Wall clock time and date at job start Sat Mar 6 2021 11:27:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86301 * 1 3 3 C 1.86294 * 109.47161 * 2 1 4 4 C 1.86297 * 109.47104 * 240.00050 * 2 1 3 5 5 C 1.86302 * 109.47008 * 120.00115 * 2 1 3 6 6 O 1.45196 * 109.46909 * 59.99997 * 5 2 1 7 7 C 1.34748 * 117.00112 * 75.00325 * 6 5 2 8 8 O 1.21506 * 120.00259 * 359.97438 * 7 6 5 9 9 C 1.47523 * 119.99920 * 179.97438 * 7 6 5 10 10 C 1.38208 * 119.29395 * 180.02562 * 9 7 6 11 11 C 1.40602 * 119.34714 * 179.97438 * 10 9 7 12 12 N 1.32025 * 135.61918 * 180.02562 * 11 10 9 13 13 N 1.28494 * 110.77220 * 179.97438 * 12 11 10 14 14 C 1.34186 * 112.09600 * 359.97438 * 13 12 11 15 15 C 1.50703 * 126.54825 * 179.97438 * 14 13 12 16 16 O 1.42901 * 109.47617 * 255.02891 * 15 14 13 17 17 Si 1.86310 * 109.46700 * 15.02835 * 15 14 13 18 18 H 1.48500 * 109.47325 * 59.99926 * 17 15 14 19 19 H 1.48501 * 109.46741 * 179.97438 * 17 15 14 20 20 H 1.48500 * 109.46745 * 299.99559 * 17 15 14 21 21 C 1.38140 * 106.91153 * 0.02562 * 14 13 12 22 22 C 1.40910 * 136.20406 * 180.02562 * 21 14 13 23 23 C 1.35354 * 119.76388 * 179.97438 * 22 21 14 24 24 H 1.09000 * 109.47074 * 300.00439 * 1 2 3 25 25 H 1.09004 * 109.47079 * 59.99788 * 1 2 3 26 26 H 1.09000 * 109.47593 * 179.97438 * 1 2 3 27 27 H 1.09002 * 109.47186 * 179.97438 * 3 2 1 28 28 H 1.08995 * 109.47462 * 299.99931 * 3 2 1 29 29 H 1.09003 * 109.47436 * 60.00352 * 3 2 1 30 30 H 1.09004 * 109.47392 * 300.00315 * 4 2 1 31 31 H 1.09004 * 109.47020 * 60.00126 * 4 2 1 32 32 H 1.09001 * 109.47646 * 179.97438 * 4 2 1 33 33 H 1.09001 * 109.46964 * 300.00153 * 5 2 1 34 34 H 1.08996 * 109.46765 * 180.02562 * 5 2 1 35 35 H 1.08002 * 120.33229 * 359.95625 * 10 9 7 36 36 H 0.97004 * 123.95270 * 179.72738 * 13 12 11 37 37 H 1.09002 * 109.47449 * 135.01900 * 15 14 13 38 38 H 0.96693 * 113.99794 * 59.99427 * 16 15 14 39 39 H 1.08006 * 120.11785 * 0.02562 * 22 21 14 40 40 H 1.08005 * 119.23443 * 180.02562 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7564 0.0000 4 6 2.4840 -0.8782 -1.5211 5 6 2.4840 -0.8783 1.5211 6 8 1.9999 -2.2472 1.5211 7 6 2.5965 -3.1069 0.6721 8 8 3.4962 -2.7232 -0.0487 9 6 2.1572 -4.5142 0.6179 10 6 2.7795 -5.3836 -0.2579 11 6 2.3621 -6.7252 -0.3101 12 7 2.7134 -7.7967 -0.9968 13 7 1.9984 -8.8094 -0.6587 14 6 1.1016 -8.4998 0.2903 15 6 0.1029 -9.4358 0.9208 16 8 -1.1994 -9.1652 0.3984 17 14 0.5731 -11.1969 0.5353 18 1 1.9264 -11.4782 1.0781 19 1 -0.4107 -12.1192 1.1571 20 1 0.5785 -11.3969 -0.9362 21 6 1.2679 -7.1590 0.5782 22 6 0.6737 -6.2245 1.4495 23 6 1.1117 -4.9439 1.4614 24 1 -0.3633 0.5139 0.8899 25 1 -0.3633 0.5139 -0.8900 26 1 -0.3634 -1.0276 -0.0005 27 1 3.5740 1.7564 0.0005 28 1 2.1207 2.2703 -0.8899 29 1 2.1207 2.2703 0.8900 30 1 2.1206 -1.9059 -1.5212 31 1 2.1206 -0.3643 -2.4111 32 1 3.5740 -0.8779 -1.5214 33 1 2.1206 -0.3644 2.4111 34 1 3.5739 -0.8779 1.5213 35 1 3.5784 -5.0359 -0.8961 36 1 2.0932 -9.6933 -1.0468 37 1 0.0989 -9.2891 2.0009 38 1 -1.2697 -9.2761 -0.5595 39 1 -0.1279 -6.5293 2.1061 40 1 0.6504 -4.2349 2.1330 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_7964246_4858416.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:27:26 Heat of formation + Delta-G solvation = -51.554716 kcal Electronic energy + Delta-G solvation = -23023.650260 eV Core-core repulsion = 19543.294141 eV Total energy + Delta-G solvation = -3480.356119 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 308.115 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -43.81325 -41.34011 -38.49950 -38.13325 -37.15241 -33.51666 -32.40946 -30.97711 -29.66689 -28.46082 -28.33728 -28.25827 -27.02532 -25.76708 -23.88594 -22.09881 -21.24771 -19.55059 -19.05941 -18.29551 -17.75623 -17.50484 -17.26644 -17.09233 -16.22318 -15.85905 -15.39819 -15.15013 -15.00435 -14.55234 -14.45603 -14.09099 -13.94873 -13.75543 -13.58464 -13.38162 -13.31550 -13.21497 -13.14209 -12.99149 -12.87860 -12.70714 -12.51654 -12.36551 -12.25198 -11.49267 -11.39752 -11.32052 -10.85943 -10.77473 -10.70311 -10.32869 -9.93746 -8.84065 -0.68253 0.19747 0.68836 0.99186 1.12462 1.31330 1.42372 1.50115 1.57402 1.67090 1.72884 1.90490 2.09183 2.58924 2.79752 3.00995 3.17188 3.26237 3.76538 3.91377 3.99549 4.14391 4.26471 4.30746 4.44766 4.50048 4.69382 4.71001 4.73330 4.79584 4.81758 4.92817 4.96438 5.02017 5.16937 5.29472 5.40013 5.46527 5.52023 5.56492 5.67026 5.73631 5.81033 6.21300 6.70711 6.89154 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.446 4.446 2 Si 0.999 3.001 3 C -0.447 4.447 4 C -0.437 4.437 5 C -0.238 4.238 6 O -0.330 6.330 7 C 0.494 3.506 8 O -0.490 6.490 9 C -0.098 4.098 10 C 0.004 3.996 11 C 0.046 3.954 12 N -0.270 5.270 13 N -0.334 5.334 14 C -0.017 4.017 15 C -0.045 4.045 16 O -0.527 6.527 17 Si 0.922 3.078 18 H -0.240 1.240 19 H -0.228 1.228 20 H -0.246 1.246 21 C -0.119 4.119 22 C -0.061 4.061 23 C -0.099 4.099 24 H 0.070 0.930 25 H 0.070 0.930 26 H 0.071 0.929 27 H 0.071 0.929 28 H 0.074 0.926 29 H 0.070 0.930 30 H 0.066 0.934 31 H 0.061 0.939 32 H 0.077 0.923 33 H 0.110 0.890 34 H 0.081 0.919 35 H 0.148 0.852 36 H 0.444 0.556 37 H 0.137 0.863 38 H 0.378 0.622 39 H 0.136 0.864 40 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.699 -2.706 1.351 4.054 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.554 4.554 2 Si 1.194 2.806 3 C -0.555 4.555 4 C -0.545 4.545 5 C -0.357 4.357 6 O -0.245 6.245 7 C 0.339 3.661 8 O -0.379 6.379 9 C -0.104 4.104 10 C -0.017 4.017 11 C -0.100 4.100 12 N -0.107 5.107 13 N -0.044 5.044 14 C -0.151 4.151 15 C -0.158 4.158 16 O -0.331 6.331 17 Si 0.742 3.258 18 H -0.163 1.163 19 H -0.150 1.150 20 H -0.170 1.170 21 C -0.128 4.128 22 C -0.081 4.081 23 C -0.119 4.119 24 H 0.089 0.911 25 H 0.090 0.910 26 H 0.090 0.910 27 H 0.090 0.910 28 H 0.093 0.907 29 H 0.089 0.911 30 H 0.085 0.915 31 H 0.080 0.920 32 H 0.096 0.904 33 H 0.128 0.872 34 H 0.099 0.901 35 H 0.166 0.834 36 H 0.290 0.710 37 H 0.154 0.846 38 H 0.226 0.774 39 H 0.153 0.847 40 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -1.549 -3.675 0.793 4.066 hybrid contribution -0.218 0.232 -0.060 0.324 sum -1.767 -3.443 0.733 3.939 Atomic orbital electron populations 1.26060 1.20033 1.04762 1.04519 0.79707 0.67713 0.67028 0.66106 1.26046 1.06490 1.18133 1.04794 1.26247 1.07038 1.07348 1.13841 1.28351 1.05331 0.83888 1.18084 1.86471 1.58889 1.21132 1.58052 1.21073 0.80442 0.86717 0.77849 1.90855 1.28669 1.78061 1.40285 1.18723 1.00390 0.90094 1.01189 1.20240 0.97561 0.88062 0.95798 1.20369 0.98120 0.93737 0.97762 1.73643 1.18629 0.94513 1.23870 1.43500 1.22900 1.11564 1.26450 1.21871 0.98635 0.96613 0.97954 1.24495 0.82922 1.06000 1.02336 1.86606 1.26609 1.92459 1.27422 0.86060 0.82581 0.75398 0.81790 1.16328 1.15021 1.16964 1.19368 0.99739 0.92340 1.01320 1.20067 0.99125 0.91525 0.97348 1.20770 0.95985 0.96347 0.98766 0.91089 0.91041 0.90969 0.90984 0.90692 0.91075 0.91477 0.91962 0.90413 0.87169 0.90064 0.83403 0.70967 0.84588 0.77422 0.84650 0.84142 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.23 8.65 101.05 0.87 1.10 16 2 Si 1.00 -0.98 12.12 -169.99 -2.06 -3.04 16 3 C -0.45 0.44 8.65 101.05 0.87 1.32 16 4 C -0.44 -0.69 7.10 101.05 0.72 0.02 16 5 C -0.24 -0.01 5.40 101.05 0.55 0.54 16 6 O -0.33 -0.62 9.07 -40.62 -0.37 -0.98 16 7 C 0.49 1.51 6.65 34.52 0.23 1.74 16 8 O -0.49 -2.24 11.96 -19.27 -0.23 -2.47 16 9 C -0.10 -0.24 5.86 -105.06 -0.62 -0.85 16 10 C 0.00 0.01 9.64 -38.70 -0.37 -0.36 16 11 C 0.05 0.14 7.53 -83.14 -0.63 -0.49 16 12 N -0.27 -0.69 12.20 33.22 0.41 -0.29 16 13 N -0.33 0.16 6.26 33.86 0.21 0.37 16 14 C -0.02 0.01 6.19 -81.60 -0.51 -0.50 16 15 C -0.05 0.13 3.03 36.01 0.11 0.24 16 16 O -0.53 1.12 12.88 -35.23 -0.45 0.67 16 17 Si 0.92 -3.48 26.43 -169.99 -4.49 -7.98 16 18 H -0.24 0.68 7.11 56.52 0.40 1.09 16 19 H -0.23 0.52 7.11 56.52 0.40 0.92 16 20 H -0.25 1.07 7.09 56.52 0.40 1.47 16 21 C -0.12 -0.18 6.38 -105.16 -0.67 -0.85 16 22 C -0.06 -0.03 10.05 -39.60 -0.40 -0.43 16 23 C -0.10 -0.09 9.46 -39.55 -0.37 -0.47 16 24 H 0.07 -0.07 7.96 -51.93 -0.41 -0.49 16 25 H 0.07 -0.04 7.96 -51.93 -0.41 -0.46 16 26 H 0.07 0.01 7.96 -51.93 -0.41 -0.41 16 27 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 28 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 29 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 30 H 0.07 0.19 6.28 -51.93 -0.33 -0.13 16 31 H 0.06 0.06 7.96 -51.93 -0.41 -0.35 16 32 H 0.08 0.20 7.42 -51.93 -0.39 -0.18 16 33 H 0.11 -0.22 7.96 -51.93 -0.41 -0.63 16 34 H 0.08 0.04 7.52 -51.93 -0.39 -0.35 16 35 H 0.15 0.38 7.57 -52.49 -0.40 -0.02 16 36 H 0.44 -1.57 6.87 -190.42 -1.31 -2.88 16 37 H 0.14 -0.54 7.96 -51.93 -0.41 -0.95 16 38 H 0.38 -1.98 8.70 45.56 0.40 -1.58 16 39 H 0.14 -0.20 8.06 -52.48 -0.42 -0.62 16 40 H 0.14 -0.08 7.51 -52.48 -0.39 -0.48 16 LS Contribution 338.42 15.07 5.10 5.10 Total: 0.00 -7.30 338.42 -7.85 -15.15 By element: Atomic # 1 Polarization: -1.80 SS G_CDS: -5.75 Total: -7.54 kcal Atomic # 6 Polarization: 1.22 SS G_CDS: -0.21 Total: 1.01 kcal Atomic # 7 Polarization: -0.53 SS G_CDS: 0.62 Total: 0.09 kcal Atomic # 8 Polarization: -1.73 SS G_CDS: -1.05 Total: -2.78 kcal Atomic # 14 Polarization: -4.47 SS G_CDS: -6.55 Total: -11.02 kcal Total LS contribution 5.10 Total: 5.10 kcal Total: -7.30 -7.85 -15.15 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_7964246_4858416.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -36.407 kcal (2) G-P(sol) polarization free energy of solvation -7.299 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -43.707 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.848 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.147 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.555 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds