Wall clock time and date at job start Sat Mar 6 2021 11:29:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42906 * 1 3 3 C 1.42897 * 113.99826 * 2 1 4 4 H 1.08997 * 112.85102 * 341.19475 * 3 2 1 5 5 C 1.53789 * 113.61310 * 112.50476 * 3 2 1 6 6 C 1.53782 * 87.07873 * 139.97652 * 5 3 2 7 7 H 1.08998 * 113.61421 * 89.11831 * 6 5 3 8 8 N 1.46500 * 113.68929 * 220.00708 * 6 5 3 9 9 C 1.46500 * 120.00052 * 43.65564 * 8 6 5 10 10 C 1.34780 * 119.99702 * 223.65757 * 8 6 5 11 11 O 1.21278 * 120.00313 * 359.97438 * 10 8 6 12 12 C 1.50704 * 119.99745 * 179.97438 * 10 8 6 13 13 C 1.52993 * 109.47007 * 180.02562 * 12 10 8 14 14 O 1.42904 * 109.47374 * 180.02562 * 13 12 10 15 15 C 1.35901 * 117.00261 * 179.97438 * 14 13 12 16 16 C 1.38714 * 120.05320 * 179.97438 * 15 14 13 17 17 C 1.38159 * 119.94099 * 180.02562 * 16 15 14 18 18 C 1.50705 * 119.97135 * 180.02562 * 17 16 15 19 19 O 1.42897 * 109.46610 * 299.99360 * 18 17 16 20 20 Si 1.86301 * 109.47028 * 179.97438 * 18 17 16 21 21 C 1.38252 * 120.05970 * 359.97438 * 17 16 15 22 22 C 1.38290 * 120.10483 * 359.97438 * 21 17 16 23 23 C 1.38120 * 120.05788 * 359.76630 * 22 21 17 24 24 C 1.53779 * 87.08279 * 334.56805 * 6 5 3 25 25 H 1.08999 * 109.46938 * 59.99582 * 1 2 3 26 26 H 1.09006 * 109.47221 * 300.00163 * 1 2 3 27 27 H 1.08998 * 109.47323 * 180.02562 * 1 2 3 28 28 H 1.08997 * 113.60857 * 254.52435 * 5 3 2 29 29 H 1.08998 * 113.61172 * 25.42996 * 5 3 2 30 30 H 1.08993 * 109.46962 * 94.23601 * 9 8 6 31 31 H 1.09005 * 109.46848 * 214.23412 * 9 8 6 32 32 H 1.08995 * 109.46831 * 334.23219 * 9 8 6 33 33 H 1.09008 * 109.46758 * 299.99999 * 12 10 8 34 34 H 1.08999 * 109.47137 * 59.99895 * 12 10 8 35 35 H 1.09008 * 109.47135 * 299.99492 * 13 12 10 36 36 H 1.08999 * 109.47483 * 59.99831 * 13 12 10 37 37 H 1.07997 * 120.02879 * 0.02562 * 16 15 14 38 38 H 1.08997 * 109.47175 * 59.99277 * 18 17 16 39 39 H 0.96701 * 114.00324 * 299.99894 * 19 18 17 40 40 H 1.48498 * 110.00129 * 58.67947 * 20 18 17 41 41 H 1.48496 * 109.99971 * 179.97438 * 20 18 17 42 42 H 1.07990 * 119.94440 * 180.02562 * 21 17 16 43 43 H 1.08002 * 119.96437 * 180.02562 * 22 21 17 44 44 H 1.08001 * 120.02620 * 180.27557 * 23 22 21 45 45 H 1.08999 * 113.61307 * 270.88466 * 24 6 5 46 46 H 1.09002 * 113.61647 * 139.98469 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3138 2.0788 -0.3238 5 6 2.7535 1.6488 1.3018 6 6 3.8228 2.3180 0.4222 7 1 3.6223 3.3692 0.2149 8 7 5.1942 2.0797 0.8790 9 6 5.6007 0.7394 1.3085 10 6 6.0818 3.0936 0.9041 11 8 5.7454 4.2031 0.5481 12 6 7.4925 2.8486 1.3745 13 6 8.2871 4.1542 1.3053 14 8 9.6249 3.9218 1.7508 15 6 10.4689 4.9870 1.7511 16 6 11.7817 4.8329 2.1718 17 6 12.6377 5.9174 2.1716 18 6 14.0643 5.7507 2.6279 19 8 14.0809 5.2974 3.9830 20 14 14.9496 7.3855 2.5083 21 6 12.1869 7.1553 1.7523 22 6 10.8788 7.3111 1.3315 23 6 10.0207 6.2289 1.3247 24 6 3.3755 1.3718 -0.7045 25 1 -0.3633 0.5139 -0.8899 26 1 -0.3634 0.5139 0.8900 27 1 -0.3634 -1.0276 0.0005 28 1 2.2141 2.3477 1.9411 29 1 3.1167 0.7739 1.8410 30 1 6.0525 0.2105 0.4694 31 1 6.3253 0.8217 2.1187 32 1 4.7269 0.1890 1.6570 33 1 7.4750 2.4883 2.4031 34 1 7.9639 2.1016 0.7358 35 1 8.3046 4.5149 0.2768 36 1 7.8156 4.9009 1.9442 37 1 12.1345 3.8660 2.4990 38 1 14.5654 5.0192 1.9940 39 1 13.6511 5.9005 4.6048 40 1 14.2576 8.4001 3.3431 41 1 16.3574 7.2347 2.9561 42 1 12.8576 8.0016 1.7526 43 1 10.5292 8.2791 1.0040 44 1 9.0005 6.3502 0.9918 45 1 3.9088 0.4212 -0.7137 46 1 3.3384 1.8470 -1.6848 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10122440_4549614.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:29:56 Heat of formation + Delta-G solvation = -83.905157 kcal Electronic energy + Delta-G solvation = -26431.189673 eV Core-core repulsion = 22482.456838 eV Total energy + Delta-G solvation = -3948.732834 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.166 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -41.66959 -41.17558 -39.97173 -39.07023 -37.55364 -37.29806 -35.27337 -33.17374 -32.42465 -30.78824 -28.41578 -27.82544 -27.06791 -26.83917 -26.09210 -24.19996 -23.61679 -22.00261 -20.98046 -20.12105 -19.32046 -18.53769 -18.01740 -17.62854 -17.56838 -17.08947 -17.04897 -16.74624 -16.54070 -16.16026 -16.11249 -15.93775 -15.46918 -15.10869 -14.85923 -14.63811 -14.46024 -14.31073 -14.04290 -13.96320 -13.70276 -13.46921 -13.22209 -13.08622 -12.93503 -12.81680 -12.78083 -12.37420 -12.27990 -12.01770 -11.91015 -11.87659 -11.79441 -11.52899 -10.94218 -10.62845 -10.55654 -9.87534 -9.77176 -9.19924 -4.92828 0.26003 0.45735 1.29190 1.45818 1.57281 1.63312 1.97917 2.28204 2.72038 2.81584 3.31348 3.39620 3.41447 3.46549 3.63951 3.69954 3.73657 3.78229 3.80543 3.90919 3.96714 4.09166 4.20527 4.23613 4.26667 4.33226 4.36280 4.38495 4.39514 4.52273 4.56768 4.59217 4.60038 4.62328 4.67840 4.72845 4.74224 4.83595 4.86044 4.99726 5.02228 5.31430 5.38733 5.42753 5.48783 5.72918 6.13854 6.20804 6.41067 6.42272 6.99506 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.375 6.375 3 C 0.065 3.935 4 H 0.093 0.907 5 C -0.169 4.169 6 C 0.122 3.878 7 H 0.125 0.875 8 N -0.602 5.602 9 C 0.068 3.932 10 C 0.523 3.477 11 O -0.539 6.539 12 C -0.140 4.140 13 C 0.074 3.926 14 O -0.316 6.316 15 C 0.132 3.868 16 C -0.126 4.126 17 C -0.081 4.081 18 C -0.076 4.076 19 O -0.529 6.529 20 Si 0.689 3.311 21 C -0.155 4.155 22 C -0.073 4.073 23 C -0.202 4.202 24 C -0.148 4.148 25 H 0.044 0.956 26 H 0.043 0.957 27 H 0.087 0.913 28 H 0.077 0.923 29 H 0.098 0.902 30 H 0.063 0.937 31 H 0.076 0.924 32 H 0.082 0.918 33 H 0.107 0.893 34 H 0.108 0.892 35 H 0.073 0.927 36 H 0.072 0.928 37 H 0.134 0.866 38 H 0.120 0.880 39 H 0.376 0.624 40 H -0.260 1.260 41 H -0.257 1.257 42 H 0.129 0.871 43 H 0.130 0.870 44 H 0.132 0.868 45 H 0.096 0.904 46 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.659 -1.159 -1.406 3.224 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.006 3.994 4 H 0.111 0.889 5 C -0.207 4.207 6 C 0.018 3.982 7 H 0.143 0.857 8 N -0.334 5.334 9 C -0.075 4.075 10 C 0.311 3.689 11 O -0.416 6.416 12 C -0.179 4.179 13 C -0.001 4.001 14 O -0.230 6.230 15 C 0.087 3.913 16 C -0.144 4.144 17 C -0.081 4.081 18 C -0.185 4.185 19 O -0.335 6.335 20 Si 0.590 3.410 21 C -0.172 4.172 22 C -0.091 4.091 23 C -0.221 4.221 24 C -0.187 4.187 25 H 0.062 0.938 26 H 0.061 0.939 27 H 0.106 0.894 28 H 0.096 0.904 29 H 0.117 0.883 30 H 0.081 0.919 31 H 0.095 0.905 32 H 0.101 0.899 33 H 0.125 0.875 34 H 0.126 0.874 35 H 0.091 0.909 36 H 0.090 0.910 37 H 0.152 0.848 38 H 0.138 0.862 39 H 0.224 0.776 40 H -0.185 1.185 41 H -0.182 1.182 42 H 0.146 0.854 43 H 0.148 0.852 44 H 0.150 0.850 45 H 0.115 0.885 46 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -1.950 -0.822 -1.370 2.521 hybrid contribution -1.062 -0.045 0.990 1.453 sum -3.012 -0.868 -0.380 3.158 Atomic orbital electron populations 1.22837 0.80704 1.03100 1.00157 1.87941 1.20046 1.26826 1.94546 1.23443 0.93868 0.85836 0.96246 0.88936 1.24014 0.97147 1.01588 0.97967 1.22341 0.79951 1.00815 0.95099 0.85701 1.47696 1.10815 1.09822 1.65076 1.21943 1.01848 0.83234 1.00479 1.20324 0.86807 0.84218 0.77535 1.90732 1.79673 1.23083 1.48091 1.21508 0.92101 0.99376 1.04957 1.22429 0.79766 0.97117 1.00807 1.85976 1.21743 1.33568 1.81712 1.18960 0.90170 0.86221 0.95930 1.20236 0.90507 1.00018 1.03671 1.20073 0.96046 0.93085 0.98941 1.25077 0.96157 1.12204 0.85110 1.86602 1.81037 1.49462 1.16396 0.94890 0.78926 0.75240 0.91954 1.20925 0.96426 0.96620 1.03274 1.20928 0.92853 0.98479 0.96862 1.21398 1.01543 0.92724 1.06408 1.23706 0.95410 1.00785 0.98780 0.93778 0.93855 0.89424 0.90394 0.88328 0.91862 0.90546 0.89940 0.87456 0.87400 0.90880 0.90968 0.84824 0.86203 0.77602 1.18509 1.18232 0.85404 0.85159 0.84981 0.88516 0.90167 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.85 101.05 1.10 1.06 16 2 O -0.38 -0.36 10.71 -35.23 -0.38 -0.74 16 3 C 0.06 -0.05 4.31 -25.92 -0.11 -0.16 16 4 H 0.09 -0.17 7.87 -51.93 -0.41 -0.58 16 5 C -0.17 0.19 7.41 -25.91 -0.19 0.00 16 6 C 0.12 -0.04 4.23 -67.12 -0.28 -0.32 16 7 H 0.13 0.11 7.17 -51.93 -0.37 -0.26 16 8 N -0.60 0.31 3.09 -173.00 -0.53 -0.23 16 9 C 0.07 -0.21 9.17 59.85 0.55 0.34 16 10 C 0.52 0.58 7.67 -10.98 -0.08 0.50 16 11 O -0.54 -2.49 15.44 5.56 0.09 -2.40 16 12 C -0.14 0.15 4.68 -27.88 -0.13 0.02 16 13 C 0.07 0.05 4.03 37.15 0.15 0.20 16 14 O -0.32 -0.68 10.14 -19.43 -0.20 -0.88 16 15 C 0.13 0.32 6.69 -39.22 -0.26 0.06 16 16 C -0.13 -0.28 9.55 -39.43 -0.38 -0.65 16 17 C -0.08 -0.09 5.39 -104.64 -0.56 -0.65 16 18 C -0.08 -0.03 2.82 36.01 0.10 0.08 16 19 O -0.53 -0.94 12.77 -35.23 -0.45 -1.39 16 20 Si 0.69 -0.41 29.79 -169.99 -5.06 -5.47 16 21 C -0.15 -0.06 8.67 -39.56 -0.34 -0.40 16 22 C -0.07 -0.04 10.04 -39.61 -0.40 -0.44 16 23 C -0.20 -0.30 9.04 -39.44 -0.36 -0.65 16 24 C -0.15 0.12 7.50 -25.92 -0.19 -0.08 16 25 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 26 H 0.04 -0.08 8.14 -51.93 -0.42 -0.51 16 27 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 28 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 29 H 0.10 -0.12 5.99 -51.93 -0.31 -0.43 16 30 H 0.06 -0.23 8.14 -51.93 -0.42 -0.66 16 31 H 0.08 -0.34 6.61 -51.93 -0.34 -0.68 16 32 H 0.08 -0.28 5.79 -51.93 -0.30 -0.58 16 33 H 0.11 -0.26 7.41 -51.92 -0.38 -0.65 16 34 H 0.11 -0.26 8.11 -51.93 -0.42 -0.68 16 35 H 0.07 0.07 7.60 -51.92 -0.39 -0.33 16 36 H 0.07 0.07 7.64 -51.93 -0.40 -0.32 16 37 H 0.13 0.28 8.06 -52.49 -0.42 -0.14 16 38 H 0.12 -0.05 7.96 -51.93 -0.41 -0.46 16 39 H 0.38 -0.38 8.70 45.56 0.40 0.02 16 40 H -0.26 -0.36 7.11 56.52 0.40 0.04 16 41 H -0.26 -0.67 7.11 56.52 0.40 -0.27 16 42 H 0.13 -0.19 4.87 -52.49 -0.26 -0.45 16 43 H 0.13 -0.20 8.06 -52.49 -0.42 -0.63 16 44 H 0.13 0.07 6.30 -52.49 -0.33 -0.26 16 45 H 0.10 -0.06 7.46 -51.93 -0.39 -0.45 16 46 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 LS Contribution 372.65 15.07 5.62 5.62 Total: 0.00 -7.76 372.65 -9.23 -16.98 By element: Atomic # 1 Polarization: -3.48 SS G_CDS: -6.90 Total: -10.39 kcal Atomic # 6 Polarization: 0.29 SS G_CDS: -1.40 Total: -1.11 kcal Atomic # 7 Polarization: 0.31 SS G_CDS: -0.53 Total: -0.23 kcal Atomic # 8 Polarization: -4.47 SS G_CDS: -0.94 Total: -5.41 kcal Atomic # 14 Polarization: -0.41 SS G_CDS: -5.06 Total: -5.47 kcal Total LS contribution 5.62 Total: 5.62 kcal Total: -7.76 -9.23 -16.98 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10122440_4549614.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.922 kcal (2) G-P(sol) polarization free energy of solvation -7.758 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -74.680 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.225 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.983 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.905 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds