Wall clock time and date at job start Sat Mar 6 2021 09:21:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86297 * 109.47365 * 2 1 4 4 C 1.50697 * 109.47398 * 239.99424 * 2 1 3 5 5 C 1.38139 * 126.54846 * 285.00457 * 4 2 1 6 6 C 1.40914 * 136.19914 * 359.96801 * 5 4 2 7 7 C 1.35348 * 119.76293 * 179.97438 * 6 5 4 8 8 C 1.41043 * 121.52595 * 359.97438 * 7 6 5 9 9 C 1.47518 * 119.29608 * 179.97438 * 8 7 6 10 10 O 1.21504 * 119.99679 * 179.97438 * 9 8 7 11 11 O 1.34746 * 120.00337 * 359.97438 * 9 8 7 12 12 C 1.45203 * 117.00350 * 180.02562 * 11 9 8 13 13 C 1.52997 * 109.47234 * 180.02562 * 12 11 9 14 14 H 1.09002 * 109.47153 * 304.99718 * 13 12 11 15 15 C 1.53000 * 109.47060 * 65.00037 * 13 12 11 16 16 C 1.53001 * 109.46886 * 180.02562 * 15 13 12 17 17 C 1.53002 * 109.46963 * 299.99499 * 16 15 13 18 18 H 1.09002 * 109.47067 * 300.00341 * 17 16 15 19 19 O 1.42900 * 109.47442 * 180.02562 * 17 16 15 20 20 C 1.52997 * 109.47092 * 60.00194 * 17 16 15 21 21 C 1.53002 * 109.46817 * 184.99949 * 13 12 11 22 22 C 1.38214 * 121.40523 * 0.25152 * 8 7 6 23 23 C 1.40596 * 119.34684 * 359.50298 * 22 8 7 24 24 N 1.32027 * 135.62330 * 180.15242 * 23 22 8 25 25 N 1.28485 * 110.77928 * 180.30755 * 24 23 22 26 26 H 0.96696 * 114.00248 * 300.00708 * 1 2 3 27 27 H 1.09001 * 109.46478 * 119.99640 * 2 1 3 28 28 H 1.48499 * 109.99983 * 299.99794 * 3 2 1 29 29 H 1.48504 * 110.00267 * 61.31475 * 3 2 1 30 30 H 1.08001 * 120.11539 * 359.97284 * 6 5 4 31 31 H 1.08000 * 119.23929 * 180.02562 * 7 6 5 32 32 H 1.09001 * 109.46958 * 59.99413 * 12 11 9 33 33 H 1.09004 * 109.46701 * 300.00089 * 12 11 9 34 34 H 1.09001 * 109.47194 * 299.99650 * 15 13 12 35 35 H 1.08992 * 109.47399 * 59.99823 * 15 13 12 36 36 H 1.09000 * 109.47437 * 180.02562 * 16 15 13 37 37 H 1.09002 * 109.47508 * 59.99571 * 16 15 13 38 38 H 0.96697 * 113.99983 * 59.99480 * 19 17 16 39 39 H 1.09001 * 109.47375 * 180.02562 * 20 17 16 40 40 H 1.09002 * 109.47497 * 59.99850 * 20 17 16 41 41 H 1.09002 * 109.47075 * 299.99262 * 21 13 12 42 42 H 1.08996 * 109.47407 * 60.00219 * 21 13 12 43 43 H 1.08003 * 120.32222 * 179.72399 * 22 8 7 44 44 H 0.97003 * 123.95708 * 179.97438 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2303 5 6 1.9348 -2.0745 -1.4489 6 6 1.5348 -3.2202 -0.7327 7 6 1.6955 -4.4465 -1.2826 8 6 2.2574 -4.6114 -2.5657 9 6 2.4103 -5.9709 -3.1175 10 8 2.8923 -6.1277 -4.2218 11 8 2.0155 -7.0389 -2.3969 12 6 2.1966 -8.3462 -3.0024 13 6 1.6936 -9.4266 -2.0430 14 1 2.1946 -9.3201 -1.0809 15 6 0.1832 -9.2752 -1.8511 16 6 -0.3197 -10.3553 -0.8913 17 6 -0.0157 -11.7370 -1.4739 18 1 -0.5168 -11.8439 -2.4360 19 8 -0.4859 -12.7459 -0.5778 20 6 1.4946 -11.8885 -1.6659 21 6 1.9976 -10.8081 -2.6262 22 6 2.6729 -3.5267 -3.3148 23 6 2.5234 -2.2302 -2.7919 24 7 2.7945 -1.0073 -3.2092 25 7 2.4592 -0.1388 -2.3237 26 1 -0.3933 0.4418 0.7649 27 1 1.7923 -0.5138 0.8901 28 1 1.5617 2.4678 -1.2085 29 1 1.5879 2.4586 1.2242 30 1 1.1015 -3.1202 0.2516 31 1 1.3856 -5.3188 -0.7264 32 1 3.2546 -8.5073 -3.2093 33 1 1.6325 -8.3965 -3.9337 34 1 -0.0334 -8.2910 -1.4356 35 1 -0.3178 -9.3817 -2.8132 36 1 -1.3958 -10.2478 -0.7548 37 1 0.1814 -10.2484 0.0708 38 1 -1.4375 -12.7102 -0.4096 39 1 1.7112 -12.8726 -2.0814 40 1 1.9958 -11.7815 -0.7039 41 1 1.4965 -10.9146 -3.5883 42 1 3.0736 -10.9160 -2.7630 43 1 3.1050 -3.6735 -4.2938 44 1 2.5745 0.8182 -2.4325 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_7964246_16737258.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 09:21:03 Heat of formation + Delta-G solvation = -78.805330 kcal Electronic energy + Delta-G solvation = -27855.208791 eV Core-core repulsion = 23740.356528 eV Total energy + Delta-G solvation = -4114.852262 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.145 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -43.77528 -41.43235 -40.07865 -38.51357 -38.21450 -37.49631 -36.47980 -33.60762 -32.52269 -31.85846 -31.70567 -31.03618 -27.51135 -26.86388 -25.67323 -23.90579 -23.80369 -22.50376 -21.95780 -21.13877 -20.90400 -19.38240 -18.99265 -18.71748 -18.19756 -17.76475 -17.66185 -17.37053 -16.68199 -16.48798 -16.11993 -15.93569 -15.52946 -15.40073 -15.30004 -15.00574 -14.80652 -14.37728 -14.25090 -14.01472 -13.72661 -13.60792 -13.25149 -13.14355 -13.03560 -12.97076 -12.80890 -12.51665 -12.36826 -12.16323 -11.86359 -11.69865 -11.53646 -11.49190 -11.37748 -11.30042 -11.12359 -10.80102 -10.71853 -9.93864 -8.83201 -5.36303 -0.67614 0.19061 0.79552 1.15326 1.29398 1.43960 1.58078 1.65708 1.75190 2.76313 2.94374 3.09640 3.16121 3.38901 3.55994 3.60872 3.72152 3.80031 3.82479 3.93742 4.05616 4.12978 4.14499 4.24827 4.25480 4.32809 4.34505 4.43295 4.44548 4.47478 4.48676 4.63756 4.76724 4.91321 4.92634 5.02609 5.04980 5.12222 5.13201 5.17936 5.27312 5.30288 5.36889 5.42394 5.52649 5.68954 5.74540 6.12971 6.71012 6.73923 6.83697 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.042 4.042 3 Si 0.670 3.330 4 C 0.034 3.966 5 C -0.121 4.121 6 C -0.060 4.060 7 C -0.097 4.097 8 C -0.102 4.102 9 C 0.512 3.488 10 O -0.505 6.505 11 O -0.348 6.348 12 C 0.072 3.928 13 C -0.089 4.089 14 H 0.087 0.913 15 C -0.113 4.113 16 C -0.152 4.152 17 C 0.102 3.898 18 H 0.055 0.945 19 O -0.569 6.569 20 C -0.111 4.111 21 C -0.111 4.111 22 C 0.008 3.992 23 C 0.046 3.954 24 N -0.267 5.267 25 N -0.326 5.326 26 H 0.387 0.613 27 H 0.097 0.903 28 H -0.247 1.247 29 H -0.241 1.241 30 H 0.132 0.868 31 H 0.140 0.860 32 H 0.074 0.926 33 H 0.073 0.927 34 H 0.075 0.925 35 H 0.064 0.936 36 H 0.066 0.934 37 H 0.072 0.928 38 H 0.379 0.621 39 H 0.073 0.927 40 H 0.072 0.928 41 H 0.070 0.930 42 H 0.075 0.925 43 H 0.148 0.852 44 H 0.446 0.554 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.343 3.131 5.034 5.938 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.338 6.338 2 C -0.153 4.153 3 Si 0.569 3.431 4 C -0.100 4.100 5 C -0.129 4.129 6 C -0.080 4.080 7 C -0.117 4.117 8 C -0.107 4.107 9 C 0.357 3.643 10 O -0.394 6.394 11 O -0.265 6.265 12 C -0.002 4.002 13 C -0.107 4.107 14 H 0.105 0.895 15 C -0.150 4.150 16 C -0.189 4.189 17 C 0.043 3.957 18 H 0.073 0.927 19 O -0.375 6.375 20 C -0.148 4.148 21 C -0.148 4.148 22 C -0.012 4.012 23 C -0.100 4.100 24 N -0.104 5.104 25 N -0.036 5.036 26 H 0.236 0.764 27 H 0.115 0.885 28 H -0.171 1.171 29 H -0.164 1.164 30 H 0.150 0.850 31 H 0.157 0.843 32 H 0.093 0.907 33 H 0.091 0.909 34 H 0.094 0.906 35 H 0.083 0.917 36 H 0.085 0.915 37 H 0.091 0.909 38 H 0.226 0.774 39 H 0.092 0.908 40 H 0.091 0.909 41 H 0.088 0.912 42 H 0.094 0.906 43 H 0.166 0.834 44 H 0.293 0.707 Dipole moment (debyes) X Y Z Total from point charges 0.764 4.000 3.207 5.183 hybrid contribution -1.980 0.163 0.961 2.207 sum -1.216 4.163 4.167 6.015 Atomic orbital electron populations 1.86629 1.16810 1.80173 1.50173 1.24055 0.85151 1.10662 0.95463 0.95367 0.91232 0.73887 0.82662 1.20360 1.05541 0.92347 0.91762 1.19341 1.05080 0.92201 0.96321 1.20005 0.98888 0.89703 0.99450 1.20713 0.99021 0.98016 0.93918 1.18695 1.06275 0.89223 0.96520 1.21022 0.74691 0.85551 0.83058 1.90873 1.41273 1.86851 1.20363 1.86512 1.76405 1.15597 1.47947 1.23185 1.01995 0.78480 0.96530 1.21269 0.97061 0.92800 0.99583 0.89510 1.21536 0.94337 0.99298 0.99837 1.22276 1.01476 0.95099 1.00087 1.21856 0.95357 0.86562 0.91886 0.92729 1.86517 1.28675 1.54530 1.67805 1.21448 0.93754 0.99175 1.00460 1.21489 1.01901 0.92474 0.98968 1.20244 0.94688 0.87057 0.99257 1.20321 1.03550 0.91963 0.94183 1.73656 1.23113 0.98402 1.15192 1.43463 1.40076 1.10488 1.09594 0.76387 0.88494 1.17141 1.16392 0.84980 0.84256 0.90749 0.90863 0.90609 0.91706 0.91533 0.90888 0.77410 0.90823 0.90902 0.91177 0.90635 0.83394 0.70678 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.65 12.86 -35.23 -0.45 0.20 16 2 C -0.04 0.11 3.02 36.00 0.11 0.22 16 3 Si 0.67 -2.66 31.14 -169.99 -5.29 -7.95 16 4 C 0.03 0.01 6.22 -81.60 -0.51 -0.50 16 5 C -0.12 -0.25 6.38 -105.16 -0.67 -0.92 16 6 C -0.06 -0.04 10.05 -39.60 -0.40 -0.44 16 7 C -0.10 -0.09 9.46 -39.55 -0.37 -0.46 16 8 C -0.10 -0.26 5.86 -105.06 -0.62 -0.88 16 9 C 0.51 1.76 7.88 34.51 0.27 2.03 16 10 O -0.50 -3.00 16.04 -19.27 -0.31 -3.31 16 11 O -0.35 -0.63 8.92 -40.62 -0.36 -0.99 16 12 C 0.07 0.03 4.85 37.16 0.18 0.21 16 13 C -0.09 0.09 2.43 -90.62 -0.22 -0.13 16 14 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 15 C -0.11 0.12 5.10 -26.73 -0.14 -0.02 16 16 C -0.15 0.16 5.55 -26.73 -0.15 0.01 16 17 C 0.10 -0.02 3.47 -26.73 -0.09 -0.11 16 18 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 19 O -0.57 -0.61 13.32 -35.23 -0.47 -1.08 16 20 C -0.11 0.03 5.58 -26.71 -0.15 -0.12 16 21 C -0.11 0.15 5.21 -26.70 -0.14 0.02 16 22 C 0.01 0.03 9.64 -38.70 -0.37 -0.35 16 23 C 0.05 0.15 7.53 -83.14 -0.63 -0.47 16 24 N -0.27 -0.80 12.20 33.21 0.41 -0.39 16 25 N -0.33 -0.08 6.26 33.86 0.21 0.13 16 26 H 0.39 -2.13 8.74 45.56 0.40 -1.73 16 27 H 0.10 -0.44 7.96 -51.93 -0.41 -0.85 16 28 H -0.25 0.40 7.10 56.52 0.40 0.80 16 29 H -0.24 0.48 7.11 56.52 0.40 0.88 16 30 H 0.13 -0.20 8.06 -52.49 -0.42 -0.62 16 31 H 0.14 -0.10 7.51 -52.49 -0.39 -0.50 16 32 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 33 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 34 H 0.08 -0.05 7.82 -51.93 -0.41 -0.45 16 35 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 36 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 37 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 38 H 0.38 -1.04 9.08 45.56 0.41 -0.63 16 39 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 40 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 41 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 42 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 43 H 0.15 0.42 7.57 -52.48 -0.40 0.02 16 44 H 0.45 -1.24 6.87 -190.43 -1.31 -2.55 16 LS Contribution 366.34 15.07 5.52 5.52 Total: 0.00 -9.52 366.34 -11.02 -20.54 By element: Atomic # 1 Polarization: -4.37 SS G_CDS: -6.38 Total: -10.75 kcal Atomic # 6 Polarization: 1.97 SS G_CDS: -3.89 Total: -1.92 kcal Atomic # 7 Polarization: -0.88 SS G_CDS: 0.62 Total: -0.26 kcal Atomic # 8 Polarization: -3.58 SS G_CDS: -1.59 Total: -5.17 kcal Atomic # 14 Polarization: -2.66 SS G_CDS: -5.29 Total: -7.95 kcal Total LS contribution 5.52 Total: 5.52 kcal Total: -9.52 -11.02 -20.54 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_7964246_16737258.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.267 kcal (2) G-P(sol) polarization free energy of solvation -9.520 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.786 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.019 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.539 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.805 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds