Wall clock time and date at job start Sat Mar 6 2021 09:09:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53002 * 109.47156 * 2 1 4 4 C 1.53004 * 109.47143 * 240.00151 * 2 1 3 5 5 O 1.42901 * 109.47358 * 120.00181 * 2 1 3 6 6 C 1.42895 * 113.99722 * 59.99693 * 5 2 1 7 7 H 1.09000 * 112.85317 * 18.80778 * 6 5 2 8 8 C 1.53777 * 113.61426 * 150.00567 * 6 5 2 9 9 C 1.53777 * 87.08428 * 139.98183 * 8 6 5 10 10 H 1.08998 * 113.61629 * 89.20128 * 9 8 6 11 11 C 1.53002 * 113.61266 * 220.01838 * 9 8 6 12 12 O 1.45205 * 109.47099 * 185.00015 * 11 9 8 13 13 C 1.34709 * 117.00180 * 180.02562 * 12 11 9 14 14 O 1.21471 * 119.99743 * 0.02562 * 13 12 11 15 15 C 1.47723 * 120.00179 * 179.97438 * 13 12 11 16 16 C 1.39599 * 120.14474 * 180.02562 * 15 13 12 17 17 C 1.38086 * 119.83190 * 180.30643 * 16 15 13 18 18 Cl 1.73599 * 119.93503 * 179.70043 * 17 16 15 19 19 C 1.38460 * 120.12413 * 359.46365 * 17 16 15 20 20 C 1.50699 * 119.85507 * 180.26303 * 19 17 16 21 21 O 1.42892 * 109.47059 * 195.25244 * 20 19 17 22 22 Si 1.86301 * 109.47106 * 315.25509 * 20 19 17 23 23 C 1.38371 * 120.28831 * 0.51592 * 19 17 16 24 24 C 1.37924 * 120.16446 * 359.76476 * 23 19 17 25 25 C 1.53774 * 87.08164 * 334.56644 * 9 8 6 26 26 H 1.08997 * 109.47313 * 300.00095 * 1 2 3 27 27 H 1.09003 * 109.47243 * 59.99714 * 1 2 3 28 28 H 1.08996 * 109.47101 * 179.97438 * 1 2 3 29 29 H 1.08996 * 109.47280 * 180.02562 * 3 2 1 30 30 H 1.09003 * 109.47278 * 300.00264 * 3 2 1 31 31 H 1.09001 * 109.47291 * 60.00246 * 3 2 1 32 32 H 1.09002 * 109.46881 * 300.00010 * 4 2 1 33 33 H 1.09003 * 109.46941 * 59.99950 * 4 2 1 34 34 H 1.08996 * 109.47129 * 179.97438 * 4 2 1 35 35 H 1.09001 * 113.61417 * 25.42737 * 8 6 5 36 36 H 1.09000 * 113.61373 * 254.52913 * 8 6 5 37 37 H 1.09003 * 109.47372 * 65.00116 * 11 9 8 38 38 H 1.09004 * 109.47175 * 304.99979 * 11 9 8 39 39 H 1.08002 * 120.07951 * 0.02562 * 16 15 13 40 40 H 1.09000 * 109.47073 * 75.25308 * 20 19 17 41 41 H 0.96698 * 114.00452 * 179.97438 * 21 20 19 42 42 H 1.48496 * 110.00021 * 178.68568 * 22 20 19 43 43 H 1.48511 * 109.99549 * 299.99946 * 22 20 19 44 44 H 1.07995 * 119.91727 * 179.74787 * 23 19 17 45 45 H 1.08000 * 120.06461 * 179.97438 * 24 23 19 46 46 H 1.09002 * 113.62068 * 139.97915 * 25 9 8 47 47 H 1.09004 * 113.61739 * 270.88912 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2493 5 8 2.0064 -0.6737 1.1667 6 6 1.5847 -2.0355 1.2644 7 1 1.2522 -2.4451 0.3106 8 6 2.5836 -2.9379 2.0078 9 6 1.3666 -3.6120 2.6630 10 1 0.9744 -4.4542 2.0930 11 6 1.5711 -3.9403 4.1433 12 8 0.4216 -4.6758 4.6393 13 6 0.4432 -5.0433 5.9351 14 8 1.3962 -4.7568 6.6317 15 6 -0.6923 -5.7938 6.5091 16 6 -0.6732 -6.1757 7.8517 17 6 -1.7354 -6.8826 8.3799 18 17 -1.7109 -7.3656 10.0472 19 6 -2.8219 -7.2025 7.5836 20 6 -3.9804 -7.9690 8.1679 21 8 -4.7930 -8.4831 7.1109 22 14 -3.3347 -9.3808 9.1978 23 6 -2.8464 -6.8261 6.2523 24 6 -1.7894 -6.1248 5.7109 25 6 0.6076 -2.2963 2.4230 26 1 -0.3634 0.5138 0.8899 27 1 -0.3634 0.5139 -0.8900 28 1 -0.3633 -1.0276 -0.0005 29 1 3.1300 1.4425 -0.0005 30 1 1.6766 1.9564 -0.8900 31 1 1.6767 1.9564 0.8900 32 1 1.6766 -1.7489 -1.2493 33 1 1.6766 -0.2073 -2.1393 34 1 3.1300 -0.7208 -1.2495 35 1 3.2171 -2.3998 2.7129 36 1 3.1476 -3.5993 1.3501 37 1 1.6820 -3.0150 4.7088 38 1 2.4689 -4.5473 4.2602 39 1 0.1722 -5.9229 8.4744 40 1 -4.5763 -7.3051 8.7943 41 1 -5.5592 -8.9891 7.4143 42 1 -4.4667 -10.1255 9.8055 43 1 -2.5205 -10.2932 8.3552 44 1 -3.6951 -7.0823 5.6356 45 1 -1.8100 -5.8321 4.6715 46 1 -0.4237 -2.4397 2.1005 47 1 0.7008 -1.5828 3.2417 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_8687484_14598394.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 09:09:45 Heat of formation + Delta-G solvation = -120.243722 kcal Electronic energy + Delta-G solvation = -28659.287607 eV Core-core repulsion = 24414.605133 eV Total energy + Delta-G solvation = -4244.682474 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 355.132 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -41.88710 -40.93722 -40.43168 -38.59436 -38.12898 -37.75503 -37.32857 -33.92055 -33.29751 -32.11421 -29.93344 -28.37781 -28.33905 -27.66879 -26.62813 -24.40000 -23.97238 -23.35496 -21.94449 -20.86735 -20.62985 -19.30975 -18.79999 -18.21151 -17.68628 -17.56449 -17.10151 -16.64664 -16.60864 -16.26945 -16.16008 -15.89739 -15.71771 -15.03262 -14.92938 -14.65305 -14.52940 -14.40332 -14.10403 -14.01851 -13.87833 -13.47078 -13.32742 -13.27184 -13.14966 -13.02341 -12.95441 -12.79108 -12.65464 -12.53141 -12.45148 -12.42082 -12.21329 -12.02951 -11.89637 -11.81308 -11.57362 -11.33881 -11.17546 -11.00656 -10.35417 -10.13508 -9.82989 -4.69771 -0.70339 -0.07082 0.64248 1.04561 1.32551 1.43795 1.48625 1.90104 2.41955 2.72588 2.90248 3.27996 3.46126 3.54159 3.56035 3.68652 3.76717 3.82537 3.90532 3.92596 3.98575 4.06245 4.09336 4.11375 4.13845 4.20192 4.33367 4.43029 4.50082 4.63257 4.64358 4.67893 4.76324 4.78308 4.78987 4.79513 4.85519 4.92170 4.94928 4.97734 5.01735 5.08420 5.12603 5.15481 5.22568 5.32870 5.34086 5.40427 5.42896 6.42934 6.51513 6.52596 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C 0.098 3.902 3 C -0.140 4.140 4 C -0.177 4.177 5 O -0.382 6.382 6 C 0.060 3.940 7 H 0.105 0.895 8 C -0.126 4.126 9 C -0.101 4.101 10 H 0.119 0.881 11 C 0.078 3.922 12 O -0.345 6.345 13 C 0.514 3.486 14 O -0.531 6.531 15 C -0.132 4.132 16 C -0.038 4.038 17 C -0.070 4.070 18 Cl 0.050 6.950 19 C -0.032 4.032 20 C -0.070 4.070 21 O -0.553 6.553 22 Si 0.633 3.367 23 C -0.103 4.103 24 C -0.041 4.041 25 C -0.148 4.148 26 H 0.056 0.944 27 H 0.075 0.925 28 H 0.062 0.938 29 H 0.057 0.943 30 H 0.084 0.916 31 H 0.056 0.944 32 H 0.065 0.935 33 H 0.076 0.924 34 H 0.058 0.942 35 H 0.085 0.915 36 H 0.090 0.910 37 H 0.069 0.931 38 H 0.076 0.924 39 H 0.157 0.843 40 H 0.114 0.886 41 H 0.401 0.599 42 H -0.259 1.259 43 H -0.297 1.297 44 H 0.159 0.841 45 H 0.165 0.835 46 H 0.080 0.920 47 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.097 1.029 -2.537 4.133 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.231 4.231 2 C 0.059 3.941 3 C -0.197 4.197 4 C -0.234 4.234 5 O -0.302 6.302 6 C 0.002 3.998 7 H 0.122 0.878 8 C -0.163 4.163 9 C -0.119 4.119 10 H 0.137 0.863 11 C 0.005 3.995 12 O -0.262 6.262 13 C 0.360 3.640 14 O -0.422 6.422 15 C -0.133 4.133 16 C -0.057 4.057 17 C -0.097 4.097 18 Cl 0.079 6.921 19 C -0.033 4.033 20 C -0.179 4.179 21 O -0.363 6.363 22 Si 0.536 3.464 23 C -0.121 4.121 24 C -0.059 4.059 25 C -0.186 4.186 26 H 0.075 0.925 27 H 0.094 0.906 28 H 0.082 0.918 29 H 0.076 0.924 30 H 0.102 0.898 31 H 0.075 0.925 32 H 0.084 0.916 33 H 0.095 0.905 34 H 0.077 0.923 35 H 0.104 0.896 36 H 0.108 0.892 37 H 0.087 0.913 38 H 0.094 0.906 39 H 0.175 0.825 40 H 0.132 0.868 41 H 0.252 0.748 42 H -0.185 1.185 43 H -0.223 1.223 44 H 0.176 0.824 45 H 0.183 0.817 46 H 0.098 0.902 47 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -2.225 0.626 -2.326 3.280 hybrid contribution -0.878 -0.407 -0.393 1.044 sum -3.103 0.218 -2.719 4.132 Atomic orbital electron populations 1.22438 0.94883 1.02803 1.02939 1.21680 0.93750 0.93322 0.85349 1.21798 1.01641 0.93377 1.02908 1.22449 1.01906 1.01200 0.97841 1.88019 1.74265 1.24193 1.43749 1.23679 0.95721 0.82314 0.98088 0.87785 1.23228 0.96339 0.97350 0.99432 1.22328 0.98668 0.98273 0.92637 0.86337 1.23242 0.86095 0.95484 0.94679 1.86506 1.46064 1.67596 1.25997 1.21174 0.85864 0.76400 0.80558 1.90857 1.35963 1.53804 1.61526 1.19011 0.95018 1.04863 0.94413 1.21114 0.97355 0.93332 0.93881 1.20423 0.96676 1.05249 0.87322 1.98280 1.95288 1.83330 1.15234 1.19673 0.93492 0.95509 0.94617 1.24648 0.94019 1.04188 0.95092 1.86372 1.42945 1.73913 1.33064 0.93425 0.85340 0.79129 0.88545 1.21120 0.99768 0.97367 0.93845 1.21823 0.90373 0.92564 1.01164 1.23604 0.99529 0.96185 0.99254 0.92506 0.90632 0.91850 0.92365 0.89753 0.92490 0.91645 0.90461 0.92256 0.89622 0.89174 0.91272 0.90612 0.82535 0.86826 0.74785 1.18453 1.22324 0.82365 0.81746 0.90158 0.90317 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 0.31 8.38 71.98 0.60 0.92 16 2 C 0.10 0.00 1.11 -10.79 -0.01 -0.01 16 3 C -0.14 0.04 8.84 71.98 0.64 0.68 16 4 C -0.18 0.40 8.38 71.98 0.60 1.00 16 5 O -0.38 -1.34 10.00 -148.98 -1.49 -2.83 16 6 C 0.06 -0.05 2.82 31.12 0.09 0.03 16 7 H 0.10 -0.36 5.54 -2.39 -0.01 -0.38 16 8 C -0.13 0.24 7.47 31.12 0.23 0.48 16 9 C -0.10 0.25 4.02 -10.27 -0.04 0.21 16 10 H 0.12 -0.55 8.14 -2.39 -0.02 -0.57 16 11 C 0.08 0.10 5.31 71.98 0.38 0.48 16 12 O -0.35 -1.04 9.47 -56.19 -0.53 -1.57 16 13 C 0.51 3.03 7.90 70.33 0.56 3.59 16 14 O -0.53 -6.02 16.14 19.93 0.32 -5.70 16 15 C -0.13 -0.36 5.87 -20.10 -0.12 -0.48 16 16 C -0.04 -0.07 9.38 22.56 0.21 0.14 16 17 C -0.07 -0.03 5.88 22.29 0.13 0.10 16 18 Cl 0.05 -0.12 23.22 -2.72 -0.06 -0.18 16 19 C -0.03 -0.03 5.17 -19.78 -0.10 -0.13 16 20 C -0.07 0.08 2.86 71.24 0.20 0.28 16 21 O -0.55 0.43 11.47 -148.98 -1.71 -1.28 16 22 Si 0.63 1.14 27.55 68.60 1.89 3.03 16 23 C -0.10 0.00 9.35 22.23 0.21 0.20 16 24 C -0.04 0.02 9.62 22.54 0.22 0.24 16 25 C -0.15 0.18 7.46 31.12 0.23 0.41 16 26 H 0.06 0.00 8.14 -2.39 -0.02 -0.02 16 27 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 28 H 0.06 -0.17 7.02 -2.39 -0.02 -0.19 16 29 H 0.06 0.04 8.14 -2.39 -0.02 0.03 16 30 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 31 H 0.06 0.06 8.14 -2.39 -0.02 0.04 16 32 H 0.06 -0.23 6.24 -2.39 -0.01 -0.24 16 33 H 0.08 -0.31 8.14 -2.39 -0.02 -0.33 16 34 H 0.06 -0.05 8.14 -2.39 -0.02 -0.07 16 35 H 0.09 0.01 8.10 -2.39 -0.02 -0.01 16 36 H 0.09 -0.37 8.14 -2.39 -0.02 -0.39 16 37 H 0.07 0.19 7.84 -2.39 -0.02 0.17 16 38 H 0.08 0.10 8.14 -2.39 -0.02 0.08 16 39 H 0.16 0.17 7.65 -2.91 -0.02 0.15 16 40 H 0.11 -0.62 7.96 -2.39 -0.02 -0.64 16 41 H 0.40 -3.19 8.74 -74.06 -0.65 -3.84 16 42 H -0.26 -1.21 7.11 99.48 0.71 -0.51 16 43 H -0.30 -3.11 7.11 99.48 0.71 -2.41 16 44 H 0.16 -0.23 7.12 -2.91 -0.02 -0.25 16 45 H 0.16 -0.72 7.61 -2.91 -0.02 -0.74 16 46 H 0.08 -0.21 8.14 -2.39 -0.02 -0.23 16 47 H 0.08 0.13 7.90 -2.39 -0.02 0.11 16 Total: 0.00 -14.03 393.16 2.82 -11.22 By element: Atomic # 1 Polarization: -11.20 SS G_CDS: 0.37 Total: -10.83 kcal Atomic # 6 Polarization: 4.11 SS G_CDS: 4.03 Total: 8.14 kcal Atomic # 8 Polarization: -7.97 SS G_CDS: -3.41 Total: -11.37 kcal Atomic # 14 Polarization: 1.14 SS G_CDS: 1.89 Total: 3.03 kcal Atomic # 17 Polarization: -0.12 SS G_CDS: -0.06 Total: -0.18 kcal Total: -14.03 2.82 -11.22 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_8687484_14598394.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -109.028 kcal (2) G-P(sol) polarization free energy of solvation -14.031 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -123.059 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.816 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -11.216 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.244 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds