Wall clock time and date at job start Sat Mar 6 2021 10:34:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42908 * 1 3 3 C 1.42894 * 113.99627 * 2 1 4 4 C 1.52995 * 112.85291 * 65.97015 * 3 2 1 5 5 F 1.39897 * 109.47190 * 283.46692 * 4 3 2 6 6 F 1.39909 * 109.47052 * 43.46815 * 4 3 2 7 7 F 1.39900 * 109.47404 * 163.46124 * 4 3 2 8 8 C 1.53783 * 113.61658 * 294.77055 * 3 2 1 9 9 C 1.53773 * 87.08604 * 270.88875 * 8 3 2 10 10 H 1.08999 * 113.61612 * 219.93600 * 9 8 3 11 11 C 1.53001 * 113.61662 * 89.11478 * 9 8 3 12 12 O 1.45197 * 109.47146 * 175.00606 * 11 9 8 13 13 C 1.34713 * 116.99874 * 180.02562 * 12 11 9 14 14 O 1.21462 * 119.99891 * 359.97438 * 13 12 11 15 15 C 1.47736 * 119.99805 * 179.97438 * 13 12 11 16 16 C 1.39590 * 120.13875 * 179.97438 * 15 13 12 17 17 C 1.38092 * 119.82968 * 180.25082 * 16 15 13 18 18 Cl 1.73601 * 119.93713 * 179.72018 * 17 16 15 19 19 C 1.38453 * 120.12382 * 359.42661 * 17 16 15 20 20 C 1.50698 * 119.85883 * 180.29857 * 19 17 16 21 21 O 1.42902 * 109.46964 * 75.65207 * 20 19 17 22 22 Si 1.86305 * 109.47352 * 195.65436 * 20 19 17 23 23 C 1.38377 * 120.28719 * 0.59767 * 19 17 16 24 24 C 1.37922 * 120.16514 * 359.68095 * 23 19 17 25 25 C 1.53784 * 113.61473 * 197.27837 * 3 2 1 26 26 H 1.09004 * 109.46597 * 182.57363 * 1 2 3 27 27 H 1.08998 * 109.47018 * 302.57472 * 1 2 3 28 28 H 1.09002 * 109.47002 * 62.57306 * 1 2 3 29 29 H 1.09001 * 113.61581 * 156.33776 * 8 3 2 30 30 H 1.09000 * 113.68816 * 25.44942 * 8 3 2 31 31 H 1.08994 * 109.47115 * 55.00285 * 11 9 8 32 32 H 1.09001 * 109.47022 * 294.99767 * 11 9 8 33 33 H 1.08003 * 120.08776 * 359.97438 * 16 15 13 34 34 H 1.09001 * 109.46960 * 315.65332 * 20 19 17 35 35 H 0.96703 * 113.99906 * 60.00051 * 21 20 19 36 36 H 1.48492 * 110.00068 * 64.31165 * 22 20 19 37 37 H 1.48497 * 110.00111 * 185.63182 * 22 20 19 38 38 H 1.07995 * 119.91357 * 179.69862 * 23 19 17 39 39 H 1.07999 * 120.06301 * 180.02562 * 24 23 19 40 40 H 1.09008 * 113.61064 * 334.57027 * 25 3 2 41 41 H 1.08998 * 113.62187 * 203.66717 * 25 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 1.7273 2.0817 1.2877 5 9 0.4114 2.5560 1.2668 6 9 1.9012 1.2369 2.3893 7 9 2.6109 3.1621 1.3846 8 6 1.7214 2.1084 -1.2794 9 6 2.9973 1.4822 -1.8664 10 1 3.5934 2.1780 -2.4569 11 6 2.7539 0.1523 -2.5826 12 8 3.9884 -0.2978 -3.2005 13 6 3.9448 -1.4621 -3.8765 14 8 2.9042 -2.0846 -3.9475 15 6 5.1627 -1.9819 -4.5316 16 6 5.1210 -3.1884 -5.2324 17 6 6.2645 -3.6709 -5.8379 18 17 6.2176 -5.1747 -6.7041 19 6 7.4468 -2.9547 -5.7606 20 6 8.6895 -3.4835 -6.4293 21 8 8.5955 -3.2775 -7.8403 22 14 10.1812 -2.5840 -5.7683 23 6 7.4940 -1.7583 -5.0668 24 6 6.3604 -1.2682 -4.4527 25 6 3.4899 1.3211 -0.4185 26 1 -0.3633 -1.0267 0.0461 27 1 -0.3633 0.5533 0.8660 28 1 -0.3633 0.4734 -0.9122 29 1 1.7880 3.1876 -1.1420 30 1 0.8093 1.8025 -1.7919 31 1 1.9916 0.2871 -3.3499 32 1 2.4161 -0.5922 -1.8616 33 1 4.1980 -3.7453 -5.2972 34 1 8.7872 -4.5494 -6.2235 35 1 8.5062 -2.3495 -8.0972 36 1 10.3497 -2.8745 -4.3218 37 1 11.3962 -2.9987 -6.5145 38 1 8.4206 -1.2070 -5.0062 39 1 6.3990 -0.3341 -3.9120 40 1 4.0055 0.3783 -0.2351 41 1 4.0401 2.1850 -0.0458 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_8687484_17321610.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 10:34:55 Heat of formation + Delta-G solvation = -247.091782 kcal Electronic energy + Delta-G solvation = -32994.979292 eV Core-core repulsion = 27647.509584 eV Total energy + Delta-G solvation = -5347.469708 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.072 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -51.24843 -48.77953 -48.72092 -41.97246 -41.27266 -40.38681 -37.93270 -37.59775 -37.50474 -36.89615 -33.20536 -32.09638 -30.72306 -28.35789 -27.99749 -27.00187 -26.74400 -24.19074 -23.95668 -23.26868 -21.96035 -20.67592 -19.82085 -19.54165 -19.28905 -19.18686 -18.64585 -17.88631 -17.59065 -17.16689 -16.92253 -16.61579 -16.49580 -16.24674 -15.90518 -15.70577 -15.65505 -15.59886 -15.28698 -15.15047 -15.04174 -14.99197 -14.87608 -14.81325 -14.44487 -14.34256 -14.19795 -13.85320 -13.72607 -13.30534 -13.15424 -12.86946 -12.73309 -12.64879 -12.37367 -12.33081 -12.14586 -12.05129 -11.96599 -11.69513 -11.68696 -11.55126 -10.79945 -10.50608 -10.30011 -9.95751 -4.99033 -0.67330 -0.02837 0.91039 1.24036 1.26267 1.44942 1.54612 1.69884 2.02698 2.09516 2.41116 2.57732 2.64067 2.89877 3.17092 3.31341 3.37786 3.46126 3.53308 3.58690 3.67017 3.79407 3.94946 4.02064 4.18685 4.21999 4.24769 4.28555 4.37507 4.44023 4.49516 4.54285 4.57007 4.63160 4.71634 4.77692 4.84596 4.86586 4.97432 5.03395 5.06614 5.28468 5.45036 5.71025 6.54224 6.77262 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.005 3.995 2 O -0.349 6.349 3 C 0.029 3.971 4 C 0.433 3.567 5 F -0.186 7.186 6 F -0.189 7.189 7 F -0.174 7.174 8 C -0.136 4.136 9 C -0.089 4.089 10 H 0.131 0.869 11 C 0.075 3.925 12 O -0.338 6.338 13 C 0.514 3.486 14 O -0.534 6.534 15 C -0.121 4.121 16 C -0.059 4.059 17 C -0.042 4.042 18 Cl -0.063 7.063 19 C -0.077 4.077 20 C -0.090 4.090 21 O -0.546 6.546 22 Si 0.795 3.205 23 C -0.102 4.102 24 C -0.036 4.036 25 C -0.111 4.111 26 H 0.106 0.894 27 H 0.048 0.952 28 H 0.069 0.931 29 H 0.129 0.871 30 H 0.101 0.899 31 H 0.078 0.922 32 H 0.078 0.922 33 H 0.137 0.863 34 H 0.102 0.898 35 H 0.397 0.603 36 H -0.280 1.280 37 H -0.299 1.299 38 H 0.186 0.814 39 H 0.182 0.818 40 H 0.091 0.909 41 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.722 7.836 -1.105 8.368 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 O -0.267 6.267 3 C -0.014 4.014 4 C 0.378 3.622 5 F -0.167 7.167 6 F -0.171 7.171 7 F -0.155 7.155 8 C -0.173 4.173 9 C -0.107 4.107 10 H 0.149 0.851 11 C 0.002 3.998 12 O -0.254 6.254 13 C 0.360 3.640 14 O -0.425 6.425 15 C -0.122 4.122 16 C -0.078 4.078 17 C -0.069 4.069 18 Cl -0.034 7.034 19 C -0.078 4.078 20 C -0.198 4.198 21 O -0.354 6.354 22 Si 0.699 3.301 23 C -0.119 4.119 24 C -0.054 4.054 25 C -0.148 4.148 26 H 0.125 0.875 27 H 0.067 0.933 28 H 0.088 0.912 29 H 0.148 0.852 30 H 0.119 0.881 31 H 0.097 0.903 32 H 0.096 0.904 33 H 0.155 0.845 34 H 0.119 0.881 35 H 0.247 0.753 36 H -0.206 1.206 37 H -0.227 1.227 38 H 0.202 0.798 39 H 0.199 0.801 40 H 0.110 0.890 41 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 3.281 6.665 -0.777 7.470 hybrid contribution -1.416 -1.120 0.396 1.849 sum 1.865 5.545 -0.381 5.862 Atomic orbital electron populations 1.23255 0.78892 1.04947 1.01925 1.88078 1.21954 1.22787 1.93859 1.24313 1.01138 0.86173 0.89744 1.21521 0.74120 0.78729 0.87796 1.93175 1.37355 1.89333 1.96835 1.93190 1.95047 1.71133 1.57713 1.93173 1.68674 1.57069 1.96591 1.23662 0.99854 1.01731 0.92059 1.22037 0.98021 0.95429 0.95191 0.85094 1.23142 0.83494 0.96314 0.96848 1.86447 1.39503 1.36812 1.62654 1.21197 0.88155 0.78945 0.75723 1.90868 1.33436 1.58989 1.59204 1.19021 0.92954 0.96885 1.03390 1.21126 0.97963 0.94642 0.94040 1.20714 0.95129 0.90754 1.00265 1.98406 1.98593 1.31140 1.75252 1.20796 0.94520 0.95193 0.97313 1.25510 1.02678 1.05823 0.85799 1.86563 1.96336 1.33580 1.18879 0.93945 0.72278 0.87679 0.76193 1.21326 1.00177 0.94069 0.96359 1.21894 0.89404 0.99650 0.94440 1.23377 0.90149 1.06079 0.95185 0.87532 0.93336 0.91246 0.85243 0.88088 0.90348 0.90419 0.84534 0.88054 0.75293 1.20605 1.22673 0.79761 0.80110 0.89005 0.84962 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.43 113.37 1.18 1.17 16 2 O -0.35 -0.32 8.35 -148.98 -1.24 -1.56 16 3 C 0.03 -0.07 0.85 -10.27 -0.01 -0.08 16 4 C 0.43 0.49 2.51 71.98 0.18 0.67 16 5 F -0.19 -0.38 15.24 44.97 0.69 0.31 16 6 F -0.19 -1.08 17.09 44.97 0.77 -0.31 16 7 F -0.17 -0.05 15.83 44.97 0.71 0.66 16 8 C -0.14 1.02 6.52 31.12 0.20 1.23 16 9 C -0.09 0.68 4.21 -10.27 -0.04 0.63 16 10 H 0.13 -1.50 8.14 -2.39 -0.02 -1.52 16 11 C 0.08 -0.18 5.06 71.98 0.36 0.18 16 12 O -0.34 0.41 9.47 -56.23 -0.53 -0.12 16 13 C 0.51 1.75 7.90 70.33 0.56 2.31 16 14 O -0.53 -5.55 16.14 19.96 0.32 -5.23 16 15 C -0.12 0.00 5.87 -20.10 -0.12 -0.12 16 16 C -0.06 -0.17 9.38 22.56 0.21 0.04 16 17 C -0.04 -0.09 6.31 22.29 0.14 0.05 16 18 Cl -0.06 -0.34 27.57 -2.72 -0.07 -0.41 16 19 C -0.08 0.21 5.27 -19.78 -0.10 0.11 16 20 C -0.09 0.23 2.09 71.24 0.15 0.37 16 21 O -0.55 0.86 12.85 -148.98 -1.91 -1.05 16 22 Si 0.80 -5.02 29.91 68.60 2.05 -2.96 16 23 C -0.10 0.87 8.64 22.23 0.19 1.06 16 24 C -0.04 0.25 9.62 22.54 0.22 0.47 16 25 C -0.11 0.64 6.89 31.12 0.21 0.86 16 26 H 0.11 -0.37 8.14 -2.38 -0.02 -0.39 16 27 H 0.05 -0.05 6.25 -2.39 -0.01 -0.06 16 28 H 0.07 -0.37 6.76 -2.39 -0.02 -0.39 16 29 H 0.13 -1.33 8.07 -2.39 -0.02 -1.35 16 30 H 0.10 -0.84 6.71 -2.39 -0.02 -0.86 16 31 H 0.08 -0.19 8.14 -2.39 -0.02 -0.21 16 32 H 0.08 0.11 6.12 -2.39 -0.01 0.09 16 33 H 0.14 0.68 7.65 -2.91 -0.02 0.66 16 34 H 0.10 0.10 7.36 -2.39 -0.02 0.08 16 35 H 0.40 -4.28 8.70 -74.06 -0.64 -4.92 16 36 H -0.28 0.44 7.11 99.48 0.71 1.15 16 37 H -0.30 -0.65 7.11 99.48 0.71 0.06 16 38 H 0.19 -2.99 5.12 -2.91 -0.01 -3.00 16 39 H 0.18 -2.31 7.61 -2.91 -0.02 -2.34 16 40 H 0.09 -0.37 8.10 -2.38 -0.02 -0.39 16 41 H 0.13 -1.15 7.01 -2.39 -0.02 -1.16 16 Total: 0.00 -20.91 368.06 4.63 -16.28 By element: Atomic # 1 Polarization: -15.07 SS G_CDS: 0.52 Total: -14.56 kcal Atomic # 6 Polarization: 5.62 SS G_CDS: 3.34 Total: 8.95 kcal Atomic # 8 Polarization: -4.60 SS G_CDS: -3.37 Total: -7.97 kcal Atomic # 9 Polarization: -1.50 SS G_CDS: 2.17 Total: 0.66 kcal Atomic # 14 Polarization: -5.02 SS G_CDS: 2.05 Total: -2.96 kcal Atomic # 17 Polarization: -0.34 SS G_CDS: -0.07 Total: -0.41 kcal Total: -20.91 4.63 -16.28 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_8687484_17321610.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -230.807 kcal (2) G-P(sol) polarization free energy of solvation -20.912 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -251.719 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.627 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.285 kcal (6) G-S(sol) free energy of system = (1) + (5) -247.092 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds