Wall clock time and date at job start Sat Mar 6 2021 10:08:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86298 * 109.47047 * 2 1 4 4 C 1.50701 * 109.46985 * 120.00182 * 2 1 3 5 5 C 1.38319 * 119.85238 * 255.35518 * 4 2 1 6 6 C 1.37976 * 120.16386 * 180.02562 * 5 4 2 7 7 C 1.39603 * 119.87335 * 359.97438 * 6 5 4 8 8 C 1.47726 * 120.14566 * 179.97438 * 7 6 5 9 9 O 1.21472 * 120.00089 * 0.02562 * 8 7 6 10 10 O 1.34708 * 120.00178 * 179.97438 * 8 7 6 11 11 C 1.45207 * 117.00330 * 180.02562 * 10 8 7 12 12 C 1.52996 * 109.47288 * 179.97438 * 11 10 8 13 13 H 1.08991 * 109.47485 * 305.00004 * 12 11 10 14 14 C 1.53001 * 109.46817 * 65.00205 * 12 11 10 15 15 C 1.53005 * 109.46950 * 179.97438 * 14 12 11 16 16 C 1.52993 * 109.47351 * 299.99932 * 15 14 12 17 17 H 1.08995 * 109.47552 * 300.00043 * 16 15 14 18 18 O 1.42900 * 109.47332 * 179.97438 * 16 15 14 19 19 C 1.53000 * 109.47041 * 59.99726 * 16 15 14 20 20 C 1.53002 * 109.47441 * 299.99993 * 19 16 15 21 21 C 1.39639 * 119.71554 * 0.25563 * 7 6 5 22 22 C 1.38052 * 119.82989 * 359.46590 * 21 7 6 23 23 Cl 1.73592 * 119.93842 * 180.27639 * 22 21 7 24 24 H 0.96704 * 113.99826 * 299.99911 * 1 2 3 25 25 H 1.09001 * 109.47053 * 240.00752 * 2 1 3 26 26 H 1.48500 * 110.00296 * 185.27490 * 3 2 1 27 27 H 1.48494 * 110.00543 * 306.59658 * 3 2 1 28 28 H 1.07999 * 119.92102 * 0.02562 * 5 4 2 29 29 H 1.07994 * 120.06405 * 179.97438 * 6 5 4 30 30 H 1.09002 * 109.46973 * 59.99551 * 11 10 8 31 31 H 1.09001 * 109.46769 * 300.00418 * 11 10 8 32 32 H 1.08997 * 109.47249 * 299.99253 * 14 12 11 33 33 H 1.08999 * 109.47466 * 60.00291 * 14 12 11 34 34 H 1.08997 * 109.47484 * 179.97438 * 15 14 12 35 35 H 1.09007 * 109.46730 * 60.00053 * 15 14 12 36 36 H 0.96707 * 113.99699 * 60.00141 * 18 16 15 37 37 H 1.09008 * 109.47293 * 179.97438 * 19 16 15 38 38 H 1.09004 * 109.47281 * 60.00332 * 19 16 15 39 39 H 1.08995 * 109.46884 * 300.00374 * 20 19 16 40 40 H 1.08998 * 109.47203 * 179.97438 * 20 19 16 41 41 H 1.07999 * 120.08768 * 179.75116 * 21 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 2.4467 0.0207 2.2854 6 6 2.9089 -0.6232 3.4148 7 6 2.8552 -2.0161 3.4922 8 6 3.3489 -2.7117 4.6983 9 8 3.8024 -2.0716 5.6258 10 8 3.2952 -4.0558 4.7701 11 6 3.7974 -4.6717 5.9854 12 6 3.6545 -6.1916 5.8836 13 1 2.6174 -6.4451 5.6645 14 6 4.5552 -6.7145 4.7628 15 6 4.4128 -8.2345 4.6614 16 6 4.8255 -8.8751 5.9880 17 1 5.8626 -8.6212 6.2070 18 8 4.6919 -10.2947 5.8935 19 6 3.9248 -8.3521 7.1088 20 6 4.0673 -6.8321 7.2103 21 6 2.3383 -2.7493 2.4222 22 6 1.8739 -2.0925 1.3003 23 17 1.2240 -3.0009 -0.0286 24 1 -0.3933 0.4417 0.7651 25 1 1.7923 -0.5137 -0.8901 26 1 3.5293 1.7722 -0.1283 27 1 1.4350 2.5127 -1.1203 28 1 2.4876 1.0982 2.2250 29 1 3.3114 -0.0508 4.2374 30 1 3.2251 -4.3096 6.8395 31 1 4.8482 -4.4131 6.1163 32 1 4.2614 -6.2579 3.8177 33 1 5.5924 -6.4610 4.9820 34 1 5.0540 -8.6071 3.8626 35 1 3.3755 -8.4884 4.4424 36 1 5.2357 -10.6957 5.2016 37 1 4.2186 -8.8088 8.0540 38 1 2.8876 -8.6060 6.8899 39 1 5.1044 -6.5783 7.4292 40 1 3.4253 -6.4595 8.0085 41 1 2.2976 -3.8273 2.4740 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_8687484_16737258.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 10:08:55 Heat of formation + Delta-G solvation = -158.035704 kcal Electronic energy + Delta-G solvation = -25215.441521 eV Core-core repulsion = 21280.195501 eV Total energy + Delta-G solvation = -3935.246020 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 327.100 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -41.87366 -40.62791 -39.98409 -37.97629 -37.62161 -37.45256 -36.58649 -33.32482 -32.03390 -31.85909 -31.83531 -28.08370 -26.48491 -24.17468 -24.01639 -23.72174 -22.33541 -21.88276 -20.89256 -19.42254 -18.42567 -18.21813 -18.15777 -17.61042 -16.90037 -16.66601 -16.53000 -16.20245 -15.76856 -15.53403 -15.38795 -15.07456 -14.97274 -14.57995 -14.42470 -14.31423 -13.94117 -13.76242 -13.62803 -13.22969 -13.12436 -12.87236 -12.67087 -12.57315 -12.34981 -12.19533 -12.15309 -12.07521 -11.87974 -11.71728 -11.63079 -11.51355 -11.11050 -10.72505 -10.52964 -10.31503 -9.97659 -5.01225 -0.69820 -0.04749 0.96928 1.21373 1.23540 1.43679 1.66107 1.98666 2.38294 3.16055 3.24024 3.47996 3.52738 3.61479 3.64469 3.71679 3.75585 3.90372 4.02335 4.03454 4.13684 4.16421 4.24906 4.33546 4.34085 4.41943 4.46483 4.48086 4.52567 4.59054 4.76995 4.79460 4.93119 4.96936 5.02681 5.05356 5.06918 5.13911 5.16184 5.24519 5.30705 5.39720 5.43369 6.51953 6.74159 6.84740 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.085 4.085 3 Si 0.785 3.215 4 C -0.077 4.077 5 C -0.101 4.101 6 C -0.042 4.042 7 C -0.121 4.121 8 C 0.513 3.487 9 O -0.525 6.525 10 O -0.350 6.350 11 C 0.070 3.930 12 C -0.083 4.083 13 H 0.083 0.917 14 C -0.110 4.110 15 C -0.146 4.146 16 C 0.100 3.900 17 H 0.062 0.938 18 O -0.591 6.591 19 C -0.113 4.113 20 C -0.105 4.105 21 C -0.054 4.054 22 C -0.041 4.041 23 Cl -0.059 7.059 24 H 0.397 0.603 25 H 0.106 0.894 26 H -0.282 1.282 27 H -0.296 1.296 28 H 0.182 0.818 29 H 0.162 0.838 30 H 0.076 0.924 31 H 0.076 0.924 32 H 0.070 0.930 33 H 0.069 0.931 34 H 0.074 0.926 35 H 0.063 0.937 36 H 0.393 0.607 37 H 0.069 0.931 38 H 0.063 0.937 39 H 0.077 0.923 40 H 0.082 0.918 41 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.958 2.485 1.564 3.088 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.194 4.194 3 Si 0.689 3.311 4 C -0.079 4.079 5 C -0.118 4.118 6 C -0.060 4.060 7 C -0.122 4.122 8 C 0.359 3.641 9 O -0.415 6.415 10 O -0.267 6.267 11 C -0.003 4.003 12 C -0.101 4.101 13 H 0.101 0.899 14 C -0.148 4.148 15 C -0.184 4.184 16 C 0.041 3.959 17 H 0.080 0.920 18 O -0.399 6.399 19 C -0.150 4.150 20 C -0.143 4.143 21 C -0.073 4.073 22 C -0.068 4.068 23 Cl -0.030 7.030 24 H 0.247 0.753 25 H 0.123 0.877 26 H -0.208 1.208 27 H -0.223 1.223 28 H 0.199 0.801 29 H 0.180 0.820 30 H 0.095 0.905 31 H 0.094 0.906 32 H 0.088 0.912 33 H 0.088 0.912 34 H 0.093 0.907 35 H 0.082 0.918 36 H 0.243 0.757 37 H 0.088 0.912 38 H 0.082 0.918 39 H 0.095 0.905 40 H 0.100 0.900 41 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 1.140 2.919 1.242 3.371 hybrid contribution 0.368 -1.112 -0.858 1.452 sum 1.508 1.807 0.385 2.385 Atomic orbital electron populations 1.86559 1.16221 1.82114 1.50314 1.25416 0.86116 1.11536 0.96311 0.93964 0.77282 0.73262 0.86606 1.20758 0.97325 0.92168 0.97614 1.21198 0.97998 1.01311 0.91286 1.21584 0.93911 0.91876 0.98643 1.19100 1.06187 0.94233 0.92719 1.21191 0.75050 0.81175 0.86684 1.90858 1.43715 1.67625 1.39342 1.86515 1.75983 1.20796 1.43379 1.23328 0.99971 0.93009 0.83974 1.21226 1.01619 0.90580 0.96700 0.89872 1.21516 0.99878 0.94685 0.98703 1.22212 1.02522 0.95904 0.97776 1.21920 0.98817 0.80057 0.95065 0.92040 1.86483 1.71429 1.21059 1.60939 1.21455 1.00060 0.95217 0.98278 1.21439 1.03083 0.93660 0.96073 1.21418 0.93931 1.01653 0.90266 1.20816 1.02507 0.92239 0.91264 1.98409 1.84629 1.74057 1.45907 0.75333 0.87677 1.20824 1.22330 0.80145 0.82040 0.90540 0.90614 0.91167 0.91204 0.90702 0.91831 0.75744 0.91196 0.91802 0.90453 0.89953 0.82876 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.85 12.83 -148.98 -1.91 -1.06 16 2 C -0.08 0.20 2.09 71.24 0.15 0.35 16 3 Si 0.78 -4.13 29.91 68.60 2.05 -2.08 16 4 C -0.08 0.19 5.27 -19.78 -0.10 0.09 16 5 C -0.10 0.65 8.64 22.23 0.19 0.84 16 6 C -0.04 0.14 9.60 22.54 0.22 0.36 16 7 C -0.12 -0.04 5.87 -20.10 -0.12 -0.16 16 8 C 0.51 1.87 7.90 70.33 0.56 2.43 16 9 O -0.52 -4.29 16.14 19.93 0.32 -3.97 16 10 O -0.35 -0.63 9.01 -56.18 -0.51 -1.14 16 11 C 0.07 -0.06 4.85 71.98 0.35 0.29 16 12 C -0.08 0.24 2.44 -10.79 -0.03 0.22 16 13 H 0.08 -0.16 8.14 -2.39 -0.02 -0.18 16 14 C -0.11 0.33 5.10 30.60 0.16 0.48 16 15 C -0.15 0.36 5.54 30.59 0.17 0.53 16 16 C 0.10 -0.10 3.47 30.59 0.11 0.01 16 17 H 0.06 -0.15 8.14 -2.39 -0.02 -0.17 16 18 O -0.59 -1.16 13.32 -148.98 -1.98 -3.14 16 19 C -0.11 0.10 5.57 30.59 0.17 0.28 16 20 C -0.11 0.42 5.20 30.60 0.16 0.58 16 21 C -0.05 -0.01 9.40 22.56 0.21 0.21 16 22 C -0.04 -0.03 6.31 22.29 0.14 0.11 16 23 Cl -0.06 -0.20 27.57 -2.72 -0.07 -0.27 16 24 H 0.40 -4.09 8.70 -74.05 -0.64 -4.73 16 25 H 0.11 0.05 7.38 -2.39 -0.02 0.04 16 26 H -0.28 0.06 7.11 99.48 0.71 0.77 16 27 H -0.30 -0.83 7.11 99.48 0.71 -0.12 16 28 H 0.18 -2.43 5.12 -2.91 -0.01 -2.44 16 29 H 0.16 -0.88 7.65 -2.91 -0.02 -0.90 16 30 H 0.08 -0.07 8.14 -2.39 -0.02 -0.09 16 31 H 0.08 -0.07 8.14 -2.39 -0.02 -0.09 16 32 H 0.07 -0.13 7.82 -2.39 -0.02 -0.15 16 33 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 34 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 35 H 0.06 -0.02 8.14 -2.38 -0.02 -0.04 16 36 H 0.39 -2.26 9.08 -74.05 -0.67 -2.94 16 37 H 0.07 0.00 8.14 -2.38 -0.02 -0.02 16 38 H 0.06 0.05 8.14 -2.39 -0.02 0.03 16 39 H 0.08 -0.39 8.14 -2.39 -0.02 -0.41 16 40 H 0.08 -0.42 8.14 -2.39 -0.02 -0.44 16 41 H 0.15 -0.16 7.61 -2.91 -0.02 -0.18 16 Total: 0.00 -17.72 353.14 0.01 -17.71 By element: Atomic # 1 Polarization: -12.45 SS G_CDS: -0.21 Total: -12.66 kcal Atomic # 6 Polarization: 4.28 SS G_CDS: 2.33 Total: 6.60 kcal Atomic # 8 Polarization: -5.23 SS G_CDS: -4.08 Total: -9.31 kcal Atomic # 14 Polarization: -4.13 SS G_CDS: 2.05 Total: -2.08 kcal Atomic # 17 Polarization: -0.20 SS G_CDS: -0.07 Total: -0.27 kcal Total: -17.72 0.01 -17.71 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_8687484_16737258.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -140.321 kcal (2) G-P(sol) polarization free energy of solvation -17.725 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -158.046 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.010 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.714 kcal (6) G-S(sol) free energy of system = (1) + (5) -158.036 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds