Wall clock time and date at job start Sat Mar 6 2021 09:40:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.53000 * 109.47502 * 2 1 4 4 C 1.53004 * 109.47353 * 240.00068 * 2 1 3 5 5 O 1.45198 * 109.46841 * 120.00371 * 2 1 3 6 6 C 1.34638 * 117.00226 * 60.00132 * 5 2 1 7 7 O 1.21507 * 120.00189 * 359.97438 * 6 5 2 8 8 N 1.34784 * 119.99962 * 179.97438 * 6 5 2 9 9 C 1.46494 * 119.99635 * 179.97438 * 8 6 5 10 10 H 1.09000 * 112.85565 * 334.66170 * 9 8 6 11 11 C 1.53785 * 113.61451 * 105.86837 * 9 8 6 12 12 C 1.53954 * 87.01876 * 139.94831 * 11 9 8 13 13 H 1.09008 * 113.61464 * 89.20280 * 12 11 9 14 14 C 1.52998 * 113.66257 * 220.06007 * 12 11 9 15 15 O 1.45195 * 109.47524 * 272.55957 * 14 12 11 16 16 C 1.34711 * 116.99785 * 179.97438 * 15 14 12 17 17 O 1.21471 * 120.00356 * 0.02562 * 16 15 14 18 18 C 1.47732 * 120.00062 * 180.02562 * 16 15 14 19 19 C 1.39598 * 120.13938 * 359.72585 * 18 16 15 20 20 C 1.38094 * 119.82930 * 179.76863 * 19 18 16 21 21 Cl 1.73602 * 119.93525 * 180.25132 * 20 19 18 22 22 C 1.38450 * 120.12471 * 0.50895 * 20 19 18 23 23 C 1.50703 * 119.85868 * 179.72060 * 22 20 19 24 24 O 1.42893 * 109.47467 * 195.02022 * 23 22 20 25 25 Si 1.86304 * 109.46855 * 315.02405 * 23 22 20 26 26 C 1.38372 * 120.29149 * 359.74079 * 22 20 19 27 27 C 1.37929 * 120.16445 * 0.02562 * 26 22 20 28 28 C 1.53773 * 87.11525 * 334.63488 * 12 11 9 29 29 H 1.08998 * 109.47144 * 299.99721 * 1 2 3 30 30 H 1.08999 * 109.46619 * 59.99987 * 1 2 3 31 31 H 1.08996 * 109.46980 * 179.97438 * 1 2 3 32 32 H 1.08997 * 109.47145 * 179.97438 * 3 2 1 33 33 H 1.08999 * 109.47198 * 300.00218 * 3 2 1 34 34 H 1.09006 * 109.46544 * 59.99729 * 3 2 1 35 35 H 1.09005 * 109.46836 * 300.00480 * 4 2 1 36 36 H 1.08999 * 109.46845 * 60.00089 * 4 2 1 37 37 H 1.08994 * 109.47403 * 180.02562 * 4 2 1 38 38 H 0.96995 * 120.00015 * 359.72331 * 8 6 5 39 39 H 1.09001 * 113.60566 * 254.52635 * 11 9 8 40 40 H 1.08989 * 113.61520 * 25.42515 * 11 9 8 41 41 H 1.08997 * 109.47244 * 32.56861 * 14 12 11 42 42 H 1.09003 * 109.47100 * 152.55713 * 14 12 11 43 43 H 1.07995 * 120.08279 * 359.97438 * 19 18 16 44 44 H 1.08998 * 109.46656 * 75.01801 * 23 22 20 45 45 H 0.96698 * 113.99958 * 60.00215 * 24 23 22 46 46 H 1.48497 * 109.99916 * 179.97438 * 25 23 22 47 47 H 1.48505 * 109.99523 * 301.31576 * 25 23 22 48 48 H 1.07997 * 119.91870 * 180.02562 * 26 22 20 49 49 H 1.07998 * 120.06228 * 179.97438 * 27 26 22 50 50 H 1.08995 * 113.61786 * 270.81446 * 28 12 11 51 51 H 1.09000 * 113.69155 * 139.92157 * 28 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0401 -0.7212 -1.2493 5 8 2.0139 -0.6846 1.1855 6 6 1.6522 -1.9724 1.3382 7 8 0.9509 -2.5095 0.5039 8 7 2.0680 -2.6659 2.4166 9 6 1.6739 -4.0670 2.5830 10 1 0.7448 -4.3095 2.0671 11 6 2.8113 -5.0640 2.3052 12 6 2.2920 -5.8687 3.5106 13 1 1.5326 -6.6058 3.2491 14 6 3.4041 -6.4472 4.3878 15 8 3.8033 -7.7439 3.8707 16 6 4.7805 -8.3922 4.5337 17 8 5.2850 -7.8882 5.5171 18 6 5.2388 -9.7160 4.0648 19 6 4.6572 -10.3005 2.9384 20 6 5.0938 -11.5361 2.5029 21 17 4.3770 -12.2626 1.0985 22 6 6.0983 -12.1990 3.1872 23 6 6.5658 -13.5500 2.7103 24 8 7.3311 -14.1799 3.7396 25 14 5.0889 -14.6083 2.2985 26 6 6.6748 -11.6267 4.3074 27 6 6.2513 -10.3909 4.7501 28 6 1.7113 -4.5482 4.0431 29 1 -0.3633 0.5138 0.8900 30 1 -0.3632 0.5138 -0.8900 31 1 -0.3633 -1.0276 -0.0005 32 1 3.1301 1.4424 0.0005 33 1 1.6768 1.9563 -0.8899 34 1 1.6767 1.9563 0.8900 35 1 1.6767 -1.7489 -1.2493 36 1 1.6768 -0.2074 -2.1392 37 1 3.1300 -0.7216 -1.2490 38 1 2.6311 -2.2383 3.0806 39 1 2.7109 -5.5868 1.3540 40 1 3.8060 -4.6447 2.4560 41 1 4.2607 -5.7734 4.3798 42 1 3.0399 -6.5597 5.4090 43 1 3.8702 -9.7862 2.4070 44 1 7.1842 -13.4273 1.8211 45 1 6.8429 -14.3210 4.5622 46 1 5.5365 -15.9432 1.8263 47 1 4.2211 -14.7567 3.4944 48 1 7.4582 -12.1489 4.8364 49 1 6.7020 -9.9460 5.6248 50 1 2.4047 -3.9876 4.6700 51 1 0.7243 -4.6538 4.4935 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_8687484_15734238.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 09:40:20 Heat of formation + Delta-G solvation = -155.517427 kcal Electronic energy + Delta-G solvation = -34115.602275 eV Core-core repulsion = 29201.518355 eV Total energy + Delta-G solvation = -4914.083919 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 398.142 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -41.97125 -41.79030 -40.72818 -40.15420 -38.15904 -38.11702 -37.75715 -37.36108 -35.40352 -34.24111 -33.15886 -32.11491 -29.80715 -28.37387 -28.31032 -27.76734 -26.74604 -25.01699 -24.03761 -23.88568 -22.45867 -21.94063 -21.39965 -20.55802 -19.39640 -19.06321 -18.82462 -18.24319 -17.65083 -17.57635 -17.18034 -17.03650 -16.79797 -16.59730 -16.26162 -16.16315 -15.91942 -15.55930 -15.40515 -15.10262 -14.91427 -14.72349 -14.55575 -14.45860 -14.22138 -13.65727 -13.59248 -13.48217 -13.37073 -13.21337 -13.10463 -12.97800 -12.89835 -12.87375 -12.81708 -12.68657 -12.56645 -12.50913 -12.44715 -12.26620 -12.08181 -11.99628 -11.83902 -11.60828 -11.39917 -11.27274 -11.10570 -10.97884 -10.15483 -10.14245 -9.90641 -4.69719 -0.70430 -0.06894 0.71325 1.05576 1.15669 1.32827 1.45949 1.50813 1.73363 1.90112 2.41420 3.11451 3.15381 3.19450 3.37283 3.43049 3.53920 3.68017 3.73553 3.74565 3.79826 3.84516 3.88477 3.93806 4.05435 4.14098 4.17864 4.26240 4.40229 4.44332 4.50877 4.60608 4.62329 4.64244 4.70450 4.71133 4.75750 4.77882 4.79389 4.85589 4.86871 4.96311 4.99244 5.02419 5.05443 5.08969 5.17958 5.26447 5.26609 5.32651 5.39529 5.50575 5.59538 6.39612 6.39620 6.53973 7.33726 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.371 6.371 6 C 0.643 3.357 7 O -0.594 6.594 8 N -0.691 5.691 9 C 0.135 3.865 10 H 0.108 0.892 11 C -0.147 4.147 12 C -0.098 4.098 13 H 0.117 0.883 14 C 0.077 3.923 15 O -0.347 6.347 16 C 0.515 3.485 17 O -0.530 6.530 18 C -0.131 4.131 19 C -0.035 4.035 20 C -0.070 4.070 21 Cl 0.049 6.951 22 C -0.065 4.065 23 C -0.070 4.070 24 O -0.544 6.544 25 Si 0.644 3.356 26 C -0.109 4.109 27 C -0.043 4.043 28 C -0.122 4.122 29 H 0.062 0.938 30 H 0.086 0.914 31 H 0.064 0.936 32 H 0.069 0.931 33 H 0.098 0.902 34 H 0.069 0.931 35 H 0.064 0.936 36 H 0.086 0.914 37 H 0.061 0.939 38 H 0.417 0.583 39 H 0.072 0.928 40 H 0.090 0.910 41 H 0.075 0.925 42 H 0.079 0.921 43 H 0.170 0.830 44 H 0.142 0.858 45 H 0.389 0.611 46 H -0.279 1.279 47 H -0.280 1.280 48 H 0.164 0.836 49 H 0.150 0.850 50 H 0.106 0.894 51 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.090 3.049 -0.156 3.242 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.285 6.285 6 C 0.396 3.604 7 O -0.485 6.485 8 N -0.350 5.350 9 C 0.031 3.969 10 H 0.126 0.874 11 C -0.185 4.185 12 C -0.117 4.117 13 H 0.135 0.865 14 C 0.003 3.997 15 O -0.263 6.263 16 C 0.361 3.639 17 O -0.421 6.421 18 C -0.132 4.132 19 C -0.053 4.053 20 C -0.097 4.097 21 Cl 0.077 6.923 22 C -0.067 4.067 23 C -0.179 4.179 24 O -0.352 6.352 25 Si 0.547 3.453 26 C -0.127 4.127 27 C -0.061 4.061 28 C -0.160 4.160 29 H 0.081 0.919 30 H 0.105 0.895 31 H 0.083 0.917 32 H 0.088 0.912 33 H 0.117 0.883 34 H 0.088 0.912 35 H 0.083 0.917 36 H 0.105 0.895 37 H 0.080 0.920 38 H 0.254 0.746 39 H 0.091 0.909 40 H 0.109 0.891 41 H 0.094 0.906 42 H 0.098 0.902 43 H 0.187 0.813 44 H 0.159 0.841 45 H 0.239 0.761 46 H -0.206 1.206 47 H -0.205 1.205 48 H 0.181 0.819 49 H 0.168 0.832 50 H 0.125 0.875 51 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -1.380 2.292 -0.734 2.774 hybrid contribution 0.624 -0.030 1.385 1.519 sum -0.756 2.262 0.650 2.472 Atomic orbital electron populations 1.22471 0.93995 1.03731 1.03495 1.22346 0.94491 0.92553 0.81543 1.21893 1.02422 0.90955 1.04234 1.22470 1.01581 1.02284 0.97356 1.86313 1.71560 1.23423 1.47243 1.18439 0.78594 0.80678 0.82657 1.90900 1.42321 1.71042 1.44201 1.44790 1.54618 1.12414 1.23157 1.22569 0.99018 0.77013 0.98275 0.87375 1.23651 0.99092 0.96694 0.99099 1.22360 0.97194 0.96387 0.95780 0.86527 1.23281 0.97886 0.80160 0.98331 1.86519 1.50638 1.34233 1.54955 1.21149 0.76950 0.85375 0.80444 1.90860 1.56250 1.68078 1.26877 1.19076 1.01642 0.93118 0.99386 1.21454 0.97909 0.92255 0.93729 1.20628 0.99268 0.96240 0.93520 1.98291 1.82309 1.73565 1.38103 1.20591 0.93869 0.96965 0.95247 1.25071 1.05738 0.92531 0.94576 1.86549 1.41610 1.80773 1.26230 0.93340 0.80015 0.81243 0.90733 1.21077 1.00689 0.94931 0.96033 1.21543 0.92685 0.93536 0.98310 1.23354 1.03540 0.94155 0.94931 0.91944 0.89513 0.91707 0.91239 0.88343 0.91190 0.91720 0.89501 0.92025 0.74601 0.90883 0.89139 0.90618 0.90230 0.81266 0.84085 0.76146 1.20555 1.20520 0.81903 0.83243 0.87547 0.88533 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.50 8.37 71.98 0.60 0.10 16 2 C 0.13 0.33 1.13 -10.79 -0.01 0.32 16 3 C -0.14 0.32 8.85 71.98 0.64 0.95 16 4 C -0.18 -0.52 8.37 71.98 0.60 0.08 16 5 O -0.37 -1.84 9.94 -55.47 -0.55 -2.39 16 6 C 0.64 3.73 8.06 129.79 1.05 4.78 16 7 O -0.59 -6.58 11.50 19.82 0.23 -6.35 16 8 N -0.69 0.70 5.36 -567.59 -3.04 -2.34 16 9 C 0.13 -0.44 4.21 45.52 0.19 -0.25 16 10 H 0.11 0.00 7.50 -2.39 -0.02 -0.02 16 11 C -0.15 0.61 7.45 31.18 0.23 0.84 16 12 C -0.10 0.64 4.02 -10.21 -0.04 0.60 16 13 H 0.12 -0.84 8.14 -2.38 -0.02 -0.86 16 14 C 0.08 -0.26 5.31 71.98 0.38 0.12 16 15 O -0.35 0.07 9.47 -56.21 -0.53 -0.46 16 16 C 0.51 1.52 7.90 70.33 0.56 2.08 16 17 O -0.53 -4.40 16.14 19.93 0.32 -4.07 16 18 C -0.13 -0.01 5.87 -20.10 -0.12 -0.13 16 19 C -0.03 0.10 9.40 22.56 0.21 0.31 16 20 C -0.07 0.20 5.88 22.29 0.13 0.33 16 21 Cl 0.05 -0.23 23.24 -2.72 -0.06 -0.29 16 22 C -0.07 0.13 5.14 -19.78 -0.10 0.03 16 23 C -0.07 0.09 2.87 71.24 0.20 0.30 16 24 O -0.54 -0.10 11.63 -148.98 -1.73 -1.83 16 25 Si 0.64 0.74 27.58 68.60 1.89 2.63 16 26 C -0.11 0.28 9.22 22.23 0.20 0.49 16 27 C -0.04 0.04 9.60 22.54 0.22 0.26 16 28 C -0.12 1.00 7.39 31.12 0.23 1.23 16 29 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 30 H 0.09 -0.05 8.14 -2.39 -0.02 -0.07 16 31 H 0.06 0.51 5.88 -2.39 -0.01 0.50 16 32 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 33 H 0.10 -0.54 8.14 -2.39 -0.02 -0.56 16 34 H 0.07 -0.18 8.14 -2.38 -0.02 -0.20 16 35 H 0.06 0.52 5.88 -2.38 -0.01 0.51 16 36 H 0.09 -0.04 8.14 -2.39 -0.02 -0.06 16 37 H 0.06 0.14 8.14 -2.39 -0.02 0.13 16 38 H 0.42 -2.29 8.82 -92.71 -0.82 -3.11 16 39 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 40 H 0.09 -0.39 7.90 -2.39 -0.02 -0.40 16 41 H 0.08 -0.24 7.85 -2.39 -0.02 -0.26 16 42 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 43 H 0.17 -1.04 7.61 -2.91 -0.02 -1.06 16 44 H 0.14 -0.46 7.96 -2.39 -0.02 -0.47 16 45 H 0.39 -2.17 8.43 -74.06 -0.62 -2.79 16 46 H -0.28 -2.26 7.11 99.48 0.71 -1.56 16 47 H -0.28 -1.70 7.11 99.48 0.71 -0.99 16 48 H 0.16 -0.87 7.07 -2.91 -0.02 -0.89 16 49 H 0.15 -0.23 7.65 -2.91 -0.02 -0.25 16 50 H 0.11 -1.10 8.07 -2.39 -0.02 -1.12 16 51 H 0.10 -0.90 8.14 -2.39 -0.02 -0.92 16 Total: 0.00 -18.96 428.29 1.26 -17.69 By element: Atomic # 1 Polarization: -14.58 SS G_CDS: -0.43 Total: -15.01 kcal Atomic # 6 Polarization: 7.25 SS G_CDS: 5.18 Total: 12.43 kcal Atomic # 7 Polarization: 0.70 SS G_CDS: -3.04 Total: -2.34 kcal Atomic # 8 Polarization: -12.84 SS G_CDS: -2.27 Total: -15.11 kcal Atomic # 14 Polarization: 0.74 SS G_CDS: 1.89 Total: 2.63 kcal Atomic # 17 Polarization: -0.23 SS G_CDS: -0.06 Total: -0.29 kcal Total: -18.96 1.26 -17.69 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_8687484_15734238.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -137.825 kcal (2) G-P(sol) polarization free energy of solvation -18.956 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -156.781 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.263 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.692 kcal (6) G-S(sol) free energy of system = (1) + (5) -155.517 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.39 seconds