Wall clock time and date at job start Sat Mar 6 2021 09:56:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.37846 * 125.89470 * 2 1 4 4 C 1.47104 * 127.02620 * 359.97438 * 3 2 1 5 5 O 1.21555 * 119.99808 * 0.02562 * 4 3 2 6 6 O 1.34784 * 120.00333 * 180.02562 * 4 3 2 7 7 C 1.45198 * 116.99999 * 180.02562 * 6 4 3 8 8 C 1.53004 * 109.46571 * 179.97438 * 7 6 4 9 9 H 1.08991 * 112.85333 * 316.18976 * 8 7 6 10 10 C 1.53782 * 113.61521 * 87.50238 * 8 7 6 11 11 C 1.53782 * 87.08320 * 139.97646 * 10 8 7 12 12 H 1.09001 * 113.61717 * 89.11318 * 11 10 8 13 13 N 1.46497 * 113.61404 * 220.01790 * 11 10 8 14 14 C 1.34778 * 119.99741 * 252.49570 * 13 11 10 15 15 O 1.21502 * 120.00335 * 0.02562 * 14 13 11 16 16 O 1.34644 * 119.99561 * 180.02562 * 14 13 11 17 17 C 1.45205 * 116.99694 * 179.97438 * 16 14 13 18 18 C 1.53000 * 109.46920 * 59.99813 * 17 16 14 19 19 C 1.52994 * 109.47118 * 180.02562 * 17 16 14 20 20 C 1.53004 * 109.46881 * 300.00216 * 17 16 14 21 21 C 1.53778 * 87.08162 * 334.56659 * 11 10 8 22 22 C 1.46742 * 105.94813 * 180.02562 * 3 2 1 23 23 C 1.34434 * 106.37807 * 359.73670 * 22 3 2 24 24 C 1.50693 * 125.45881 * 180.27378 * 23 22 3 25 25 O 1.42904 * 109.46767 * 120.17134 * 24 23 22 26 26 Si 1.86298 * 109.47466 * 0.17630 * 24 23 22 27 27 N 1.34629 * 125.89681 * 180.02562 * 2 1 3 28 28 H 1.09001 * 109.47402 * 270.00338 * 1 2 3 29 29 H 1.09004 * 109.47234 * 30.00516 * 1 2 3 30 30 H 1.09002 * 109.46979 * 149.99941 * 1 2 3 31 31 H 1.09003 * 109.46952 * 299.99211 * 7 6 4 32 32 H 1.08997 * 109.47769 * 59.99906 * 7 6 4 33 33 H 1.08998 * 113.61287 * 254.52483 * 10 8 7 34 34 H 1.08996 * 113.61416 * 25.42490 * 10 8 7 35 35 H 0.96998 * 120.00243 * 72.49916 * 13 11 10 36 36 H 1.08998 * 109.47015 * 60.00227 * 18 17 16 37 37 H 1.09003 * 109.46501 * 179.97438 * 18 17 16 38 38 H 1.08996 * 109.47538 * 300.00057 * 18 17 16 39 39 H 1.09000 * 109.47645 * 59.99656 * 19 17 16 40 40 H 1.08996 * 109.47393 * 180.02562 * 19 17 16 41 41 H 1.08998 * 109.46904 * 299.99827 * 19 17 16 42 42 H 1.08996 * 109.47317 * 60.00102 * 20 17 16 43 43 H 1.09009 * 109.46979 * 180.02562 * 20 17 16 44 44 H 1.08993 * 109.47162 * 299.99719 * 20 17 16 45 45 H 1.09001 * 113.61231 * 270.88386 * 21 11 10 46 46 H 1.08999 * 113.69586 * 139.98982 * 21 11 10 47 47 H 1.08011 * 126.80932 * 179.97438 * 22 3 2 48 48 H 1.08998 * 109.47703 * 240.16737 * 24 23 22 49 49 H 0.96697 * 114.00277 * 300.00261 * 25 24 23 50 50 H 1.48497 * 110.00294 * 58.67044 * 26 24 23 51 51 H 1.48498 * 110.00550 * 179.97438 * 26 24 23 52 52 H 0.97001 * 124.80703 * 359.97264 * 27 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3152 1.1167 0.0000 4 6 1.8831 2.5229 -0.0005 5 8 0.6984 2.7946 -0.0006 6 8 2.8009 3.5099 -0.0010 7 6 2.3024 4.8736 -0.0009 8 6 3.4822 5.8478 -0.0008 9 1 4.2700 5.5585 0.6945 10 6 3.9963 6.1928 -1.4085 11 6 4.1597 7.6381 -0.9091 12 1 5.1339 7.8385 -0.4630 13 7 3.7653 8.6477 -1.8947 14 6 4.7060 9.3857 -2.5167 15 8 5.8811 9.2135 -2.2604 16 8 4.3435 10.3139 -3.4222 17 6 5.4097 11.0719 -4.0522 18 6 6.3448 10.1158 -4.7953 19 6 4.8086 12.0710 -5.0428 20 6 6.1992 11.8281 -2.9817 21 6 3.0633 7.3225 0.1220 22 6 3.6946 0.6161 -0.0006 23 6 3.6109 -0.7256 0.0050 24 6 4.7815 -1.6745 0.0124 25 8 4.7218 -2.4954 1.1807 26 14 6.3700 -0.7011 0.0181 27 7 2.2963 -1.0906 -0.0005 28 1 -0.3634 0.0001 1.0276 29 1 -0.3634 0.8900 -0.5139 30 1 -0.3633 -0.8900 -0.5139 31 1 1.6948 5.0384 -0.8908 32 1 1.6954 5.0386 0.8892 33 1 4.9399 5.7083 -1.6595 34 1 3.2423 6.0828 -2.1878 35 1 2.8272 8.7850 -2.0996 36 1 5.7824 9.5771 -5.5579 37 1 7.1450 10.6849 -5.2686 38 1 6.7730 9.4043 -4.0893 39 1 4.1426 12.7521 -4.5131 40 1 5.6090 12.6397 -5.5161 41 1 4.2460 11.5326 -5.8054 42 1 6.6274 11.1166 -2.2756 43 1 6.9994 12.3975 -3.4547 44 1 5.5331 12.5092 -2.4523 45 1 2.0542 7.5213 -0.2390 46 1 3.2523 7.7495 1.1069 47 1 4.5979 1.2082 -0.0012 48 1 4.7445 -2.3044 -0.8764 49 1 4.7503 -2.0006 2.0110 50 1 6.4183 0.1853 1.2085 51 1 7.5322 -1.6254 0.0261 52 1 1.9758 -2.0061 -0.0005 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_9864948_15734238.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 09:56:59 Heat of formation + Delta-G solvation = -136.036249 kcal Electronic energy + Delta-G solvation = -32915.333491 eV Core-core repulsion = 28269.156742 eV Total energy + Delta-G solvation = -4646.176749 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.192 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -42.51130 -41.76921 -40.97439 -40.09431 -38.00883 -37.83070 -37.01498 -35.24671 -34.14596 -33.03225 -32.34918 -29.71676 -29.02793 -28.29000 -28.24716 -26.84106 -25.93964 -24.74895 -23.63914 -22.31382 -21.61131 -21.36462 -20.78648 -20.30056 -19.31108 -18.97439 -18.10119 -17.64603 -17.30309 -17.03031 -16.99830 -16.91706 -16.58961 -16.28524 -16.11398 -15.57483 -15.45368 -15.33897 -15.22969 -14.74110 -14.48993 -14.43838 -14.14741 -13.95080 -13.94405 -13.60428 -13.54180 -13.50247 -13.37889 -13.12485 -13.06585 -12.93473 -12.79262 -12.78401 -12.44323 -12.33548 -12.28315 -12.15385 -11.93170 -11.88955 -11.72272 -11.25301 -11.23718 -11.18921 -10.93516 -10.90386 -10.09305 -10.01240 -9.27489 -4.97513 0.50021 1.04780 1.19492 1.24912 1.59387 1.70062 1.88794 1.93519 2.29098 2.33611 3.17800 3.21089 3.33762 3.39557 3.48225 3.69156 3.70607 3.75607 3.82020 3.87534 4.01340 4.03744 4.09267 4.20695 4.28433 4.32545 4.38321 4.49794 4.55217 4.56796 4.59716 4.61658 4.64622 4.66767 4.71100 4.78177 4.81897 4.87139 4.89609 4.92493 4.97252 4.99355 5.05411 5.11814 5.17260 5.39465 5.40692 5.53045 5.55096 5.62439 5.65494 5.81021 6.23417 6.27107 6.47686 7.04956 7.48370 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.101 4.101 2 C 0.130 3.870 3 C -0.227 4.227 4 C 0.543 3.457 5 O -0.521 6.521 6 O -0.349 6.349 7 C 0.081 3.919 8 C -0.108 4.108 9 H 0.110 0.890 10 C -0.147 4.147 11 C 0.140 3.860 12 H 0.123 0.877 13 N -0.702 5.702 14 C 0.650 3.350 15 O -0.566 6.566 16 O -0.366 6.366 17 C 0.137 3.863 18 C -0.184 4.184 19 C -0.142 4.142 20 C -0.184 4.184 21 C -0.136 4.136 22 C -0.131 4.131 23 C -0.021 4.021 24 C -0.055 4.055 25 O -0.535 6.535 26 Si 0.711 3.289 27 N -0.530 5.530 28 H 0.084 0.916 29 H 0.103 0.897 30 H 0.071 0.929 31 H 0.072 0.928 32 H 0.073 0.927 33 H 0.081 0.919 34 H 0.089 0.911 35 H 0.406 0.594 36 H 0.060 0.940 37 H 0.071 0.929 38 H 0.088 0.912 39 H 0.067 0.933 40 H 0.082 0.918 41 H 0.067 0.933 42 H 0.087 0.913 43 H 0.071 0.929 44 H 0.059 0.941 45 H 0.093 0.907 46 H 0.085 0.915 47 H 0.158 0.842 48 H 0.119 0.881 49 H 0.380 0.620 50 H -0.253 1.253 51 H -0.254 1.254 52 H 0.422 0.578 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.100 -0.168 -1.356 1.754 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.159 4.159 2 C 0.009 3.991 3 C -0.235 4.235 4 C 0.390 3.610 5 O -0.411 6.411 6 O -0.266 6.266 7 C 0.007 3.993 8 C -0.127 4.127 9 H 0.128 0.872 10 C -0.186 4.186 11 C 0.037 3.963 12 H 0.140 0.860 13 N -0.360 5.360 14 C 0.404 3.596 15 O -0.455 6.455 16 O -0.281 6.281 17 C 0.100 3.900 18 C -0.241 4.241 19 C -0.199 4.199 20 C -0.241 4.241 21 C -0.175 4.175 22 C -0.154 4.154 23 C -0.130 4.130 24 C -0.165 4.165 25 O -0.342 6.342 26 Si 0.610 3.390 27 N -0.125 5.125 28 H 0.102 0.898 29 H 0.121 0.879 30 H 0.089 0.911 31 H 0.091 0.909 32 H 0.091 0.909 33 H 0.100 0.900 34 H 0.107 0.893 35 H 0.242 0.758 36 H 0.079 0.921 37 H 0.090 0.910 38 H 0.106 0.894 39 H 0.086 0.914 40 H 0.100 0.900 41 H 0.086 0.914 42 H 0.106 0.894 43 H 0.090 0.910 44 H 0.078 0.922 45 H 0.111 0.889 46 H 0.104 0.896 47 H 0.175 0.825 48 H 0.137 0.863 49 H 0.228 0.772 50 H -0.178 1.178 51 H -0.179 1.179 52 H 0.260 0.740 Dipole moment (debyes) X Y Z Total from point charges -0.088 -0.486 -1.309 1.399 hybrid contribution -1.192 -0.589 0.932 1.623 sum -1.280 -1.075 -0.377 1.714 Atomic orbital electron populations 1.20682 0.86312 1.04798 1.04059 1.20697 0.93760 0.85230 0.99363 1.19254 0.93313 0.88844 1.22063 1.19987 0.83509 0.85261 0.72222 1.90823 1.18053 1.84568 1.47702 1.86551 1.39519 1.16071 1.84421 1.23017 0.96048 0.77414 1.02778 1.22377 0.98185 0.92980 0.99122 0.87201 1.23625 1.02872 0.95538 0.96523 1.22524 0.99882 0.85687 0.88250 0.85957 1.44763 1.09084 1.38828 1.43332 1.18169 0.84691 0.78442 0.78305 1.90910 1.16583 1.70916 1.67089 1.86311 1.40907 1.48087 1.52752 1.22110 0.85292 0.90317 0.92275 1.22520 0.99678 1.00643 1.01266 1.21876 1.02016 0.97913 0.98110 1.22522 1.00638 1.01240 0.99712 1.23402 0.99492 0.94358 1.00212 1.21858 0.96334 0.92139 1.05082 1.20780 0.84896 0.94914 1.12390 1.24822 1.02828 0.97702 0.91112 1.86590 1.95615 1.36025 1.15932 0.94341 0.74040 0.80829 0.89784 1.41544 1.05556 1.08788 1.56657 0.89789 0.87853 0.91054 0.90920 0.90887 0.90005 0.89294 0.75834 0.92132 0.90975 0.89373 0.91416 0.89958 0.91412 0.89412 0.90963 0.92153 0.88901 0.89616 0.82470 0.86306 0.77221 1.17754 1.17908 0.74037 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.07 9.90 36.00 0.36 0.43 16 2 C 0.13 0.09 7.22 -81.51 -0.59 -0.50 16 3 C -0.23 -0.50 6.33 -103.01 -0.65 -1.15 16 4 C 0.54 1.84 7.95 34.33 0.27 2.12 16 5 O -0.52 -2.66 14.67 -19.31 -0.28 -2.94 16 6 O -0.35 -0.72 10.12 -40.72 -0.41 -1.13 16 7 C 0.08 -0.01 5.31 37.16 0.20 0.19 16 8 C -0.11 0.20 4.02 -89.80 -0.36 -0.16 16 9 H 0.11 -0.21 8.14 -51.93 -0.42 -0.64 16 10 C -0.15 0.19 7.43 -25.92 -0.19 0.00 16 11 C 0.14 -0.15 4.24 -67.12 -0.28 -0.43 16 12 H 0.12 0.02 7.47 -51.93 -0.39 -0.36 16 13 N -0.70 0.10 5.36 -57.93 -0.31 -0.22 16 14 C 0.65 1.84 8.06 54.06 0.44 2.27 16 15 O -0.57 -2.87 11.48 -19.27 -0.22 -3.09 16 16 O -0.37 -0.93 9.94 -40.33 -0.40 -1.33 16 17 C 0.14 0.20 1.13 -90.62 -0.10 0.09 16 18 C -0.18 -0.26 8.37 37.16 0.31 0.05 16 19 C -0.14 0.08 8.85 37.15 0.33 0.41 16 20 C -0.18 -0.26 8.37 37.16 0.31 0.05 16 21 C -0.14 0.38 7.39 -25.92 -0.19 0.19 16 22 C -0.13 -0.07 9.47 -37.49 -0.35 -0.43 16 23 C -0.02 0.01 6.47 -81.89 -0.53 -0.52 16 24 C -0.06 0.08 3.08 36.00 0.11 0.19 16 25 O -0.54 0.07 12.88 -35.23 -0.45 -0.39 16 26 Si 0.71 -1.25 30.55 -169.99 -5.19 -6.44 16 27 N -0.53 0.45 5.89 -5.20 -0.03 0.41 16 28 H 0.08 -0.09 8.14 -51.93 -0.42 -0.52 16 29 H 0.10 0.09 6.51 -51.93 -0.34 -0.25 16 30 H 0.07 -0.19 8.14 -51.93 -0.42 -0.62 16 31 H 0.07 -0.01 7.84 -51.93 -0.41 -0.42 16 32 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 33 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 34 H 0.09 -0.12 7.90 -51.93 -0.41 -0.53 16 35 H 0.41 -0.86 8.84 -40.82 -0.36 -1.22 16 36 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 37 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 38 H 0.09 0.31 5.88 -51.93 -0.31 0.00 16 39 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 40 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 41 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 42 H 0.09 0.30 5.88 -51.93 -0.31 0.00 16 43 H 0.07 0.00 8.14 -51.92 -0.42 -0.42 16 44 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 45 H 0.09 -0.33 8.08 -51.93 -0.42 -0.75 16 46 H 0.09 -0.27 8.14 -51.93 -0.42 -0.69 16 47 H 0.16 -0.14 6.20 -52.48 -0.33 -0.47 16 48 H 0.12 -0.28 7.96 -51.93 -0.41 -0.69 16 49 H 0.38 -0.97 8.70 45.56 0.40 -0.58 16 50 H -0.25 -0.10 7.11 56.52 0.40 0.31 16 51 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 52 H 0.42 -1.25 8.96 -40.82 -0.37 -1.61 16 LS Contribution 424.75 15.07 6.40 6.40 Total: 0.00 -8.67 424.75 -10.17 -18.85 By element: Atomic # 1 Polarization: -4.58 SS G_CDS: -8.34 Total: -12.92 kcal Atomic # 6 Polarization: 3.72 SS G_CDS: -0.93 Total: 2.79 kcal Atomic # 7 Polarization: 0.54 SS G_CDS: -0.34 Total: 0.20 kcal Atomic # 8 Polarization: -7.11 SS G_CDS: -1.77 Total: -8.88 kcal Atomic # 14 Polarization: -1.25 SS G_CDS: -5.19 Total: -6.44 kcal Total LS contribution 6.40 Total: 6.40 kcal Total: -8.67 -10.17 -18.85 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_9864948_15734238.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -117.190 kcal (2) G-P(sol) polarization free energy of solvation -8.673 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.864 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.173 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.846 kcal (6) G-S(sol) free energy of system = (1) + (5) -136.036 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds