Wall clock time and date at job start Sat Mar 6 2021 08:44:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.42898 * 113.99839 * 2 1 4 4 C 1.53000 * 112.90784 * 66.13409 * 3 2 1 5 5 F 1.39899 * 109.47419 * 283.40093 * 4 3 2 6 6 F 1.39906 * 109.47059 * 43.40035 * 4 3 2 7 7 F 1.39901 * 109.47300 * 163.39432 * 4 3 2 8 8 C 1.53781 * 113.61476 * 294.88691 * 3 2 1 9 9 C 1.53777 * 87.17107 * 270.84036 * 8 3 2 10 10 H 1.09002 * 113.61484 * 220.05997 * 9 8 3 11 11 C 1.53001 * 113.61578 * 89.16096 * 9 8 3 12 12 O 1.45195 * 109.47439 * 175.00229 * 11 9 8 13 13 C 1.34231 * 117.00021 * 180.02562 * 12 11 9 14 14 O 1.20821 * 120.00094 * 359.97438 * 13 12 11 15 15 C 1.50704 * 119.99877 * 180.02562 * 13 12 11 16 16 C 1.52999 * 109.46986 * 179.97438 * 15 13 12 17 17 O 1.42902 * 109.47067 * 179.97438 * 16 15 13 18 18 C 1.35900 * 116.99957 * 179.97438 * 17 16 15 19 19 C 1.38731 * 120.05623 * 359.72821 * 18 17 16 20 20 C 1.38149 * 119.94593 * 179.74717 * 19 18 17 21 21 C 1.38264 * 120.05220 * 0.49868 * 20 19 18 22 22 C 1.50704 * 119.94582 * 179.74804 * 21 20 19 23 23 O 1.42900 * 109.46760 * 245.02720 * 22 21 20 24 24 Si 1.86302 * 109.46702 * 5.02477 * 22 21 20 25 25 C 1.38273 * 120.11375 * 359.77616 * 21 20 19 26 26 C 1.38142 * 120.05251 * 359.96925 * 25 21 20 27 27 C 1.53776 * 113.61475 * 197.38800 * 3 2 1 28 28 H 1.09000 * 109.46733 * 62.60858 * 1 2 3 29 29 H 1.09002 * 109.47037 * 182.59776 * 1 2 3 30 30 H 1.08994 * 109.47706 * 302.60234 * 1 2 3 31 31 H 1.08995 * 113.61619 * 25.43228 * 8 3 2 32 32 H 1.09002 * 113.61617 * 156.25290 * 8 3 2 33 33 H 1.09004 * 109.46910 * 294.99852 * 11 9 8 34 34 H 1.09006 * 109.47418 * 54.99544 * 11 9 8 35 35 H 1.08996 * 109.46918 * 299.99089 * 15 13 12 36 36 H 1.08992 * 109.47633 * 59.99602 * 15 13 12 37 37 H 1.08998 * 109.47121 * 299.99967 * 16 15 13 38 38 H 1.09000 * 109.47104 * 59.99314 * 16 15 13 39 39 H 1.08009 * 120.03016 * 359.97438 * 19 18 17 40 40 H 1.07996 * 119.97762 * 180.27579 * 20 19 18 41 41 H 1.08992 * 109.47073 * 125.02531 * 22 21 20 42 42 H 0.96693 * 114.00806 * 60.00212 * 23 22 21 43 43 H 1.48497 * 110.00006 * 58.68064 * 24 22 21 44 44 H 1.48503 * 109.99756 * 180.02562 * 24 22 21 45 45 H 1.07999 * 119.97431 * 179.97438 * 25 21 20 46 46 H 1.08001 * 120.02613 * 179.97438 * 26 25 21 47 47 H 1.08997 * 113.61455 * 203.66549 * 27 3 2 48 48 H 1.09001 * 113.61498 * 334.48263 * 27 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 1.7315 2.0814 1.2888 5 9 0.4161 2.5575 1.2714 6 9 1.9068 1.2358 2.3895 7 9 2.6169 3.1604 1.3843 8 6 1.7191 2.1094 -1.2782 9 6 2.9943 1.4858 -1.8696 10 1 3.5891 2.1840 -2.4586 11 6 2.7504 0.1574 -2.5885 12 8 3.9838 -0.2901 -3.2103 13 6 3.9399 -1.4487 -3.8866 14 8 2.9052 -2.0686 -3.9564 15 6 5.1815 -1.9768 -4.5580 16 6 4.8612 -3.3017 -5.2529 17 8 6.0383 -3.8021 -5.8901 18 6 5.9252 -4.9807 -6.5572 19 6 4.7076 -5.6447 -6.5930 20 6 4.5939 -6.8401 -7.2762 21 6 5.6947 -7.3798 -7.9153 22 6 5.5693 -8.6867 -8.6551 23 8 6.3745 -9.6770 -8.0124 24 14 3.7887 -9.2348 -8.6497 25 6 6.9108 -6.7228 -7.8763 26 6 7.0284 -5.5246 -7.1989 27 6 3.4891 1.3213 -0.4211 28 1 -0.3633 0.4728 -0.9125 29 1 -0.3633 -1.0266 0.0466 30 1 -0.3634 0.5537 0.8657 31 1 0.8060 1.8028 -1.7884 32 1 1.7845 3.1886 -1.1397 33 1 2.4149 -0.5891 -1.8685 34 1 1.9861 0.2933 -3.3538 35 1 5.5308 -1.2544 -5.2957 36 1 5.9584 -2.1374 -3.8107 37 1 4.5120 -4.0239 -4.5150 38 1 4.0841 -3.1414 -6.0003 39 1 3.8484 -5.2257 -6.0902 40 1 3.6452 -7.3552 -7.3081 41 1 5.9061 -8.5559 -9.6834 42 1 6.1307 -9.8457 -7.0921 43 1 2.9366 -8.1990 -9.2868 44 1 3.6517 -10.5230 -9.3757 45 1 7.7693 -7.1466 -8.3760 46 1 7.9785 -5.0120 -7.1684 47 1 4.0399 2.1850 -0.0486 48 1 4.0054 0.3790 -0.2379 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_764628_17321610.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 08:44:53 Heat of formation + Delta-G solvation = -281.916381 kcal Electronic energy + Delta-G solvation = -36059.600680 eV Core-core repulsion = 30440.663226 eV Total energy + Delta-G solvation = -5618.937453 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.142 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -51.26790 -48.80088 -48.73770 -41.92712 -41.34474 -40.99536 -39.23096 -37.89861 -37.17500 -36.90274 -33.59906 -32.08647 -31.52551 -30.67977 -28.26639 -27.65727 -26.79073 -26.53427 -25.62261 -23.73378 -23.28765 -22.29888 -21.69047 -20.65655 -19.83726 -19.58763 -19.53709 -19.25625 -18.62893 -18.12854 -17.97806 -17.28695 -17.22486 -16.97129 -16.90876 -16.50696 -16.44435 -15.91362 -15.86342 -15.68085 -15.62408 -15.55154 -15.29630 -15.14122 -14.95714 -14.86844 -14.85565 -14.70523 -14.51019 -14.32138 -14.25572 -14.05867 -13.75761 -13.54317 -13.31411 -13.16921 -12.92343 -12.90711 -12.72243 -12.37470 -12.21380 -12.05144 -12.03530 -11.83365 -11.76084 -11.71111 -11.66826 -11.56120 -10.81485 -10.41146 -10.04223 -9.22515 -5.01012 0.27951 0.30571 1.06780 1.24809 1.32360 1.52226 1.62591 1.95494 2.07206 2.29782 2.55594 2.61748 2.65814 2.88147 3.27870 3.28877 3.42509 3.50680 3.56609 3.65978 3.73627 3.83338 3.84458 3.89384 3.98933 4.21788 4.22430 4.23562 4.27583 4.31641 4.37292 4.41451 4.47258 4.50396 4.50688 4.60607 4.62113 4.64631 4.68907 4.75501 4.77978 4.82319 4.97668 5.01431 5.17327 5.27441 5.36561 5.49953 5.69283 5.71020 6.30326 6.59996 6.78854 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.005 3.995 2 O -0.347 6.347 3 C 0.031 3.969 4 C 0.433 3.567 5 F -0.185 7.185 6 F -0.188 7.188 7 F -0.175 7.175 8 C -0.135 4.135 9 C -0.092 4.092 10 H 0.124 0.876 11 C 0.076 3.924 12 O -0.351 6.351 13 C 0.473 3.527 14 O -0.537 6.537 15 C -0.108 4.108 16 C 0.068 3.932 17 O -0.319 6.319 18 C 0.123 3.877 19 C -0.208 4.208 20 C -0.078 4.078 21 C -0.162 4.162 22 C -0.067 4.067 23 O -0.556 6.556 24 Si 0.769 3.231 25 C -0.061 4.061 26 C -0.158 4.158 27 C -0.112 4.112 28 H 0.069 0.931 29 H 0.109 0.891 30 H 0.048 0.952 31 H 0.102 0.898 32 H 0.127 0.873 33 H 0.080 0.920 34 H 0.078 0.922 35 H 0.137 0.863 36 H 0.137 0.863 37 H 0.074 0.926 38 H 0.072 0.928 39 H 0.144 0.856 40 H 0.147 0.853 41 H 0.106 0.894 42 H 0.395 0.605 43 H -0.288 1.288 44 H -0.299 1.299 45 H 0.138 0.862 46 H 0.141 0.859 47 H 0.129 0.871 48 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.349 2.834 0.473 2.894 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 O -0.265 6.265 3 C -0.011 4.011 4 C 0.379 3.621 5 F -0.166 7.166 6 F -0.170 7.170 7 F -0.156 7.156 8 C -0.173 4.173 9 C -0.110 4.110 10 H 0.142 0.858 11 C 0.002 3.998 12 O -0.267 6.267 13 C 0.318 3.682 14 O -0.427 6.427 15 C -0.145 4.145 16 C -0.007 4.007 17 O -0.233 6.233 18 C 0.078 3.922 19 C -0.227 4.227 20 C -0.096 4.096 21 C -0.163 4.163 22 C -0.177 4.177 23 O -0.364 6.364 24 Si 0.676 3.324 25 C -0.079 4.079 26 C -0.177 4.177 27 C -0.149 4.149 28 H 0.087 0.913 29 H 0.127 0.873 30 H 0.066 0.934 31 H 0.121 0.879 32 H 0.145 0.855 33 H 0.098 0.902 34 H 0.096 0.904 35 H 0.155 0.845 36 H 0.155 0.845 37 H 0.093 0.907 38 H 0.090 0.910 39 H 0.162 0.838 40 H 0.164 0.836 41 H 0.124 0.876 42 H 0.245 0.755 43 H -0.215 1.215 44 H -0.228 1.228 45 H 0.156 0.844 46 H 0.159 0.841 47 H 0.147 0.853 48 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -0.839 2.450 -0.500 2.637 hybrid contribution -0.409 0.510 0.254 0.702 sum -1.248 2.960 -0.247 3.222 Atomic orbital electron populations 1.23266 0.78795 1.05075 1.01908 1.88074 1.22033 1.22581 1.93854 1.24249 1.00929 0.86260 0.89682 1.21507 0.74103 0.78711 0.87822 1.93177 1.37340 1.89274 1.96849 1.93190 1.95027 1.71035 1.57724 1.93174 1.68619 1.57221 1.96600 1.23645 0.99814 1.01648 0.92151 1.22085 0.97983 0.95780 0.95186 0.85780 1.23090 0.83710 0.96169 0.96806 1.86433 1.39582 1.38078 1.62633 1.23588 0.90448 0.78547 0.75653 1.90710 1.34255 1.58598 1.59122 1.21100 0.94132 0.96885 1.02370 1.22495 0.86105 0.95079 0.96991 1.85946 1.36719 1.35126 1.65519 1.19149 0.94545 0.85550 0.92933 1.21442 0.97528 0.98175 1.05520 1.20997 0.98167 0.95068 0.95324 1.20334 0.94539 0.98638 1.02768 1.25055 1.08244 0.86721 0.97673 1.86460 1.60343 1.57867 1.31771 0.93818 0.73262 0.76346 0.88992 1.20977 0.97616 0.92932 0.96362 1.20665 0.98284 0.97470 1.01250 1.23386 0.90340 1.05978 0.95218 0.91276 0.87284 0.93376 0.87924 0.85473 0.90186 0.90359 0.84493 0.84532 0.90729 0.90955 0.83808 0.83626 0.87641 0.75539 1.21529 1.22751 0.84422 0.84084 0.85305 0.88962 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 -0.01 10.44 113.37 1.18 1.17 16 2 O -0.35 -0.19 8.37 -148.98 -1.25 -1.44 16 3 C 0.03 -0.06 0.85 -10.27 -0.01 -0.07 16 4 C 0.43 0.65 2.52 71.98 0.18 0.83 16 5 F -0.18 -0.41 15.25 44.97 0.69 0.28 16 6 F -0.19 -1.09 17.09 44.97 0.77 -0.32 16 7 F -0.17 -0.18 15.82 44.97 0.71 0.53 16 8 C -0.14 0.92 6.51 31.12 0.20 1.13 16 9 C -0.09 0.58 4.22 -10.21 -0.04 0.54 16 10 H 0.12 -1.13 8.14 -2.39 -0.02 -1.15 16 11 C 0.08 -0.18 5.05 71.98 0.36 0.19 16 12 O -0.35 0.41 10.22 -51.43 -0.53 -0.11 16 13 C 0.47 -0.07 7.96 71.24 0.57 0.49 16 14 O -0.54 -3.17 15.73 21.98 0.35 -2.83 16 15 C -0.11 0.58 6.18 29.85 0.18 0.77 16 16 C 0.07 -0.14 4.03 71.98 0.29 0.15 16 17 O -0.32 -0.41 10.14 -92.42 -0.94 -1.35 16 18 C 0.12 0.31 6.69 22.51 0.15 0.46 16 19 C -0.21 -0.16 9.04 22.37 0.20 0.05 16 20 C -0.08 0.03 8.66 22.25 0.19 0.22 16 21 C -0.16 -0.13 5.35 -19.85 -0.11 -0.24 16 22 C -0.07 0.00 2.80 71.24 0.20 0.20 16 23 O -0.56 -0.40 12.83 -148.98 -1.91 -2.31 16 24 Si 0.77 -1.07 29.80 68.60 2.04 0.98 16 25 C -0.06 -0.10 9.68 22.25 0.22 0.12 16 26 C -0.16 -0.32 9.99 22.37 0.22 -0.10 16 27 C -0.11 0.52 6.89 31.18 0.21 0.73 16 28 H 0.07 -0.41 6.75 -2.39 -0.02 -0.43 16 29 H 0.11 -0.50 8.14 -2.39 -0.02 -0.52 16 30 H 0.05 -0.07 6.26 -2.39 -0.01 -0.08 16 31 H 0.10 -0.83 6.69 -2.39 -0.02 -0.85 16 32 H 0.13 -1.17 8.07 -2.39 -0.02 -1.19 16 33 H 0.08 0.06 6.13 -2.38 -0.01 0.04 16 34 H 0.08 -0.21 8.13 -2.38 -0.02 -0.23 16 35 H 0.14 -1.18 8.14 -2.39 -0.02 -1.20 16 36 H 0.14 -1.15 8.14 -2.39 -0.02 -1.17 16 37 H 0.07 -0.13 7.61 -2.39 -0.02 -0.15 16 38 H 0.07 -0.12 7.63 -2.39 -0.02 -0.13 16 39 H 0.14 -0.27 6.30 -2.91 -0.02 -0.29 16 40 H 0.15 -0.68 4.90 -2.91 -0.01 -0.70 16 41 H 0.11 0.12 7.96 -2.39 -0.02 0.10 16 42 H 0.39 -2.84 8.70 -74.06 -0.64 -3.48 16 43 H -0.29 -1.04 7.11 99.48 0.71 -0.33 16 44 H -0.30 -1.83 7.11 99.48 0.71 -1.12 16 45 H 0.14 0.00 8.06 -2.91 -0.02 -0.03 16 46 H 0.14 -0.04 8.06 -2.91 -0.02 -0.06 16 47 H 0.13 -0.90 7.00 -2.39 -0.02 -0.91 16 48 H 0.09 -0.28 8.10 -2.39 -0.02 -0.30 16 Total: 0.00 -18.70 405.24 4.57 -14.13 By element: Atomic # 1 Polarization: -14.61 SS G_CDS: 0.42 Total: -14.19 kcal Atomic # 6 Polarization: 2.42 SS G_CDS: 4.21 Total: 6.63 kcal Atomic # 8 Polarization: -3.76 SS G_CDS: -4.28 Total: -8.04 kcal Atomic # 9 Polarization: -1.68 SS G_CDS: 2.17 Total: 0.49 kcal Atomic # 14 Polarization: -1.07 SS G_CDS: 2.04 Total: 0.98 kcal Total: -18.70 4.57 -14.13 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_764628_17321610.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -267.788 kcal (2) G-P(sol) polarization free energy of solvation -18.697 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -286.485 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.569 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.129 kcal (6) G-S(sol) free energy of system = (1) + (5) -281.916 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds