Wall clock time and date at job start Sat Mar 6 2021 09:40:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53003 * 109.47149 * 2 1 4 4 C 1.53001 * 109.47348 * 240.00074 * 2 1 3 5 5 O 1.45198 * 109.47093 * 120.00025 * 2 1 3 6 6 C 1.34640 * 116.99807 * 60.00077 * 5 2 1 7 7 O 1.21509 * 119.99799 * 359.97438 * 6 5 2 8 8 N 1.34776 * 119.99612 * 180.02562 * 6 5 2 9 9 C 1.46506 * 119.99641 * 179.97438 * 8 6 5 10 10 H 1.08998 * 112.84938 * 23.80889 * 9 8 6 11 11 C 1.53787 * 113.61289 * 155.00110 * 9 8 6 12 12 C 1.53777 * 87.08074 * 89.20106 * 11 9 8 13 13 H 1.09004 * 113.61426 * 270.80391 * 12 11 9 14 14 C 1.53001 * 113.61533 * 139.98243 * 12 11 9 15 15 O 1.45202 * 109.47151 * 176.53189 * 14 12 11 16 16 C 1.34710 * 116.99623 * 180.02562 * 15 14 12 17 17 O 1.21473 * 120.00082 * 359.97438 * 16 15 14 18 18 C 1.47734 * 119.99759 * 180.27325 * 16 15 14 19 19 C 1.39594 * 120.14298 * 359.44491 * 18 16 15 20 20 C 1.38082 * 119.83279 * 179.74684 * 19 18 16 21 21 Cl 1.73601 * 119.94006 * 180.23544 * 20 19 18 22 22 C 1.38463 * 120.12242 * 0.50947 * 20 19 18 23 23 C 1.50697 * 119.85577 * 179.74878 * 22 20 19 24 24 O 1.42895 * 109.47152 * 195.02315 * 23 22 20 25 25 Si 1.86308 * 109.46738 * 315.02073 * 23 22 20 26 26 C 1.38372 * 120.28864 * 359.76481 * 22 20 19 27 27 C 1.37929 * 120.16290 * 359.97438 * 26 22 20 28 28 C 1.53779 * 87.17634 * 25.38961 * 12 11 9 29 29 H 1.09006 * 109.47175 * 300.00255 * 1 2 3 30 30 H 1.09009 * 109.46944 * 59.99738 * 1 2 3 31 31 H 1.08994 * 109.47322 * 179.97438 * 1 2 3 32 32 H 1.08998 * 109.46965 * 179.97438 * 3 2 1 33 33 H 1.08997 * 109.47019 * 300.00082 * 3 2 1 34 34 H 1.09000 * 109.46956 * 60.00095 * 3 2 1 35 35 H 1.08997 * 109.46675 * 300.00324 * 4 2 1 36 36 H 1.09002 * 109.46632 * 59.99943 * 4 2 1 37 37 H 1.09000 * 109.47010 * 179.97438 * 4 2 1 38 38 H 0.96998 * 120.00338 * 0.02562 * 8 6 5 39 39 H 1.08996 * 113.61079 * 334.65349 * 11 9 8 40 40 H 1.09000 * 113.61073 * 203.75025 * 11 9 8 41 41 H 1.08998 * 109.47123 * 56.52548 * 14 12 11 42 42 H 1.09004 * 109.46684 * 296.52507 * 14 12 11 43 43 H 1.08004 * 120.07738 * 359.97438 * 19 18 16 44 44 H 1.09000 * 109.47503 * 75.01514 * 23 22 20 45 45 H 0.96704 * 114.00300 * 59.99320 * 24 23 22 46 46 H 1.48497 * 109.99542 * 180.02562 * 25 23 22 47 47 H 1.48502 * 109.99784 * 301.31968 * 25 23 22 48 48 H 1.08000 * 119.91370 * 179.97438 * 26 22 20 49 49 H 1.08007 * 120.05566 * 180.02562 * 27 26 22 50 50 H 1.09003 * 113.61699 * 89.15365 * 28 12 11 51 51 H 1.09006 * 113.61945 * 220.06212 * 28 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7212 -1.2492 5 8 2.0140 -0.6845 1.1855 6 6 1.6522 -1.9723 1.3383 7 8 0.9508 -2.5094 0.5039 8 7 2.0672 -2.6654 2.4171 9 6 1.6730 -4.0666 2.5836 10 1 1.4208 -4.5503 1.6399 11 6 2.6459 -4.8811 3.4526 12 6 1.8037 -4.4470 4.6638 13 1 2.1327 -3.5088 5.1106 14 6 1.5976 -5.5569 5.6965 15 8 0.8649 -5.0298 6.8339 16 6 0.5995 -5.8853 7.8400 17 8 0.9695 -7.0402 7.7689 18 6 -0.1474 -5.4207 9.0269 19 6 -0.5694 -4.0930 9.1141 20 6 -1.2717 -3.6669 10.2241 21 17 -1.8031 -2.0178 10.3327 22 6 -1.5478 -4.5511 11.2532 23 6 -2.3097 -4.0782 12.4644 24 8 -2.1716 -5.0344 13.5173 25 14 -1.6299 -2.4362 13.0235 26 6 -1.1270 -5.8669 11.1746 27 6 -0.4294 -6.3065 10.0690 28 6 0.6247 -4.2851 3.6897 29 1 -0.3634 0.5139 0.8900 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3633 -1.0276 -0.0005 32 1 3.1300 1.4425 0.0005 33 1 1.6767 1.9563 -0.8900 34 1 1.6767 1.9563 0.8900 35 1 1.6767 -1.7488 -1.2492 36 1 1.6767 -0.2073 -2.1392 37 1 3.1300 -0.7208 -1.2494 38 1 2.6261 -2.2363 3.0837 39 1 3.6608 -4.4836 3.4615 40 1 2.6117 -5.9532 3.2587 41 1 2.5669 -5.9283 6.0290 42 1 1.0313 -6.3720 5.2456 43 1 -0.3504 -3.4017 8.3138 44 1 -3.3639 -3.9673 12.2101 45 1 -1.2576 -5.1839 13.7955 46 1 -2.3725 -1.9593 14.2178 47 1 -0.1854 -2.5667 13.3428 48 1 -1.3453 -6.5513 11.9811 49 1 -0.1021 -7.3341 10.0092 50 1 0.0369 -5.1940 3.5607 51 1 0.0103 -3.4073 3.8898 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_8687484_15734084.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 09:40:16 Heat of formation + Delta-G solvation = -153.308485 kcal Electronic energy + Delta-G solvation = -34375.535355 eV Core-core repulsion = 29461.547223 eV Total energy + Delta-G solvation = -4913.988132 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 398.142 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -42.01024 -41.79511 -40.74315 -40.21062 -38.16100 -38.09836 -37.75225 -37.36223 -35.35928 -34.11164 -33.15414 -32.11871 -29.82340 -28.36693 -28.29939 -27.77802 -26.73957 -24.93122 -24.00651 -23.88099 -23.05251 -21.95390 -21.16150 -20.33823 -19.34479 -19.32601 -18.81257 -18.09753 -17.60098 -17.56827 -17.19123 -17.03823 -16.74099 -16.57569 -16.36331 -15.97401 -15.82374 -15.46636 -15.35427 -15.22344 -15.09742 -14.74165 -14.54405 -14.48068 -14.33172 -13.74635 -13.66207 -13.53616 -13.36164 -13.27950 -13.10452 -13.02481 -12.91665 -12.86589 -12.83276 -12.69078 -12.54356 -12.51160 -12.33217 -12.15723 -12.05932 -11.93078 -11.82817 -11.53714 -11.39455 -11.19841 -11.12125 -10.98066 -10.18953 -10.14665 -9.90849 -4.70011 -0.70659 -0.07263 0.70814 1.05467 1.12750 1.32543 1.44330 1.50506 1.72629 1.90098 2.41139 3.10578 3.14268 3.17804 3.38345 3.42605 3.52969 3.66768 3.74202 3.76064 3.80906 3.86607 3.88327 3.94524 4.06036 4.14349 4.20975 4.35592 4.41205 4.43903 4.48163 4.61325 4.61543 4.63648 4.70253 4.73750 4.75786 4.76784 4.83045 4.87931 4.89382 4.93797 5.01930 5.03639 5.05092 5.07419 5.16423 5.27097 5.27231 5.32803 5.39129 5.48292 5.61739 6.38099 6.39380 6.54100 7.33285 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.128 3.872 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.369 6.369 6 C 0.646 3.354 7 O -0.593 6.593 8 N -0.683 5.683 9 C 0.131 3.869 10 H 0.095 0.905 11 C -0.121 4.121 12 C -0.102 4.102 13 H 0.113 0.887 14 C 0.073 3.927 15 O -0.347 6.347 16 C 0.514 3.486 17 O -0.530 6.530 18 C -0.131 4.131 19 C -0.035 4.035 20 C -0.070 4.070 21 Cl 0.049 6.951 22 C -0.065 4.065 23 C -0.070 4.070 24 O -0.544 6.544 25 Si 0.645 3.355 26 C -0.109 4.109 27 C -0.043 4.043 28 C -0.145 4.145 29 H 0.062 0.938 30 H 0.086 0.914 31 H 0.063 0.937 32 H 0.069 0.931 33 H 0.098 0.902 34 H 0.070 0.930 35 H 0.063 0.937 36 H 0.086 0.914 37 H 0.062 0.938 38 H 0.418 0.582 39 H 0.095 0.905 40 H 0.114 0.886 41 H 0.078 0.922 42 H 0.075 0.925 43 H 0.170 0.830 44 H 0.142 0.858 45 H 0.389 0.611 46 H -0.280 1.280 47 H -0.279 1.279 48 H 0.163 0.837 49 H 0.150 0.850 50 H 0.099 0.901 51 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.050 3.442 -1.295 4.211 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.238 4.238 5 O -0.283 6.283 6 C 0.400 3.600 7 O -0.484 6.484 8 N -0.342 5.342 9 C 0.026 3.974 10 H 0.113 0.887 11 C -0.159 4.159 12 C -0.120 4.120 13 H 0.132 0.868 14 C 0.000 4.000 15 O -0.263 6.263 16 C 0.360 3.640 17 O -0.421 6.421 18 C -0.132 4.132 19 C -0.053 4.053 20 C -0.096 4.096 21 Cl 0.078 6.922 22 C -0.067 4.067 23 C -0.180 4.180 24 O -0.352 6.352 25 Si 0.548 3.452 26 C -0.127 4.127 27 C -0.061 4.061 28 C -0.184 4.184 29 H 0.081 0.919 30 H 0.105 0.895 31 H 0.082 0.918 32 H 0.088 0.912 33 H 0.116 0.884 34 H 0.089 0.911 35 H 0.082 0.918 36 H 0.105 0.895 37 H 0.081 0.919 38 H 0.255 0.745 39 H 0.114 0.886 40 H 0.132 0.868 41 H 0.096 0.904 42 H 0.094 0.906 43 H 0.187 0.813 44 H 0.159 0.841 45 H 0.239 0.761 46 H -0.206 1.206 47 H -0.205 1.205 48 H 0.181 0.819 49 H 0.167 0.833 50 H 0.117 0.883 51 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges 1.536 3.501 -1.239 4.019 hybrid contribution 0.641 -0.996 0.785 1.421 sum 2.178 2.505 -0.454 3.350 Atomic orbital electron populations 1.22474 0.94037 1.03691 1.03524 1.22350 0.94456 0.92568 0.81479 1.21893 1.02468 0.90868 1.04260 1.22478 1.01656 1.02254 0.97374 1.86311 1.71537 1.23207 1.47257 1.18319 0.78571 0.80794 0.82360 1.90910 1.42128 1.70916 1.44449 1.44349 1.54914 1.11930 1.23008 1.21856 0.96956 0.79225 0.99338 0.88703 1.23331 0.98855 1.01734 0.91999 1.22671 0.97758 0.98982 0.92579 0.86844 1.23341 0.96100 0.97177 0.83360 1.86519 1.69038 1.42423 1.28352 1.21159 0.76571 0.83348 0.82894 1.90863 1.51062 1.20015 1.80166 1.19075 1.04757 0.95158 0.94220 1.21440 0.92400 0.94895 0.96589 1.20625 1.04288 0.87234 0.97491 1.98289 1.88979 1.17311 1.87658 1.20592 0.96666 0.94028 0.95380 1.25080 1.05427 1.01776 0.85679 1.86551 1.33851 1.61532 1.53245 0.93351 0.78199 0.84420 0.89274 1.21077 0.97899 0.94629 0.99123 1.21543 0.93261 1.00361 0.90937 1.23594 0.96693 1.03229 0.94873 0.91869 0.89538 0.91791 0.91163 0.88371 0.91120 0.91776 0.89527 0.91907 0.74518 0.88648 0.86784 0.90367 0.90622 0.81292 0.84090 0.76146 1.20606 1.20480 0.81919 0.83277 0.88294 0.91207 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.45 8.37 71.98 0.60 0.15 16 2 C 0.13 0.27 1.13 -10.79 -0.01 0.25 16 3 C -0.14 0.40 8.85 71.98 0.64 1.03 16 4 C -0.18 -0.46 8.37 71.98 0.60 0.15 16 5 O -0.37 -1.58 9.94 -55.50 -0.55 -2.13 16 6 C 0.65 3.47 8.06 129.79 1.05 4.51 16 7 O -0.59 -6.53 11.48 19.81 0.23 -6.30 16 8 N -0.68 1.00 5.27 -567.30 -2.99 -1.99 16 9 C 0.13 -0.41 4.33 45.58 0.20 -0.21 16 10 H 0.09 0.06 7.46 -2.39 -0.02 0.05 16 11 C -0.12 0.99 7.39 31.12 0.23 1.22 16 12 C -0.10 0.70 3.89 -10.27 -0.04 0.66 16 13 H 0.11 -0.93 8.14 -2.38 -0.02 -0.95 16 14 C 0.07 -0.25 5.30 71.98 0.38 0.13 16 15 O -0.35 0.10 9.47 -56.19 -0.53 -0.43 16 16 C 0.51 1.55 7.90 70.33 0.56 2.10 16 17 O -0.53 -4.51 16.14 19.92 0.32 -4.19 16 18 C -0.13 -0.01 5.87 -20.10 -0.12 -0.13 16 19 C -0.03 0.10 9.40 22.56 0.21 0.32 16 20 C -0.07 0.21 5.88 22.29 0.13 0.34 16 21 Cl 0.05 -0.25 23.24 -2.72 -0.06 -0.31 16 22 C -0.07 0.14 5.14 -19.78 -0.10 0.03 16 23 C -0.07 0.10 2.87 71.23 0.20 0.31 16 24 O -0.54 -0.07 11.63 -148.98 -1.73 -1.80 16 25 Si 0.65 0.61 27.57 68.60 1.89 2.50 16 26 C -0.11 0.28 9.22 22.23 0.20 0.49 16 27 C -0.04 0.04 9.59 22.54 0.22 0.26 16 28 C -0.15 0.61 7.44 31.18 0.23 0.85 16 29 H 0.06 0.11 8.14 -2.38 -0.02 0.09 16 30 H 0.09 -0.07 8.14 -2.38 -0.02 -0.09 16 31 H 0.06 0.50 5.88 -2.39 -0.01 0.49 16 32 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 33 H 0.10 -0.59 8.14 -2.39 -0.02 -0.61 16 34 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 35 H 0.06 0.50 5.88 -2.39 -0.01 0.49 16 36 H 0.09 -0.07 8.14 -2.39 -0.02 -0.09 16 37 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 38 H 0.42 -2.54 8.81 -92.71 -0.82 -3.36 16 39 H 0.09 -0.93 8.14 -2.39 -0.02 -0.95 16 40 H 0.11 -1.09 8.10 -2.39 -0.02 -1.11 16 41 H 0.08 -0.27 8.14 -2.39 -0.02 -0.29 16 42 H 0.08 -0.22 7.87 -2.38 -0.02 -0.23 16 43 H 0.17 -1.07 7.61 -2.91 -0.02 -1.09 16 44 H 0.14 -0.47 7.96 -2.39 -0.02 -0.49 16 45 H 0.39 -2.19 8.43 -74.05 -0.62 -2.82 16 46 H -0.28 -2.23 7.11 99.48 0.71 -1.52 16 47 H -0.28 -1.62 7.11 99.48 0.71 -0.92 16 48 H 0.16 -0.86 7.07 -2.91 -0.02 -0.88 16 49 H 0.15 -0.21 7.65 -2.91 -0.02 -0.23 16 50 H 0.10 -0.45 7.92 -2.39 -0.02 -0.47 16 51 H 0.07 -0.14 8.14 -2.38 -0.02 -0.16 16 Total: 0.00 -19.05 428.16 1.32 -17.73 By element: Atomic # 1 Polarization: -15.10 SS G_CDS: -0.43 Total: -15.53 kcal Atomic # 6 Polarization: 7.28 SS G_CDS: 5.18 Total: 12.46 kcal Atomic # 7 Polarization: 1.00 SS G_CDS: -2.99 Total: -1.99 kcal Atomic # 8 Polarization: -12.59 SS G_CDS: -2.27 Total: -14.86 kcal Atomic # 14 Polarization: 0.61 SS G_CDS: 1.89 Total: 2.50 kcal Atomic # 17 Polarization: -0.25 SS G_CDS: -0.06 Total: -0.31 kcal Total: -19.05 1.32 -17.73 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_8687484_15734084.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -135.580 kcal (2) G-P(sol) polarization free energy of solvation -19.053 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -154.633 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.325 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.729 kcal (6) G-S(sol) free energy of system = (1) + (5) -153.308 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds