Wall clock time and date at job start Sat Mar 6 2021 10:17:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.37846 * 125.89447 * 2 1 4 4 C 1.47111 * 127.02441 * 359.97078 * 3 2 1 5 5 O 1.21552 * 119.99904 * 359.97438 * 4 3 2 6 6 O 1.34787 * 119.99919 * 179.97438 * 4 3 2 7 7 C 1.45200 * 116.99980 * 179.97438 * 6 4 3 8 8 C 1.53001 * 109.47111 * 179.97438 * 7 6 4 9 9 H 1.08992 * 109.47514 * 305.00709 * 8 7 6 10 10 C 1.53002 * 109.46637 * 65.00579 * 8 7 6 11 11 C 1.52997 * 109.46817 * 179.97438 * 10 8 7 12 12 C 1.53005 * 109.47452 * 300.00239 * 11 10 8 13 13 H 1.09002 * 109.46935 * 300.00125 * 12 11 10 14 14 O 1.42900 * 109.47304 * 180.02562 * 12 11 10 15 15 C 1.52999 * 109.47159 * 59.99536 * 12 11 10 16 16 C 1.52997 * 109.47317 * 300.00546 * 15 12 11 17 17 C 1.46744 * 105.95081 * 180.22608 * 3 2 1 18 18 C 1.34433 * 106.37452 * 359.57019 * 17 3 2 19 19 C 1.50700 * 125.45697 * 180.14641 * 18 17 3 20 20 O 1.42895 * 109.46938 * 245.33700 * 19 18 17 21 21 Si 1.86298 * 109.47297 * 5.33777 * 19 18 17 22 22 N 1.34619 * 125.89983 * 179.97438 * 2 1 3 23 23 H 1.08998 * 109.46884 * 89.99675 * 1 2 3 24 24 H 1.09002 * 109.46698 * 210.00235 * 1 2 3 25 25 H 1.09002 * 109.47104 * 329.99562 * 1 2 3 26 26 H 1.09008 * 109.46784 * 60.00349 * 7 6 4 27 27 H 1.09000 * 109.47295 * 300.00601 * 7 6 4 28 28 H 1.08993 * 109.47662 * 299.99908 * 10 8 7 29 29 H 1.09002 * 109.47075 * 60.00414 * 10 8 7 30 30 H 1.09002 * 109.47153 * 60.00231 * 11 10 8 31 31 H 1.09001 * 109.47289 * 180.02562 * 11 10 8 32 32 H 0.96700 * 113.99696 * 179.97438 * 14 12 11 33 33 H 1.08996 * 109.46929 * 179.97438 * 15 12 11 34 34 H 1.09002 * 109.46716 * 60.00455 * 15 12 11 35 35 H 1.09002 * 109.47153 * 299.99641 * 16 15 12 36 36 H 1.09001 * 109.46832 * 179.97438 * 16 15 12 37 37 H 1.07999 * 126.81032 * 179.71846 * 17 3 2 38 38 H 1.08998 * 109.46904 * 125.33998 * 19 18 17 39 39 H 0.96701 * 114.00042 * 180.02562 * 20 19 18 40 40 H 1.48505 * 110.00078 * 300.00085 * 21 19 18 41 41 H 1.48501 * 110.00034 * 61.31894 * 21 19 18 42 42 H 0.97003 * 124.81193 * 0.03005 * 22 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3152 1.1167 0.0000 4 6 1.8831 2.5229 -0.0006 5 8 0.6983 2.7946 -0.0016 6 8 2.8010 3.5100 0.0000 7 6 2.3024 4.8737 -0.0012 8 6 3.4821 5.8480 0.0003 9 1 4.1364 5.6251 0.8431 10 6 4.2655 5.7023 -1.3058 11 6 5.4448 6.6769 -1.3046 12 6 4.9224 8.1097 -1.1803 13 1 4.2680 8.3322 -2.0231 14 8 6.0238 9.0200 -1.1797 15 6 4.1389 8.2553 0.1258 16 6 2.9596 7.2806 0.1246 17 6 3.6946 0.6162 -0.0056 18 6 3.6110 -0.7256 0.0013 19 6 4.7817 -1.6744 0.0022 20 8 4.7938 -2.4171 -1.2186 21 14 6.3659 -0.7061 0.1557 22 7 2.2964 -1.0905 0.0005 23 1 -0.3633 0.0001 -1.0277 24 1 -0.3633 -0.8900 0.5139 25 1 -0.3633 0.8900 0.5139 26 1 1.6941 5.0389 0.8881 27 1 1.6960 5.0381 -0.8919 28 1 4.6374 4.6816 -1.3946 29 1 3.6112 5.9253 -2.1487 30 1 6.0992 6.4544 -0.4617 31 1 6.0027 6.5735 -2.2353 32 1 5.7662 9.9490 -1.1039 33 1 3.7671 9.2760 0.2146 34 1 4.7933 8.0328 0.9687 35 1 2.3052 7.5031 -0.7183 36 1 2.4018 7.3841 1.0553 37 1 4.5978 1.2082 -0.0113 38 1 4.6924 -2.3609 0.8441 39 1 5.5222 -3.0494 -1.2871 40 1 6.4995 0.2336 -0.9864 41 1 6.3794 0.0457 1.4363 42 1 1.9760 -2.0061 0.0005 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_9864948_16737258.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 10:17:15 Heat of formation + Delta-G solvation = -142.678174 kcal Electronic energy + Delta-G solvation = -24139.034035 eV Core-core repulsion = 20471.516371 eV Total energy + Delta-G solvation = -3667.517664 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.150 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -42.48962 -40.95697 -39.92540 -37.85826 -37.45581 -36.40247 -33.10349 -32.50013 -31.90030 -31.61600 -29.21956 -26.96906 -25.48809 -23.97863 -23.48865 -22.19900 -21.59323 -20.98263 -20.46569 -18.68299 -18.56580 -18.18962 -17.55306 -17.25919 -16.91563 -16.32445 -15.98076 -15.53801 -15.45496 -15.28459 -15.01985 -14.91589 -14.74412 -14.16902 -14.02792 -13.84971 -13.68230 -13.57090 -13.48706 -13.26741 -13.05175 -13.00973 -12.51937 -12.35151 -12.11892 -12.01326 -11.78538 -11.77196 -11.37954 -11.22972 -11.08956 -10.72330 -10.57272 -10.00905 -9.25597 -5.06455 0.50732 1.03893 1.15429 1.65384 1.72217 1.98029 2.26078 2.33532 3.17079 3.20169 3.58477 3.66265 3.68972 3.73082 3.79911 3.98348 4.00796 4.07986 4.17066 4.21619 4.25502 4.35019 4.39506 4.42688 4.47569 4.53858 4.57593 4.58512 4.69764 4.78537 4.88006 4.91666 5.02784 5.03888 5.09531 5.13225 5.20689 5.30593 5.40880 5.53413 5.64784 5.81595 6.27033 6.44197 6.71705 7.05774 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.100 4.100 2 C 0.131 3.869 3 C -0.225 4.225 4 C 0.544 3.456 5 O -0.519 6.519 6 O -0.351 6.351 7 C 0.073 3.927 8 C -0.089 4.089 9 H 0.085 0.915 10 C -0.112 4.112 11 C -0.113 4.113 12 C 0.103 3.897 13 H 0.055 0.945 14 O -0.569 6.569 15 C -0.150 4.150 16 C -0.110 4.110 17 C -0.139 4.139 18 C 0.025 3.975 19 C -0.053 4.053 20 O -0.550 6.550 21 Si 0.711 3.289 22 N -0.528 5.528 23 H 0.085 0.915 24 H 0.071 0.929 25 H 0.103 0.897 26 H 0.071 0.929 27 H 0.072 0.928 28 H 0.077 0.923 29 H 0.065 0.935 30 H 0.071 0.929 31 H 0.071 0.929 32 H 0.378 0.622 33 H 0.068 0.932 34 H 0.073 0.927 35 H 0.069 0.931 36 H 0.071 0.929 37 H 0.150 0.850 38 H 0.074 0.926 39 H 0.386 0.614 40 H -0.246 1.246 41 H -0.251 1.251 42 H 0.422 0.578 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.733 -3.725 1.224 4.286 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.157 4.157 2 C 0.011 3.989 3 C -0.233 4.233 4 C 0.391 3.609 5 O -0.410 6.410 6 O -0.268 6.268 7 C -0.001 4.001 8 C -0.108 4.108 9 H 0.103 0.897 10 C -0.149 4.149 11 C -0.150 4.150 12 C 0.044 3.956 13 H 0.073 0.927 14 O -0.374 6.374 15 C -0.187 4.187 16 C -0.148 4.148 17 C -0.162 4.162 18 C -0.084 4.084 19 C -0.163 4.163 20 O -0.357 6.357 21 Si 0.610 3.390 22 N -0.124 5.124 23 H 0.104 0.896 24 H 0.090 0.910 25 H 0.121 0.879 26 H 0.090 0.910 27 H 0.090 0.910 28 H 0.096 0.904 29 H 0.084 0.916 30 H 0.089 0.911 31 H 0.090 0.910 32 H 0.225 0.775 33 H 0.087 0.913 34 H 0.092 0.908 35 H 0.087 0.913 36 H 0.090 0.910 37 H 0.167 0.833 38 H 0.092 0.908 39 H 0.235 0.765 40 H -0.170 1.170 41 H -0.175 1.175 42 H 0.260 0.740 Dipole moment (debyes) X Y Z Total from point charges 1.565 -3.144 1.131 3.690 hybrid contribution -1.229 0.075 0.170 1.243 sum 0.336 -3.069 1.301 3.350 Atomic orbital electron populations 1.20685 0.86077 1.04792 1.04178 1.20684 0.93789 0.85101 0.99327 1.19220 0.92987 0.89014 1.22089 1.19954 0.83530 0.85197 0.72266 1.90816 1.17948 1.84546 1.47658 1.86536 1.39591 1.16209 1.84420 1.23114 0.96637 0.77510 1.02790 1.21262 0.96178 0.93422 0.99889 0.89676 1.21553 0.96662 0.99970 0.96757 1.21483 0.98121 0.92157 1.03277 1.21857 0.87471 0.90309 0.95978 0.92693 1.86529 1.34254 1.19767 1.96897 1.22241 0.97591 0.99652 0.99249 1.21450 0.97714 0.92788 1.02852 1.21717 0.96235 0.92198 1.06053 1.19632 0.83699 0.93697 1.11379 1.24431 1.03751 0.98435 0.89709 1.86489 1.54906 1.57236 1.37044 0.95212 0.80383 0.82226 0.81202 1.41518 1.05406 1.08833 1.56602 0.89632 0.90982 0.87856 0.91020 0.91014 0.90412 0.91608 0.91061 0.91019 0.77469 0.91310 0.90842 0.91255 0.91030 0.83273 0.90765 0.76549 1.17027 1.17544 0.73977 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.03 9.90 36.01 0.36 0.32 16 2 C 0.13 0.31 7.22 -81.51 -0.59 -0.28 16 3 C -0.23 -1.00 6.33 -103.01 -0.65 -1.65 16 4 C 0.54 2.88 7.95 34.33 0.27 3.15 16 5 O -0.52 -3.43 14.67 -19.31 -0.28 -3.72 16 6 O -0.35 -1.45 9.67 -40.73 -0.39 -1.84 16 7 C 0.07 0.14 4.85 37.16 0.18 0.32 16 8 C -0.09 -0.03 2.44 -90.62 -0.22 -0.25 16 9 H 0.08 0.07 8.14 -51.93 -0.42 -0.36 16 10 C -0.11 -0.07 5.10 -26.73 -0.14 -0.21 16 11 C -0.11 -0.12 5.57 -26.73 -0.15 -0.27 16 12 C 0.10 0.05 3.47 -26.73 -0.09 -0.04 16 13 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 14 O -0.57 -0.91 13.32 -35.23 -0.47 -1.38 16 15 C -0.15 0.09 5.55 -26.73 -0.15 -0.05 16 16 C -0.11 0.09 5.20 -26.73 -0.14 -0.05 16 17 C -0.14 -0.51 9.47 -37.49 -0.36 -0.86 16 18 C 0.02 0.05 6.50 -81.89 -0.53 -0.48 16 19 C -0.05 0.05 3.07 36.01 0.11 0.16 16 20 O -0.55 0.50 12.86 -35.23 -0.45 0.04 16 21 Si 0.71 -1.16 30.57 -169.99 -5.20 -6.36 16 22 N -0.53 -0.49 5.89 -5.20 -0.03 -0.52 16 23 H 0.09 -0.01 8.14 -51.93 -0.42 -0.43 16 24 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 25 H 0.10 0.19 6.51 -51.93 -0.34 -0.14 16 26 H 0.07 0.12 8.14 -51.92 -0.42 -0.30 16 27 H 0.07 0.13 8.14 -51.93 -0.42 -0.29 16 28 H 0.08 0.12 7.82 -51.93 -0.41 -0.29 16 29 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 30 H 0.07 0.12 8.14 -51.93 -0.42 -0.30 16 31 H 0.07 0.11 8.14 -51.93 -0.42 -0.32 16 32 H 0.38 -0.90 9.08 45.56 0.41 -0.49 16 33 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 34 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 35 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 36 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 37 H 0.15 0.48 6.23 -52.49 -0.33 0.15 16 38 H 0.07 -0.22 7.96 -51.93 -0.41 -0.63 16 39 H 0.39 -2.31 8.74 45.56 0.40 -1.91 16 40 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 41 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 42 H 0.42 -0.78 8.96 -40.82 -0.37 -1.15 16 LS Contribution 344.94 15.07 5.20 5.20 Total: 0.00 -9.02 344.94 -9.45 -18.47 By element: Atomic # 1 Polarization: -3.96 SS G_CDS: -5.73 Total: -9.69 kcal Atomic # 6 Polarization: 1.90 SS G_CDS: -2.09 Total: -0.20 kcal Atomic # 7 Polarization: -0.49 SS G_CDS: -0.03 Total: -0.52 kcal Atomic # 8 Polarization: -5.30 SS G_CDS: -1.60 Total: -6.90 kcal Atomic # 14 Polarization: -1.16 SS G_CDS: -5.20 Total: -6.36 kcal Total LS contribution 5.20 Total: 5.20 kcal Total: -9.02 -9.45 -18.47 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_9864948_16737258.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -124.209 kcal (2) G-P(sol) polarization free energy of solvation -9.018 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -133.226 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.452 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.469 kcal (6) G-S(sol) free energy of system = (1) + (5) -142.678 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds