Wall clock time and date at job start Sat Mar 6 2021 11:50:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.53001 * 109.47310 * 2 1 4 4 C 1.53007 * 109.47349 * 240.00311 * 2 1 3 5 5 O 1.42897 * 109.47622 * 120.00439 * 2 1 3 6 6 C 1.42900 * 114.00042 * 59.99667 * 5 2 1 7 7 H 1.09001 * 112.85037 * 341.20107 * 6 5 2 8 8 C 1.53776 * 113.69040 * 112.46878 * 6 5 2 9 9 C 1.53779 * 87.08306 * 139.99525 * 8 6 5 10 10 H 1.08993 * 113.69500 * 89.12719 * 9 8 6 11 11 C 1.53008 * 113.61551 * 220.02218 * 9 8 6 12 12 O 1.45202 * 109.46568 * 272.49716 * 11 9 8 13 13 C 1.34759 * 116.99528 * 180.02562 * 12 11 9 14 14 O 1.21495 * 119.99825 * 359.97438 * 13 12 11 15 15 C 1.47509 * 119.99638 * 179.97438 * 13 12 11 16 16 C 1.38214 * 119.29380 * 180.08561 * 15 13 12 17 17 C 1.40603 * 119.34659 * 180.02562 * 16 15 13 18 18 N 1.32025 * 135.61709 * 179.89515 * 17 16 15 19 19 N 1.28495 * 110.77399 * 179.97438 * 18 17 16 20 20 C 1.34194 * 112.09193 * 359.97438 * 19 18 17 21 21 C 1.50704 * 126.54393 * 179.74097 * 20 19 18 22 22 O 1.42896 * 109.47303 * 105.02435 * 21 20 19 23 23 Si 1.86299 * 109.47307 * 345.02170 * 21 20 19 24 24 C 1.38137 * 106.91221 * 0.02562 * 20 19 18 25 25 C 1.40909 * 136.20232 * 179.97438 * 24 20 19 26 26 C 1.35359 * 119.76718 * 180.02562 * 25 24 20 27 27 C 1.53780 * 87.08094 * 334.56608 * 9 8 6 28 28 H 1.09001 * 109.46747 * 299.99325 * 1 2 3 29 29 H 1.08992 * 109.47253 * 59.99943 * 1 2 3 30 30 H 1.09000 * 109.47003 * 179.97438 * 1 2 3 31 31 H 1.08998 * 109.47191 * 179.97438 * 3 2 1 32 32 H 1.09004 * 109.47159 * 300.00638 * 3 2 1 33 33 H 1.09005 * 109.46957 * 59.99932 * 3 2 1 34 34 H 1.09001 * 109.47051 * 300.00322 * 4 2 1 35 35 H 1.09004 * 109.46723 * 59.99606 * 4 2 1 36 36 H 1.08993 * 109.47688 * 179.97438 * 4 2 1 37 37 H 1.08998 * 113.61633 * 25.44605 * 8 6 5 38 38 H 1.08999 * 113.61443 * 254.54125 * 8 6 5 39 39 H 1.08994 * 109.47247 * 152.49452 * 11 9 8 40 40 H 1.08998 * 109.46720 * 32.49400 * 11 9 8 41 41 H 1.07994 * 120.32689 * 359.94034 * 16 15 13 42 42 H 0.97001 * 123.95911 * 179.97438 * 19 18 17 43 43 H 1.09005 * 109.47111 * 225.02657 * 21 20 19 44 44 H 0.96698 * 114.00173 * 300.00551 * 22 21 20 45 45 H 1.48495 * 110.00295 * 179.97438 * 23 21 20 46 46 H 1.48505 * 110.00329 * 301.32525 * 23 21 20 47 47 H 1.08002 * 120.11664 * 0.04223 * 25 24 20 48 48 H 1.08000 * 119.24232 * 180.02562 * 26 25 24 49 49 H 1.08996 * 113.61872 * 139.97982 * 27 9 8 50 50 H 1.09007 * 113.61689 * 270.80409 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7212 -1.2493 5 8 2.0064 -0.6737 1.1667 6 6 1.5848 -2.0356 1.2644 7 1 0.7236 -2.2583 0.6343 8 6 2.7320 -3.0494 1.1204 9 6 2.0542 -3.8566 2.2402 10 1 1.3214 -4.5777 1.8783 11 6 3.0397 -4.4627 3.2415 12 8 3.4791 -5.7611 2.7626 13 6 4.3556 -6.4332 3.5346 14 8 4.7424 -5.9474 4.5789 15 6 4.8455 -7.7588 3.1116 16 6 5.7429 -8.4362 3.9154 17 6 6.2109 -9.6995 3.5131 18 7 7.0413 -10.5993 4.0069 19 7 7.1272 -11.6168 3.2270 20 6 6.3556 -11.4839 2.1371 21 6 6.2137 -12.4761 1.0117 22 8 4.9575 -13.1479 1.1244 23 14 7.5951 -13.7226 1.1048 24 6 5.7212 -10.2612 2.2406 25 6 4.8045 -9.5223 1.4665 26 6 4.3852 -8.3096 1.8974 27 6 1.4334 -2.5313 2.7122 28 1 -0.3633 0.5137 0.8901 29 1 -0.3633 0.5138 -0.8899 30 1 -0.3633 -1.0277 -0.0005 31 1 3.1300 1.4425 0.0005 32 1 1.6766 1.9564 -0.8900 33 1 1.6767 1.9563 0.8900 34 1 1.6767 -1.7489 -1.2494 35 1 1.6766 -0.2073 -2.1393 36 1 3.1300 -0.7208 -1.2496 37 1 3.7065 -2.6487 1.3995 38 1 2.7437 -3.5619 0.1585 39 1 2.5501 -4.5786 4.2084 40 1 3.9015 -3.8037 3.3473 41 1 6.0823 -7.9989 4.8427 42 1 7.6845 -12.3905 3.4050 43 1 6.2611 -11.9519 0.0571 44 1 4.8455 -13.6364 1.9513 45 1 7.4662 -14.7071 0.0006 46 1 8.9078 -13.0334 1.0208 47 1 4.4375 -9.9223 0.5329 48 1 3.6821 -7.7507 1.2976 49 1 0.3966 -2.6254 3.0353 50 1 2.0522 -1.9895 3.4276 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_7964246_14598394.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:50:19 Heat of formation + Delta-G solvation = -41.709123 kcal Electronic energy + Delta-G solvation = -31463.482254 eV Core-core repulsion = 27039.163366 eV Total energy + Delta-G solvation = -4424.318888 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 361.177 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -43.81200 -41.46770 -40.74544 -38.76237 -38.23112 -38.10928 -37.05918 -33.87773 -33.52418 -32.40884 -30.98920 -29.74274 -28.39519 -28.33130 -27.14758 -26.64108 -26.22785 -23.95807 -23.60438 -22.16169 -21.25951 -20.85241 -20.61923 -19.46459 -19.04860 -18.25626 -17.93280 -17.65172 -17.40725 -17.30313 -17.05494 -16.53957 -16.04323 -15.87324 -15.81256 -15.60479 -15.39153 -14.96010 -14.73692 -14.60126 -14.46802 -14.21380 -13.98466 -13.60391 -13.44996 -13.35144 -13.33074 -13.12082 -13.06808 -12.95299 -12.81055 -12.67423 -12.62827 -12.37416 -12.35156 -12.14596 -11.84003 -11.71130 -11.49476 -11.38317 -11.33609 -11.30065 -11.13603 -10.79525 -10.33187 -9.96189 -8.85461 -5.50331 -0.69630 0.17928 0.80570 1.23324 1.30943 1.46325 1.64265 1.65928 1.74158 2.72484 2.77237 3.00110 3.13377 3.24710 3.44253 3.55156 3.65609 3.77020 3.81966 3.87554 3.90868 3.95363 3.98398 4.08022 4.11216 4.14728 4.24706 4.26810 4.37624 4.43930 4.53132 4.56081 4.56838 4.65546 4.75839 4.76753 4.80742 4.82358 4.89391 4.90974 4.92112 5.00513 5.10096 5.13455 5.18228 5.27444 5.29871 5.31541 5.36792 5.41491 5.52649 5.67326 5.73137 6.23149 6.42942 6.70639 6.84296 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.104 3.896 3 C -0.139 4.139 4 C -0.176 4.176 5 O -0.361 6.361 6 C 0.062 3.938 7 H 0.093 0.907 8 C -0.149 4.149 9 C -0.111 4.111 10 H 0.106 0.894 11 C 0.081 3.919 12 O -0.348 6.348 13 C 0.511 3.489 14 O -0.504 6.504 15 C -0.101 4.101 16 C 0.007 3.993 17 C 0.045 3.955 18 N -0.268 5.268 19 N -0.325 5.325 20 C -0.016 4.016 21 C -0.030 4.030 22 O -0.529 6.529 23 Si 0.672 3.328 24 C -0.121 4.121 25 C -0.063 4.063 26 C -0.096 4.096 27 C -0.127 4.127 28 H 0.065 0.935 29 H 0.067 0.933 30 H 0.059 0.941 31 H 0.063 0.937 32 H 0.070 0.930 33 H 0.063 0.937 34 H 0.058 0.942 35 H 0.065 0.935 36 H 0.064 0.936 37 H 0.091 0.909 38 H 0.073 0.927 39 H 0.075 0.925 40 H 0.075 0.925 41 H 0.148 0.852 42 H 0.446 0.554 43 H 0.134 0.866 44 H 0.382 0.618 45 H -0.236 1.236 46 H -0.246 1.246 47 H 0.134 0.866 48 H 0.140 0.860 49 H 0.078 0.922 50 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.313 -3.908 -2.811 4.990 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.236 4.236 2 C 0.065 3.935 3 C -0.196 4.196 4 C -0.234 4.234 5 O -0.280 6.280 6 C 0.004 3.996 7 H 0.110 0.890 8 C -0.186 4.186 9 C -0.129 4.129 10 H 0.124 0.876 11 C 0.007 3.993 12 O -0.265 6.265 13 C 0.356 3.644 14 O -0.393 6.393 15 C -0.106 4.106 16 C -0.014 4.014 17 C -0.101 4.101 18 N -0.105 5.105 19 N -0.036 5.036 20 C -0.150 4.150 21 C -0.143 4.143 22 O -0.333 6.333 23 Si 0.571 3.429 24 C -0.130 4.130 25 C -0.083 4.083 26 C -0.116 4.116 27 C -0.164 4.164 28 H 0.084 0.916 29 H 0.086 0.914 30 H 0.078 0.922 31 H 0.082 0.918 32 H 0.089 0.911 33 H 0.082 0.918 34 H 0.077 0.923 35 H 0.084 0.916 36 H 0.083 0.917 37 H 0.110 0.890 38 H 0.092 0.908 39 H 0.093 0.907 40 H 0.094 0.906 41 H 0.166 0.834 42 H 0.293 0.707 43 H 0.151 0.849 44 H 0.229 0.771 45 H -0.160 1.160 46 H -0.170 1.170 47 H 0.151 0.849 48 H 0.158 0.842 49 H 0.097 0.903 50 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges 0.212 -3.918 -2.426 4.613 hybrid contribution -0.548 0.195 -0.846 1.027 sum -0.336 -3.722 -3.272 4.967 Atomic orbital electron populations 1.22468 0.95645 1.02450 1.03065 1.21542 0.93104 0.93262 0.85557 1.21770 1.02031 0.93229 1.02591 1.22469 1.02322 1.00767 0.97796 1.88042 1.73736 1.23376 1.42860 1.23571 0.97043 0.81862 0.97135 0.88966 1.23633 0.99489 0.96491 0.99003 1.22360 0.98003 0.95893 0.96669 0.87602 1.23106 0.97821 0.80718 0.97645 1.86529 1.56965 1.32760 1.50245 1.21021 0.76417 0.85325 0.81630 1.90871 1.56003 1.68649 1.23802 1.18715 1.01637 0.92675 0.97596 1.20251 0.92732 0.89658 0.98737 1.20348 0.98861 0.96015 0.94856 1.73646 1.21595 0.96672 1.18563 1.43446 1.30972 1.15932 1.13290 1.21819 1.00162 0.99242 0.93820 1.24553 0.96366 0.96978 0.96379 1.86591 1.34709 1.68217 1.43782 0.95675 0.76146 0.80464 0.90654 1.19382 1.01973 0.94188 0.97430 1.20048 0.95569 0.93544 0.99126 1.20739 1.00157 0.95635 0.95041 1.23234 1.01889 0.94189 0.97137 0.91597 0.91379 0.92215 0.91762 0.91083 0.91763 0.92262 0.91569 0.91672 0.89047 0.90847 0.90678 0.90647 0.83405 0.70681 0.84931 0.77075 1.15953 1.16990 0.84866 0.84221 0.90326 0.88695 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.11 8.38 37.16 0.31 0.42 16 2 C 0.10 0.04 1.11 -90.62 -0.10 -0.07 16 3 C -0.14 0.01 8.84 37.16 0.33 0.33 16 4 C -0.18 0.07 8.38 37.16 0.31 0.39 16 5 O -0.36 -0.69 10.00 -35.23 -0.35 -1.04 16 6 C 0.06 0.00 2.82 -25.92 -0.07 -0.07 16 7 H 0.09 -0.09 5.54 -51.93 -0.29 -0.37 16 8 C -0.15 0.01 7.47 -25.92 -0.19 -0.18 16 9 C -0.11 0.06 4.02 -89.80 -0.36 -0.30 16 10 H 0.11 -0.13 8.14 -51.93 -0.42 -0.55 16 11 C 0.08 0.09 5.31 37.16 0.20 0.29 16 12 O -0.35 -0.82 9.37 -40.65 -0.38 -1.21 16 13 C 0.51 1.95 7.88 34.51 0.27 2.22 16 14 O -0.50 -3.17 16.04 -19.26 -0.31 -3.48 16 15 C -0.10 -0.27 5.86 -105.06 -0.62 -0.89 16 16 C 0.01 0.02 9.64 -38.70 -0.37 -0.35 16 17 C 0.05 0.13 7.53 -83.13 -0.63 -0.49 16 18 N -0.27 -0.57 12.20 33.22 0.41 -0.17 16 19 N -0.33 0.41 6.26 33.87 0.21 0.62 16 20 C -0.02 0.01 6.19 -81.59 -0.51 -0.49 16 21 C -0.03 0.08 3.02 36.01 0.11 0.19 16 22 O -0.53 1.12 12.88 -35.23 -0.45 0.67 16 23 Si 0.67 -2.74 31.14 -169.99 -5.29 -8.03 16 24 C -0.12 -0.20 6.38 -105.17 -0.67 -0.87 16 25 C -0.06 -0.05 10.05 -39.60 -0.40 -0.45 16 26 C -0.10 -0.11 9.47 -39.54 -0.37 -0.48 16 27 C -0.13 0.06 7.47 -25.92 -0.19 -0.13 16 28 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 29 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 30 H 0.06 -0.06 6.24 -51.93 -0.32 -0.38 16 31 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 32 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 33 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 34 H 0.06 -0.04 7.02 -51.93 -0.36 -0.40 16 35 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 36 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 37 H 0.09 0.08 7.90 -51.93 -0.41 -0.33 16 38 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 39 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 40 H 0.08 0.12 7.84 -51.93 -0.41 -0.29 16 41 H 0.15 0.42 7.57 -52.49 -0.40 0.02 16 42 H 0.45 -2.26 6.88 -190.42 -1.31 -3.57 16 43 H 0.13 -0.34 7.96 -51.93 -0.41 -0.76 16 44 H 0.38 -2.26 8.70 45.56 0.40 -1.86 16 45 H -0.24 0.18 7.11 56.52 0.40 0.58 16 46 H -0.25 0.37 7.11 56.52 0.40 0.77 16 47 H 0.13 -0.13 8.06 -52.49 -0.42 -0.55 16 48 H 0.14 -0.05 7.51 -52.49 -0.39 -0.45 16 49 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 50 H 0.09 0.01 8.10 -51.92 -0.42 -0.41 16 LS Contribution 410.81 15.07 6.19 6.19 Total: 0.00 -8.92 410.81 -11.54 -20.46 By element: Atomic # 1 Polarization: -4.46 SS G_CDS: -8.60 Total: -13.06 kcal Atomic # 6 Polarization: 2.01 SS G_CDS: -2.96 Total: -0.94 kcal Atomic # 7 Polarization: -0.17 SS G_CDS: 0.62 Total: 0.45 kcal Atomic # 8 Polarization: -3.56 SS G_CDS: -1.50 Total: -5.06 kcal Atomic # 14 Polarization: -2.74 SS G_CDS: -5.29 Total: -8.03 kcal Total LS contribution 6.19 Total: 6.19 kcal Total: -8.92 -11.54 -20.46 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_7964246_14598394.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.254 kcal (2) G-P(sol) polarization free energy of solvation -8.915 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.169 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.540 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.455 kcal (6) G-S(sol) free energy of system = (1) + (5) -41.709 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds