2073 -2.1392 36 1 3.1300 -0.7208 -1.2496 37 1 3.2161 -2.4001 2.7140 38 1 3.1487 -3.5984 1.3499 39 1 1.6798 -3.0183 4.7079 40 1 2.4681 -4.5497 4.2586 41 1 -0.8396 -6.7536 5.9711 42 1 -1.6275 -5.2219 6.4200 43 1 -0.3200 -5.1675 8.5266 44 1 0.4676 -6.6991 8.0770 45 1 -3.3574 -8.1630 9.8811 46 1 -3.1995 -8.7796 12.2589 47 1 -1.2312 -9.3334 14.0780 48 1 -2.3048 -6.6980 14.6539 49 1 0.5027 -6.1490 14.5275 50 1 0.5250 -7.9908 16.1174 51 1 0.6096 -6.8767 12.5072 52 1 0.4638 -6.2649 10.1275 53 1 -0.4242 -2.4420 2.0984 54 1 0.6988 -1.5853 3.2413 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_764628_14598394.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:06:45 Heat of formation + Delta-G solvation = -149.396083 kcal Electronic energy + Delta-G solvation = -31615.205796 eV Core-core repulsion = 27099.301543 eV Total energy + Delta-G solvation = -4515.904253 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 365.201 amu Computer time = 1.50 seconds Orbital eigenvalues (eV) -41.81787 -41.25004 -40.79265 -39.29913 -38.60216 -37.46819 -37.25695 -33.94150 -33.59413 -32.09116 -31.52924 -29.79627 -28.35375 -28.32083 -26.76453 -26.62385 -25.76888 -23.96150 -23.38039 -22.31170 -21.73284 -20.86678 -20.58555 -19.61580 -18.72611 -18.26522 -18.03160 -17.82904 -17.24190 -17.02799 -16.99943 -16.51801 -16.38164 -16.14892 -15.94040 -15.78846 -15.50729 -14.99811 -14.75074 -14.60657 -14.48092 -14.38151 -14.31285 -14.15183 -13.85388 -13.49844 -13.47924 -13.32845 -13.19779 -13.01072 -12.93866 -12.88181 -12.78421 -12.65883 -12.42671 -12.30094 -12.20737 -12.08149 -11.93102 -11.86973 -11.79004 -11.62173 -11.54926 -11.34296 -11.17908 -10.61213 -10.36523 -10.04420 -9.23672 -4.93829 0.26820 0.30000 1.02959 1.24589 1.31276 1.58107 1.93830 2.29455 2.64381 2.73203 3.36129 3.42637 3.45559 3.53792 3.67281 3.73961 3.76033 3.81251 3.81913 3.86398 3.91637 3.96019 3.98651 4.08328 4.11855 4.19590 4.21324 4.29928 4.38304 4.43094 4.49765 4.56482 4.58306 4.62448 4.63592 4.67543 4.75043 4.76581 4.76889 4.78340 4.84234 4.91224 4.93961 4.97119 5.00468 5.11631 5.15721 5.16758 5.25639 5.28224 5.33107 5.33882 5.40567 5.48621 5.70371 6.28842 6.41874 6.48551 6.56672 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C 0.098 3.902 3 C -0.140 4.140 4 C -0.177 4.177 5 O -0.382 6.382 6 C 0.059 3.941 7 H 0.104 0.896 8 C -0.126 4.126 9 C -0.102 4.102 10 H 0.118 0.882 11 C 0.078 3.922 12 O -0.352 6.352 13 C 0.472 3.528 14 O -0.539 6.539 15 C -0.107 4.107 16 C 0.069 3.931 17 O -0.319 6.319 18 C 0.123 3.877 19 C -0.157 4.157 20 C -0.059 4.059 21 C -0.158 4.158 22 C -0.075 4.075 23 O -0.549 6.549 24 Si 0.759 3.241 25 C -0.080 4.080 26 C -0.209 4.209 27 C -0.149 4.149 28 H 0.056 0.944 29 H 0.075 0.925 30 H 0.062 0.938 31 H 0.057 0.943 32 H 0.084 0.916 33 H 0.056 0.944 34 H 0.065 0.935 35 H 0.077 0.923 36 H 0.059 0.941 37 H 0.085 0.915 38 H 0.090 0.910 39 H 0.067 0.933 40 H 0.075 0.925 41 H 0.139 0.861 42 H 0.136 0.864 43 H 0.071 0.929 44 H 0.075 0.925 45 H 0.142 0.858 46 H 0.140 0.860 47 H 0.126 0.874 48 H 0.385 0.615 49 H -0.286 1.286 50 H -0.302 1.302 51 H 0.144 0.856 52 H 0.142 0.858 53 H 0.079 0.921 54 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.028 -0.828 -6.008 6.065 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.231 4.231 2 C 0.059 3.941 3 C -0.198 4.198 4 C -0.234 4.234 5 O -0.302 6.302 6 C 0.001 3.999 7 H 0.122 0.878 8 C -0.164 4.164 9 C -0.120 4.120 10 H 0.136 0.864 11 C 0.004 3.996 12 O -0.269 6.269 13 C 0.316 3.684 14 O -0.429 6.429 15 C -0.144 4.144 16 C -0.006 4.006 17 O -0.233 6.233 18 C 0.078 3.922 19 C -0.176 4.176 20 C -0.077 4.077 21 C -0.159 4.159 22 C -0.184 4.184 23 O -0.357 6.357 24 Si 0.665 3.335 25 C -0.097 4.097 26 C -0.227 4.227 27 C -0.186 4.186 28 H 0.075 0.925 29 H 0.094 0.906 30 H 0.081 0.919 31 H 0.077 0.923 32 H 0.103 0.897 33 H 0.075 0.925 34 H 0.084 0.916 35 H 0.095 0.905 36 H 0.078 0.922 37 H 0.103 0.897 38 H 0.109 0.891 39 H 0.085 0.915 40 H 0.094 0.906 41 H 0.157 0.843 42 H 0.153 0.847 43 H 0.089 0.911 44 H 0.093 0.907 45 H 0.160 0.840 46 H 0.158 0.842 47 H 0.144 0.856 48 H 0.234 0.766 49 H -0.213 1.213 50 H -0.231 1.231 51 H 0.161 0.839 52 H 0.160 0.840 53 H 0.097 0.903 54 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 0.495 -0.763 -5.153 5.233 hybrid contribution -0.655 1.001 0.235 1.219 sum -0.160 0.238 -4.919 4.927 Atomic orbital electron populations 1.22442 0.94915 1.02795 1.02937 1.21672 0.93721 0.93313 0.85355 1.21801 1.01657 0.93385 1.02909 1.22452 1.01922 1.01207 0.97835 1.88016 1.74250 1.24190 1.43763 1.23685 0.95743 0.82330 0.98103 0.87801 1.23227 0.96343 0.97338 0.99447 1.22328 0.98554 0.98196 0.92915 0.86401 1.23184 0.86326 0.95459 0.94583 1.86480 1.45938 1.67358 1.27074 1.23648 0.87765 0.76630 0.80321 1.90710 1.36963 1.53907 1.61363 1.21101 0.96069 1.03328 0.93940 1.22483 0.88527 0.96627 0.92989 1.85941 1.44103 1.70927 1.22317 1.19161 0.94876 0.95236 0.82922 1.20675 0.99244 1.02209 0.95472 1.20975 0.97396 0.97038 0.92298 1.20262 0.96262 1.02515 0.96838 1.25102 1.00181 1.03580 0.89511 1.86560 1.48644 1.26303 1.74156 0.94170 0.80604 0.79676 0.79074 1.20999 0.98097 0.96163 0.94481 1.21425 0.99237 1.06401 0.95683 1.23603 0.99501 0.96260 0.99279 0.92532 0.90616 0.91863 0.92341 0.89743 0.92507 0.91634 0.90453 0.92229 0.89665 0.89141 0.91511 0.90635 0.84342 0.84657 0.91107 0.90652 0.84021 0.84218 0.85599 0.76561 1.21315 1.23064 0.83892 0.83997 0.90263 0.90366 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 0.33 8.38 71.98 0.60 0.94 16 2 C 0.10 -0.02 1.11 -10.80 -0.01 -0.03 16 3 C -0.14 0.07 8.84 71.98 0.64 0.71 16 4 C -0.18 0.44 8.38 71.98 0.60 1.04 16 5 O -0.38 -1.25 10.00 -148.98 -1.49 -2.74 16 6 C 0.06 -0.07 2.82 31.12 0.09 0.02 16 7 H 0.10 -0.38 5.54 -2.39 -0.01 -0.40 16 8 C -0.13 0.29 7.47 31.12 0.23 0.53 16 9 C -0.10 0.30 4.02 -10.27 -0.04 0.25 16 10 H 0.12 -0.59 8.14 -2.39 -0.02 -0.61 16 11 C 0.08 0.01 5.30 71.98 0.38 0.39 16 12 O -0.35 -0.33 10.22 -51.45 -0.53 -0.86 16 13 C 0.47 0.69 7.96 71.24 0.57 1.25 16 14 O -0.54 -4.12 15.73 21.97 0.35 -3.78 16 15 C -0.11 0.46 6.18 29.85 0.18 0.64 16 16 C 0.07 -0.07 4.03 71.98 0.29 0.22 16 17 O -0.32 -0.63 10.14 -92.34 -0.94 -1.56 16 18 C 0.12 0.37 6.69 22.51 0.15 0.52 16 19 C -0.16 -0.34 9.99 22.37 0.22 -0.12 16 20 C -0.06 -0.09 9.60 22.26 0.21 0.13 16 21 C -0.16 -0.14 5.39 -19.85 -0.11 -0.25 16 22 C -0.07 0.00 2.82 71.24 0.20 0.20 16 23 O -0.55 -1.67 12.76 -148.98 -1.90 -3.57 16 24 Si 0.76 -0.68 29.78 68.60 2.04 1.36 16 25 C -0.08 -0.03 8.66 22.25 0.19 0.16 16 26 C -0.21 -0.32 9.04 22.37 0.20 -0.12 16 27 C -0.15 0.21 7.47 31.12 0.23 0.44 16 28 H 0.06 -0.01 8.14 -2.38 -0.02 -0.03 16 29 H 0.07 -0.29 8.14 -2.38 -0.02 -0.31 16 30 H 0.06 -0.18 7.02 -2.39 -0.02 -0.19 16 31 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 32 H 0.08 -0.29 8.14 -2.39 -0.02 -0.31 16 33 H 0.06 0.05 8.14 -2.39 -0.02 0.03 16 34 H 0.06 -0.24 6.24 -2.38 -0.01 -0.26 16 35 H 0.08 -0.33 8.14 -2.39 -0.02 -0.35 16 36 H 0.06 -0.06 8.14 -2.38 -0.02 -0.08 16 37 H 0.08 -0.02 8.10 -2.39 -0.02 -0.04 16 38 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 39 H 0.07 0.12 7.84 -2.39 -0.02 0.10 16 40 H 0.08 0.01 8.13 -2.39 -0.02 -0.01 16 41 H 0.14 -1.07 8.14 -2.38 -0.02 -1.09 16 42 H 0.14 -0.97 8.14 -2.39 -0.02 -0.99 16 43 H 0.07 -0.02 7.62 -2.38 -0.02 -0.04 16 44 H 0.08 -0.07 7.62 -2.39 -0.02 -0.09 16 45 H 0.14 -0.03 8.06 -2.91 -0.02 -0.05 16 46 H 0.14 -0.04 8.06 -2.91 -0.02 -0.06 16 47 H 0.13 -0.23 7.96 -2.39 -0.02 -0.25 16 48 H 0.39 -0.84 8.70 -74.06 -0.64 -1.49 16 49 H -0.29 -0.94 7.11 99.48 0.71 -0.23 16 50 H -0.30 -2.04 7.11 99.48 0.71 -1.33 16 51 H 0.14 -0.47 4.87 -2.91 -0.01 -0.48 16 52 H 0.14 -0.11 6.30 -2.91 -0.02 -0.13 16 53 H 0.08 -0.20 8.14 -2.38 -0.02 -0.22 16 54 H 0.08 0.10 7.90 -2.39 -0.02 0.09 16 Total: 0.00 -16.13 434.67 2.66 -13.47 By element: Atomic # 1 Polarization: -9.53 SS G_CDS: 0.28 Total: -9.25 kcal Atomic # 6 Polarization: 2.08 SS G_CDS: 4.84 Total: 6.92 kcal Atomic # 8 Polarization: -8.00 SS G_CDS: -4.51 Total: -12.50 kcal Atomic # 14 Polarization: -0.68 SS G_CDS: 2.04 Total: 1.36 kcal Total: -16.13 2.66 -13.47 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_764628_14598394.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -135.925 kcal (2) G-P(sol) polarization free energy of solvation -16.129 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -152.054 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.658 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.472 kcal (6) G-S(sol) free energy of system = (1) + (5) -149.396 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.50 seconds