Wall clock time and date at job start Sat Mar 6 2021 08:44:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.42898 * 113.99839 * 2 1 4 4 C 1.53000 * 112.90784 * 66.13409 * 3 2 1 5 5 F 1.39899 * 109.47419 * 283.40093 * 4 3 2 6 6 F 1.39906 * 109.47059 * 43.40035 * 4 3 2 7 7 F 1.39901 * 109.47300 * 163.39432 * 4 3 2 8 8 C 1.53781 * 113.61476 * 294.88691 * 3 2 1 9 9 C 1.53777 * 87.17107 * 270.84036 * 8 3 2 10 10 H 1.09002 * 113.61484 * 220.05997 * 9 8 3 11 11 C 1.53001 * 113.61578 * 89.16096 * 9 8 3 12 12 O 1.45195 * 109.47439 * 175.00229 * 11 9 8 13 13 C 1.34231 * 117.00021 * 180.02562 * 12 11 9 14 14 O 1.20821 * 120.00094 * 359.97438 * 13 12 11 15 15 C 1.50704 * 119.99877 * 180.02562 * 13 12 11 16 16 C 1.52999 * 109.46986 * 179.97438 * 15 13 12 17 17 O 1.42902 * 109.47067 * 179.97438 * 16 15 13 18 18 C 1.35900 * 116.99957 * 179.97438 * 17 16 15 19 19 C 1.38731 * 120.05623 * 359.72821 * 18 17 16 20 20 C 1.38149 * 119.94593 * 179.74717 * 19 18 17 21 21 C 1.38264 * 120.05220 * 0.49868 * 20 19 18 22 22 C 1.50704 * 119.94582 * 179.74804 * 21 20 19 23 23 O 1.42900 * 109.46760 * 245.02720 * 22 21 20 24 24 Si 1.86302 * 109.46702 * 5.02477 * 22 21 20 25 25 C 1.38273 * 120.11375 * 359.77616 * 21 20 19 26 26 C 1.38142 * 120.05251 * 359.96925 * 25 21 20 27 27 C 1.53776 * 113.61475 * 197.38800 * 3 2 1 28 28 H 1.09000 * 109.46733 * 62.60858 * 1 2 3 29 29 H 1.09002 * 109.47037 * 182.59776 * 1 2 3 30 30 H 1.08994 * 109.47706 * 302.60234 * 1 2 3 31 31 H 1.08995 * 113.61619 * 25.43228 * 8 3 2 32 32 H 1.09002 * 113.61617 * 156.25290 * 8 3 2 33 33 H 1.09004 * 109.46910 * 294.99852 * 11 9 8 34 34 H 1.09006 * 109.47418 * 54.99544 * 11 9 8 35 35 H 1.08996 * 109.46918 * 299.99089 * 15 13 12 36 36 H 1.08992 * 109.47633 * 59.99602 * 15 13 12 37 37 H 1.08998 * 109.47121 * 299.99967 * 16 15 13 38 38 H 1.09000 * 109.47104 * 59.99314 * 16 15 13 39 39 H 1.08009 * 120.03016 * 359.97438 * 19 18 17 40 40 H 1.07996 * 119.97762 * 180.27579 * 20 19 18 41 41 H 1.08992 * 109.47073 * 125.02531 * 22 21 20 42 42 H 0.96693 * 114.00806 * 60.00212 * 23 22 21 43 43 H 1.48497 * 110.00006 * 58.68064 * 24 22 21 44 44 H 1.48503 * 109.99756 * 180.02562 * 24 22 21 45 45 H 1.07999 * 119.97431 * 179.97438 * 25 21 20 46 46 H 1.08001 * 120.02613 * 179.97438 * 26 25 21 47 47 H 1.08997 * 113.61455 * 203.66549 * 27 3 2 48 48 H 1.09001 * 113.61498 * 334.48263 * 27 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 1.7315 2.0814 1.2888 5 9 0.4161 2.5575 1.2714 6 9 1.9068 1.2358 2.3895 7 9 2.6169 3.1604 1.3843 8 6 1.7191 2.1094 -1.2782 9 6 2.9943 1.4858 -1.8696 10 1 3.5891 2.1840 -2.4586 11 6 2.7504 0.1574 -2.5885 12 8 3.9838 -0.2901 -3.2103 13 6 3.9399 -1.4487 -3.8866 14 8 2.9052 -2.0686 -3.9564 15 6 5.1815 -1.9768 -4.5580 16 6 4.8612 -3.3017 -5.2529 17 8 6.0383 -3.8021 -5.8901 18 6 5.9252 -4.9807 -6.5572 19 6 4.7076 -5.6447 -6.5930 20 6 4.5939 -6.8401 -7.2762 21 6 5.6947 -7.3798 -7.9153 22 6 5.5693 -8.6867 -8.6551 23 8 6.3745 -9.6770 -8.0124 24 14 3.7887 -9.2348 -8.6497 25 6 6.9108 -6.7228 -7.8763 26 6 7.0284 -5.5246 -7.1989 27 6 3.4891 1.3213 -0.4211 28 1 -0.3633 0.4728 -0.9125 29 1 -0.3633 -1.0266 0.0466 30 1 -0.3634 0.5537 0.8657 31 1 0.8060 1.8028 -1.7884 32 1 1.7845 3.1886 -1.1397 33 1 2.4149 -0.5891 -1.8685 34 1 1.9861 0.2933 -3.3538 35 1 5.5308 -1.2544 -5.2957 36 1 5.9584 -2.1374 -3.8107 37 1 4.5120 -4.0239 -4.5150 38 1 4.0841 -3.1414 -6.0003 39 1 3.8484 -5.2257 -6.0902 40 1 3.6452 -7.3552 -7.3081 41 1 5.9061 -8.5559 -9.6834 42 1 6.1307 -9.8457 -7.0921 43 1 2.9366 -8.1990 -9.2868 44 1 3.6517 -10.5230 -9.3757 45 1 7.7693 -7.1466 -8.3760 46 1 7.9785 -5.0120 -7.1684 47 1 4.0399 2.1850 -0.0486 48 1 4.0054 0.3790 -0.2379 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_764628_17321610.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 08:44:54 Heat of formation + Delta-G solvation = -286.286122 kcal Electronic energy + Delta-G solvation = -36059.790166 eV Core-core repulsion = 30440.663226 eV Total energy + Delta-G solvation = -5619.126939 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.142 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -51.21536 -48.76363 -48.64285 -41.99710 -41.39936 -41.03999 -39.24516 -37.93182 -37.18676 -36.98415 -33.68001 -32.09788 -31.53370 -30.77037 -28.42007 -27.70151 -26.97778 -26.55584 -25.67043 -23.75514 -23.35640 -22.30068 -21.75111 -20.77754 -19.86742 -19.60498 -19.49888 -19.28694 -18.64343 -18.13426 -18.03522 -17.40984 -17.29795 -16.98251 -16.95247 -16.60560 -16.44977 -15.91624 -15.91081 -15.70532 -15.57218 -15.56185 -15.32366 -15.10253 -15.01722 -14.81898 -14.81033 -14.71419 -14.54629 -14.33830 -14.26334 -14.13497 -13.81029 -13.54387 -13.48919 -13.30837 -13.01575 -12.98946 -12.85129 -12.48762 -12.21125 -12.11685 -12.04819 -11.89720 -11.86357 -11.74057 -11.70332 -11.61954 -10.92064 -10.40535 -10.03502 -9.21164 -5.03210 0.29564 0.31553 1.04002 1.16175 1.31053 1.50099 1.63999 1.93629 1.98207 2.23141 2.48041 2.56823 2.66977 2.77433 3.10349 3.23115 3.33537 3.41020 3.49580 3.53872 3.67577 3.69334 3.80471 3.81120 3.92537 4.03446 4.06859 4.10436 4.15684 4.18921 4.25398 4.27491 4.31108 4.35024 4.42380 4.43436 4.49942 4.50556 4.55455 4.60027 4.63108 4.70368 4.81155 4.95725 5.17369 5.26857 5.30282 5.50570 5.55783 5.70113 6.29567 6.56792 6.59440 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.010 3.990 2 O -0.332 6.332 3 C 0.037 3.963 4 C 0.438 3.562 5 F -0.181 7.181 6 F -0.174 7.174 7 F -0.174 7.174 8 C -0.143 4.143 9 C -0.101 4.101 10 H 0.109 0.891 11 C 0.078 3.922 12 O -0.351 6.351 13 C 0.472 3.528 14 O -0.505 6.505 15 C -0.115 4.115 16 C 0.070 3.930 17 O -0.313 6.313 18 C 0.137 3.863 19 C -0.203 4.203 20 C -0.074 4.074 21 C -0.158 4.158 22 C -0.062 4.062 23 O -0.541 6.541 24 Si 0.683 3.317 25 C -0.053 4.053 26 C -0.149 4.149 27 C -0.112 4.112 28 H 0.055 0.945 29 H 0.103 0.897 30 H 0.055 0.945 31 H 0.095 0.905 32 H 0.114 0.886 33 H 0.094 0.906 34 H 0.076 0.924 35 H 0.120 0.880 36 H 0.121 0.879 37 H 0.076 0.924 38 H 0.075 0.925 39 H 0.134 0.866 40 H 0.129 0.871 41 H 0.112 0.888 42 H 0.379 0.621 43 H -0.258 1.258 44 H -0.255 1.255 45 H 0.133 0.867 46 H 0.134 0.866 47 H 0.118 0.882 48 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.581 2.130 0.630 2.296 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 O -0.250 6.250 3 C -0.005 4.005 4 C 0.383 3.617 5 F -0.163 7.163 6 F -0.155 7.155 7 F -0.156 7.156 8 C -0.180 4.180 9 C -0.119 4.119 10 H 0.127 0.873 11 C 0.005 3.995 12 O -0.268 6.268 13 C 0.314 3.686 14 O -0.393 6.393 15 C -0.152 4.152 16 C -0.006 4.006 17 O -0.227 6.227 18 C 0.091 3.909 19 C -0.221 4.221 20 C -0.092 4.092 21 C -0.158 4.158 22 C -0.174 4.174 23 O -0.346 6.346 24 Si 0.585 3.415 25 C -0.071 4.071 26 C -0.167 4.167 27 C -0.149 4.149 28 H 0.074 0.926 29 H 0.121 0.879 30 H 0.074 0.926 31 H 0.114 0.886 32 H 0.132 0.868 33 H 0.112 0.888 34 H 0.095 0.905 35 H 0.138 0.862 36 H 0.139 0.861 37 H 0.095 0.905 38 H 0.093 0.907 39 H 0.152 0.848 40 H 0.147 0.853 41 H 0.130 0.870 42 H 0.226 0.774 43 H -0.183 1.183 44 H -0.180 1.180 45 H 0.151 0.849 46 H 0.152 0.848 47 H 0.136 0.864 48 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -1.093 1.728 -0.376 2.079 hybrid contribution -0.329 0.739 0.195 0.832 sum -1.422 2.467 -0.180 2.853 Atomic orbital electron populations 1.23162 0.79337 1.04551 1.01555 1.88091 1.21285 1.21804 1.93833 1.24042 1.00089 0.86427 0.89959 1.21155 0.74293 0.78705 0.87560 1.93189 1.37028 1.89214 1.96837 1.93226 1.94949 1.70551 1.56755 1.93182 1.68647 1.57178 1.96573 1.23595 0.99578 1.01200 0.93658 1.22145 0.97695 0.96419 0.95633 0.87323 1.23035 0.83804 0.95720 0.96982 1.86428 1.39271 1.38275 1.62819 1.23173 0.90261 0.78884 0.76257 1.90722 1.32923 1.57762 1.57879 1.21086 0.94969 0.97347 1.01840 1.22447 0.86548 0.94464 0.97104 1.85968 1.36014 1.35250 1.65456 1.18971 0.94141 0.85184 0.92571 1.21260 0.97347 0.98041 1.05483 1.20785 0.97572 0.95094 0.95751 1.20249 0.94403 0.98515 1.02653 1.24959 1.07693 0.86774 0.97924 1.86499 1.59930 1.57886 1.30333 0.94816 0.75522 0.80585 0.90568 1.20844 0.97208 0.92821 0.96217 1.20511 0.97874 0.97249 1.01108 1.23308 0.90943 1.05847 0.94818 0.92648 0.87890 0.92646 0.88641 0.86776 0.88831 0.90525 0.86195 0.86114 0.90545 0.90695 0.84801 0.85343 0.87028 0.77392 1.18320 1.17955 0.84882 0.84770 0.86380 0.88254 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 10.44 101.05 1.05 1.04 16 2 O -0.33 0.00 8.37 -35.23 -0.29 -0.29 16 3 C 0.04 -0.04 0.85 -89.81 -0.08 -0.12 16 4 C 0.44 0.25 2.52 37.16 0.09 0.35 16 5 F -0.18 -0.17 15.25 2.25 0.03 -0.14 16 6 F -0.17 -0.42 17.09 2.25 0.04 -0.38 16 7 F -0.17 -0.10 15.82 2.25 0.04 -0.06 16 8 C -0.14 0.43 6.51 -25.92 -0.17 0.26 16 9 C -0.10 0.28 4.22 -89.72 -0.38 -0.10 16 10 H 0.11 -0.40 8.14 -51.93 -0.42 -0.82 16 11 C 0.08 -0.09 5.05 37.16 0.19 0.10 16 12 O -0.35 0.14 10.22 -39.26 -0.40 -0.26 16 13 C 0.47 -0.01 7.96 36.01 0.29 0.27 16 14 O -0.51 -1.36 15.73 -18.75 -0.29 -1.66 16 15 C -0.11 0.27 6.18 -27.88 -0.17 0.10 16 16 C 0.07 -0.07 4.03 37.16 0.15 0.08 16 17 O -0.31 -0.22 10.14 -19.42 -0.20 -0.42 16 18 C 0.14 0.16 6.69 -39.22 -0.26 -0.10 16 19 C -0.20 -0.08 9.04 -39.43 -0.36 -0.44 16 20 C -0.07 0.00 8.66 -39.60 -0.34 -0.34 16 21 C -0.16 -0.07 5.35 -104.60 -0.56 -0.63 16 22 C -0.06 0.00 2.80 36.01 0.10 0.10 16 23 O -0.54 -0.25 12.83 -35.23 -0.45 -0.70 16 24 Si 0.68 -0.49 29.80 -169.99 -5.07 -5.55 16 25 C -0.05 -0.04 9.68 -39.60 -0.38 -0.42 16 26 C -0.15 -0.13 9.99 -39.43 -0.39 -0.53 16 27 C -0.11 0.24 6.89 -25.83 -0.18 0.06 16 28 H 0.05 -0.16 6.75 -51.93 -0.35 -0.51 16 29 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 30 H 0.05 -0.06 6.26 -51.93 -0.32 -0.39 16 31 H 0.10 -0.34 6.69 -51.93 -0.35 -0.69 16 32 H 0.11 -0.44 8.07 -51.93 -0.42 -0.86 16 33 H 0.09 0.00 6.13 -51.93 -0.32 -0.32 16 34 H 0.08 -0.10 8.13 -51.93 -0.42 -0.52 16 35 H 0.12 -0.44 8.14 -51.93 -0.42 -0.86 16 36 H 0.12 -0.44 8.14 -51.93 -0.42 -0.86 16 37 H 0.08 -0.08 7.61 -51.93 -0.39 -0.47 16 38 H 0.07 -0.07 7.63 -51.93 -0.40 -0.46 16 39 H 0.13 -0.12 6.30 -52.48 -0.33 -0.45 16 40 H 0.13 -0.25 4.90 -52.49 -0.26 -0.51 16 41 H 0.11 0.04 7.96 -51.93 -0.41 -0.37 16 42 H 0.38 -1.26 8.70 45.56 0.40 -0.86 16 43 H -0.26 -0.44 7.11 56.52 0.40 -0.04 16 44 H -0.25 -0.64 7.11 56.52 0.40 -0.24 16 45 H 0.13 -0.03 8.06 -52.49 -0.42 -0.45 16 46 H 0.13 -0.04 8.06 -52.49 -0.42 -0.46 16 47 H 0.12 -0.37 7.00 -51.93 -0.36 -0.73 16 48 H 0.10 -0.17 8.10 -51.93 -0.42 -0.59 16 LS Contribution 405.24 15.07 6.11 6.11 Total: 0.00 -7.84 405.24 -7.99 -15.83 By element: Atomic # 1 Polarization: -6.08 SS G_CDS: -6.10 Total: -12.18 kcal Atomic # 6 Polarization: 1.10 SS G_CDS: -1.40 Total: -0.30 kcal Atomic # 8 Polarization: -1.69 SS G_CDS: -1.64 Total: -3.33 kcal Atomic # 9 Polarization: -0.68 SS G_CDS: 0.11 Total: -0.58 kcal Atomic # 14 Polarization: -0.49 SS G_CDS: -5.07 Total: -5.55 kcal Total LS contribution 6.11 Total: 6.11 kcal Total: -7.84 -7.99 -15.83 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_764628_17321610.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -270.456 kcal (2) G-P(sol) polarization free energy of solvation -7.844 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -278.300 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.987 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.831 kcal (6) G-S(sol) free energy of system = (1) + (5) -286.286 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds