Wall clock time and date at job start Sat Mar 6 2021 09:26:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.53002 * 109.46911 * 2 1 4 4 C 1.53001 * 109.46886 * 119.99531 * 2 1 3 5 5 H 1.08992 * 109.47514 * 300.00434 * 4 2 1 6 6 C 1.53002 * 109.46637 * 60.00305 * 4 2 1 7 7 C 1.52997 * 109.46817 * 179.97438 * 6 4 2 8 8 C 1.53005 * 109.47452 * 300.00239 * 7 6 4 9 9 H 1.09002 * 109.46935 * 300.00125 * 8 7 6 10 10 C 1.50703 * 109.47304 * 180.02562 * 8 7 6 11 11 O 1.20819 * 119.99646 * 0.02562 * 10 8 7 12 12 O 1.34229 * 119.99682 * 179.97438 * 10 8 7 13 13 C 1.45203 * 116.99579 * 179.97438 * 12 10 8 14 14 C 1.50693 * 109.46984 * 180.02562 * 13 12 10 15 15 C 1.38937 * 120.04313 * 179.97438 * 14 13 12 16 16 O 1.34889 * 120.98231 * 0.02853 * 15 14 13 17 17 C 1.33714 * 122.40630 * 180.02562 * 16 15 14 18 18 C 1.34542 * 122.85974 * 359.95802 * 17 16 15 19 19 C 1.50699 * 120.20044 * 180.02562 * 18 17 16 20 20 O 1.42903 * 109.46729 * 249.97019 * 19 18 17 21 21 Si 1.86291 * 109.47264 * 9.97353 * 19 18 17 22 22 C 1.41995 * 119.59328 * 0.02562 * 18 17 16 23 23 O 1.21917 * 121.40497 * 179.97438 * 22 18 17 24 24 C 1.40455 * 119.34175 * 180.02562 * 15 14 13 25 25 C 1.39341 * 120.23788 * 359.97438 * 24 15 14 26 26 C 1.37888 * 119.52604 * 0.02562 * 25 24 15 27 27 Br 1.89102 * 119.86287 * 180.02562 * 26 25 24 28 28 C 1.37875 * 120.04132 * 359.72749 * 14 13 12 29 29 C 1.52999 * 109.47159 * 59.99536 * 8 7 6 30 30 C 1.52997 * 109.47317 * 300.00546 * 29 8 7 31 31 H 1.09001 * 109.47583 * 300.00736 * 1 2 3 32 32 H 1.09004 * 109.46724 * 60.00450 * 1 2 3 33 33 H 1.08992 * 109.47098 * 179.97438 * 1 2 3 34 34 H 1.09002 * 109.47398 * 240.00028 * 2 1 3 35 35 H 1.09000 * 109.47312 * 299.99799 * 3 2 1 36 36 H 1.09002 * 109.47067 * 59.99825 * 3 2 1 37 37 H 1.09004 * 109.46930 * 179.97438 * 3 2 1 38 38 H 1.08993 * 109.47662 * 299.99908 * 6 4 2 39 39 H 1.09002 * 109.47075 * 60.00414 * 6 4 2 40 40 H 1.09002 * 109.47153 * 60.00231 * 7 6 4 41 41 H 1.09001 * 109.47289 * 180.02562 * 7 6 4 42 42 H 1.09003 * 109.46952 * 300.00275 * 13 12 10 43 43 H 1.09000 * 109.47246 * 60.00167 * 13 12 10 44 44 H 1.07994 * 118.57083 * 179.97438 * 17 16 15 45 45 H 1.09002 * 109.46942 * 129.97827 * 19 18 17 46 46 H 0.96694 * 113.99923 * 179.97438 * 20 19 18 47 47 H 1.48502 * 110.00174 * 178.68201 * 21 19 18 48 48 H 1.48506 * 110.00130 * 300.00190 * 21 19 18 49 49 H 1.08009 * 120.23985 * 180.02562 * 25 24 15 50 50 H 1.07999 * 119.64504 * 359.97000 * 28 14 13 51 51 H 1.08996 * 109.46929 * 179.97438 * 29 8 7 52 52 H 1.09002 * 109.46716 * 60.00455 * 29 8 7 53 53 H 1.09002 * 109.47153 * 299.99641 * 30 29 8 54 54 H 1.09001 * 109.46832 * 179.97438 * 30 29 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0399 -0.7212 1.2493 5 1 1.6766 -0.2074 2.1392 6 6 1.5299 -2.1637 1.2493 7 6 2.0403 -2.8850 2.4982 8 6 3.5704 -2.8850 2.4978 9 1 3.9335 -3.3987 1.6076 10 6 4.0731 -3.5961 3.7277 11 8 3.2882 -4.0561 4.5227 12 8 5.3929 -3.7193 3.9393 13 6 5.8050 -4.4156 5.1450 14 6 7.3099 -4.4551 5.2128 15 6 7.9419 -5.0735 6.2844 16 8 7.2280 -5.6458 7.2755 17 6 7.8065 -6.2479 8.3199 18 6 9.1412 -6.3325 8.4665 19 6 9.7295 -7.0259 9.6682 20 8 10.3402 -6.0586 10.5246 21 14 8.3793 -7.9126 10.5962 22 6 9.9921 -5.7643 7.4819 23 8 11.2059 -5.8214 7.5817 24 6 9.3454 -5.1013 6.3330 25 6 10.0944 -4.5143 5.3152 26 6 9.4481 -3.9055 4.2602 27 35 10.4553 -3.1066 2.8734 28 6 8.0613 -3.8821 4.2088 29 6 4.0804 -1.4425 2.4977 30 6 3.5699 -0.7212 1.2488 31 1 -0.3634 0.5139 0.8899 32 1 -0.3633 0.5138 -0.8901 33 1 -0.3633 -1.0276 -0.0005 34 1 1.8934 -0.5138 -0.8900 35 1 1.6767 1.9564 -0.8900 36 1 1.6766 1.9564 0.8900 37 1 3.1300 1.4425 0.0005 38 1 0.4400 -2.1638 1.2492 39 1 1.8934 -2.6775 0.3593 40 1 1.6773 -2.3713 3.3884 41 1 1.6774 -3.9129 2.4980 42 1 5.4159 -3.8918 6.0181 43 1 5.4149 -5.4333 5.1282 44 1 7.1748 -6.6856 9.0787 45 1 10.4792 -7.7464 9.3410 46 1 10.7403 -6.4349 11.3205 47 1 8.9514 -8.6268 11.7658 48 1 7.3507 -6.9412 11.0476 49 1 11.1737 -4.5360 5.3523 50 1 7.5654 -3.4065 3.3756 51 1 5.1703 -1.4426 2.4979 52 1 3.7173 -0.9288 3.3879 53 1 3.9330 -1.2349 0.3586 54 1 3.9329 0.3066 1.2490 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_7763832_484008.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 09:26:19 Heat of formation + Delta-G solvation = -141.817664 kcal Electronic energy + Delta-G solvation = -38127.419001 eV Core-core repulsion = 33042.884568 eV Total energy + Delta-G solvation = -5084.534433 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 465.096 amu Computer time = 1.81 seconds Orbital eigenvalues (eV) -43.35138 -41.88274 -40.16766 -40.10460 -39.64415 -37.98245 -37.68496 -35.92610 -34.74379 -33.74027 -33.19069 -31.85333 -30.98465 -30.70343 -28.28468 -27.96130 -27.50049 -26.00148 -25.06989 -24.35227 -23.37107 -22.62880 -22.17511 -20.90558 -20.61241 -20.56620 -19.59176 -18.82473 -18.71401 -18.42416 -17.86869 -17.74154 -17.41371 -16.81401 -16.50504 -16.34561 -16.20441 -15.79819 -15.57332 -15.50205 -15.39039 -15.18848 -15.04001 -14.99642 -14.60339 -14.44039 -14.37418 -14.22289 -14.02227 -13.90260 -13.81832 -13.33672 -13.28933 -13.04745 -12.96166 -12.76132 -12.66983 -12.52874 -12.27819 -12.26958 -12.01620 -11.99718 -11.97912 -11.81673 -11.58353 -11.52848 -11.49852 -11.26056 -11.20041 -10.89414 -10.75070 -10.69937 -10.50998 -10.42683 -9.59161 -5.01733 -0.86208 -0.71249 0.02062 0.33420 0.95453 1.11866 1.14887 1.38894 1.40032 1.52350 1.87578 2.25154 2.66689 2.83958 3.09970 3.29030 3.42793 3.50369 3.63668 3.70368 3.72145 3.73152 3.83530 3.92423 3.96833 4.06314 4.08438 4.09798 4.13642 4.21107 4.29087 4.34254 4.37485 4.43064 4.56867 4.57984 4.58913 4.63676 4.65354 4.68174 4.71625 4.77529 4.85494 4.89007 5.02186 5.05789 5.06696 5.11919 5.16194 5.18081 5.25503 5.26031 5.31626 5.32967 5.43908 5.46968 5.60786 5.68775 5.73383 6.28842 6.51795 6.64001 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C -0.090 4.090 3 C -0.151 4.151 4 C -0.083 4.083 5 H 0.063 0.937 6 C -0.111 4.111 7 C -0.101 4.101 8 C -0.073 4.073 9 H 0.130 0.870 10 C 0.472 3.528 11 O -0.531 6.531 12 O -0.350 6.350 13 C 0.116 3.884 14 C -0.097 4.097 15 C 0.164 3.836 16 O -0.201 6.201 17 C 0.169 3.831 18 C -0.297 4.297 19 C -0.076 4.076 20 O -0.560 6.560 21 Si 0.781 3.219 22 C 0.425 3.575 23 O -0.494 6.494 24 C -0.226 4.226 25 C -0.008 4.008 26 C -0.120 4.120 27 Br -0.023 7.023 28 C -0.006 4.006 29 C -0.108 4.108 30 C -0.112 4.112 31 H 0.049 0.951 32 H 0.051 0.949 33 H 0.060 0.940 34 H 0.073 0.927 35 H 0.050 0.950 36 H 0.049 0.951 37 H 0.063 0.937 38 H 0.071 0.929 39 H 0.074 0.926 40 H 0.058 0.942 41 H 0.065 0.935 42 H 0.097 0.903 43 H 0.103 0.897 44 H 0.238 0.762 45 H 0.076 0.924 46 H 0.395 0.605 47 H -0.281 1.281 48 H -0.259 1.259 49 H 0.146 0.854 50 H 0.178 0.822 51 H 0.086 0.914 52 H 0.060 0.940 53 H 0.076 0.924 54 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.756 -1.718 -2.909 6.674 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C -0.108 4.108 3 C -0.208 4.208 4 C -0.101 4.101 5 H 0.081 0.919 6 C -0.149 4.149 7 C -0.139 4.139 8 C -0.092 4.092 9 H 0.148 0.852 10 C 0.316 3.684 11 O -0.420 6.420 12 O -0.267 6.267 13 C 0.043 3.957 14 C -0.098 4.098 15 C 0.118 3.882 16 O -0.104 6.104 17 C 0.104 3.896 18 C -0.300 4.300 19 C -0.181 4.181 20 O -0.371 6.371 21 Si 0.681 3.319 22 C 0.311 3.689 23 O -0.377 6.377 24 C -0.229 4.229 25 C -0.028 4.028 26 C -0.200 4.200 27 Br 0.063 6.937 28 C -0.025 4.025 29 C -0.145 4.145 30 C -0.149 4.149 31 H 0.068 0.932 32 H 0.070 0.930 33 H 0.079 0.921 34 H 0.091 0.909 35 H 0.069 0.931 36 H 0.068 0.932 37 H 0.082 0.918 38 H 0.089 0.911 39 H 0.093 0.907 40 H 0.077 0.923 41 H 0.084 0.916 42 H 0.115 0.885 43 H 0.121 0.879 44 H 0.254 0.746 45 H 0.094 0.906 46 H 0.245 0.755 47 H -0.207 1.207 48 H -0.186 1.186 49 H 0.164 0.836 50 H 0.195 0.805 51 H 0.105 0.895 52 H 0.079 0.921 53 H 0.094 0.906 54 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges -5.813 -1.248 -2.872 6.602 hybrid contribution 1.438 0.201 1.501 2.088 sum -4.375 -1.047 -1.371 4.703 Atomic orbital electron populations 1.21920 0.95592 1.01974 1.01446 1.21121 0.95476 0.96111 0.98115 1.21916 1.01522 0.95977 1.01433 1.21227 0.95587 0.95463 0.97833 0.91893 1.21635 1.01015 0.95008 0.97203 1.21419 0.91866 1.01419 0.99212 1.21259 0.97145 0.97420 0.93406 0.85213 1.24306 0.79653 0.76506 0.87942 1.90695 1.57167 1.46755 1.47371 1.86406 1.26413 1.70523 1.43352 1.21553 0.88682 0.99024 0.86457 1.18838 0.95277 1.02348 0.93359 1.18917 0.88406 0.93358 0.87547 1.83172 1.38703 1.60442 1.28080 1.24391 0.93720 0.86041 0.85497 1.20962 0.94403 1.12923 1.01685 1.24941 1.06544 0.94303 0.92334 1.86547 1.76413 1.36386 1.37709 0.94481 0.76419 0.79548 0.81492 1.18740 0.88924 0.77068 0.84163 1.90721 1.16578 1.53502 1.76940 1.20710 0.92985 1.08592 1.00579 1.21118 1.01196 0.90693 0.89770 1.21860 0.95137 1.05891 0.97098 1.96841 1.71460 1.80252 1.45149 1.21242 0.90586 0.93110 0.97590 1.21536 1.01847 0.91659 0.99496 1.21641 0.94698 1.01115 0.97468 0.93178 0.93027 0.92066 0.90897 0.93079 0.93175 0.91809 0.91070 0.90734 0.92318 0.91593 0.88476 0.87864 0.74627 0.90583 0.75452 1.20711 1.18589 0.83595 0.80479 0.89522 0.92126 0.90567 0.90688 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.48 8.84 71.98 0.64 1.11 16 2 C -0.09 0.38 2.51 -10.79 -0.03 0.35 16 3 C -0.15 0.55 8.84 71.98 0.64 1.18 16 4 C -0.08 0.40 1.78 -10.79 -0.02 0.39 16 5 H 0.06 -0.17 8.14 -2.39 -0.02 -0.19 16 6 C -0.11 0.55 4.85 30.59 0.15 0.70 16 7 C -0.10 0.28 4.49 30.60 0.14 0.41 16 8 C -0.07 0.33 2.63 -11.54 -0.03 0.30 16 9 H 0.13 -1.05 8.14 -2.39 -0.02 -1.06 16 10 C 0.47 -0.01 7.26 71.24 0.52 0.51 16 11 O -0.53 -3.33 15.73 21.98 0.35 -2.99 16 12 O -0.35 0.78 8.58 -51.41 -0.44 0.34 16 13 C 0.12 -0.31 5.38 71.23 0.38 0.07 16 14 C -0.10 0.13 5.89 -19.78 -0.12 0.02 16 15 C 0.16 0.15 6.74 22.98 0.15 0.30 16 16 O -0.20 0.50 9.21 -2.78 -0.03 0.48 16 17 C 0.17 -0.64 9.99 66.97 0.67 0.03 16 18 C -0.30 -0.91 5.35 -19.78 -0.11 -1.02 16 19 C -0.08 -0.09 2.45 71.24 0.17 0.08 16 20 O -0.56 -3.14 12.86 -148.98 -1.92 -5.05 16 21 Si 0.78 -4.99 30.01 68.60 2.06 -2.93 16 22 C 0.42 4.05 6.98 25.67 0.18 4.23 16 23 O -0.49 -8.35 16.93 -5.05 -0.09 -8.44 16 24 C -0.23 -1.24 5.89 -20.01 -0.12 -1.36 16 25 C -0.01 -0.04 9.40 22.45 0.21 0.17 16 26 C -0.12 -0.19 6.22 22.32 0.14 -0.05 16 27 Br -0.02 -0.03 33.69 -20.37 -0.69 -0.71 16 28 C -0.01 0.01 9.10 22.32 0.20 0.21 16 29 C -0.11 0.63 5.14 30.59 0.16 0.79 16 30 C -0.11 0.73 4.85 30.59 0.15 0.88 16 31 H 0.05 -0.11 8.14 -2.39 -0.02 -0.13 16 32 H 0.05 -0.13 8.14 -2.39 -0.02 -0.15 16 33 H 0.06 -0.23 6.43 -2.39 -0.02 -0.24 16 34 H 0.07 -0.32 8.14 -2.39 -0.02 -0.34 16 35 H 0.05 -0.14 8.14 -2.39 -0.02 -0.16 16 36 H 0.05 -0.13 8.14 -2.39 -0.02 -0.15 16 37 H 0.06 -0.29 6.43 -2.38 -0.02 -0.31 16 38 H 0.07 -0.30 6.43 -2.39 -0.02 -0.32 16 39 H 0.07 -0.47 8.14 -2.39 -0.02 -0.49 16 40 H 0.06 0.02 8.10 -2.39 -0.02 0.00 16 41 H 0.07 -0.08 8.10 -2.39 -0.02 -0.09 16 42 H 0.10 -0.28 8.13 -2.39 -0.02 -0.30 16 43 H 0.10 -0.40 8.13 -2.39 -0.02 -0.42 16 44 H 0.24 -2.73 4.64 -2.91 -0.01 -2.74 16 45 H 0.08 0.12 7.96 -2.39 -0.02 0.10 16 46 H 0.39 -1.09 8.74 -74.06 -0.65 -1.74 16 47 H -0.28 0.29 7.11 99.48 0.71 0.99 16 48 H -0.26 1.06 6.91 99.48 0.69 1.75 16 49 H 0.15 0.90 7.81 -2.91 -0.02 0.87 16 50 H 0.18 -0.86 6.96 -2.91 -0.02 -0.88 16 51 H 0.09 -0.63 8.11 -2.39 -0.02 -0.65 16 52 H 0.06 -0.23 8.14 -2.39 -0.02 -0.25 16 53 H 0.08 -0.59 8.14 -2.39 -0.02 -0.61 16 54 H 0.07 -0.48 6.43 -2.39 -0.02 -0.49 16 Total: 0.00 -21.63 449.42 3.65 -17.98 By element: Atomic # 1 Polarization: -8.31 SS G_CDS: 0.32 Total: -7.99 kcal Atomic # 6 Polarization: 5.24 SS G_CDS: 4.08 Total: 9.32 kcal Atomic # 8 Polarization: -13.54 SS G_CDS: -2.12 Total: -15.67 kcal Atomic # 14 Polarization: -4.99 SS G_CDS: 2.06 Total: -2.93 kcal Atomic # 35 Polarization: -0.03 SS G_CDS: -0.69 Total: -0.71 kcal Total: -21.63 3.65 -17.98 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_7763832_484008.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -123.835 kcal (2) G-P(sol) polarization free energy of solvation -21.631 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -145.466 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.648 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.983 kcal (6) G-S(sol) free energy of system = (1) + (5) -141.818 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.81 seconds