Wall clock time and date at job start Sat Mar 6 2021 11:30:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42905 * 113.99750 * 2 1 4 4 H 1.08993 * 112.84622 * 341.19573 * 3 2 1 5 5 C 1.53787 * 113.68801 * 112.46294 * 3 2 1 6 6 C 1.54049 * 87.07364 * 139.98653 * 5 3 2 7 7 H 1.09010 * 113.61379 * 89.06886 * 6 5 3 8 8 N 1.46498 * 113.69677 * 220.05063 * 6 5 3 9 9 C 1.46493 * 119.99979 * 43.53162 * 8 6 5 10 10 C 1.34780 * 119.99789 * 223.53635 * 8 6 5 11 11 O 1.21279 * 120.00567 * 359.97438 * 10 8 6 12 12 C 1.50704 * 119.99649 * 180.02562 * 10 8 6 13 13 C 1.53004 * 109.47162 * 179.97438 * 12 10 8 14 14 C 1.52996 * 109.47122 * 179.97438 * 13 12 10 15 15 O 1.42895 * 109.46901 * 180.02562 * 14 13 12 16 16 C 1.35906 * 116.99872 * 180.02562 * 15 14 13 17 17 C 1.38712 * 120.05195 * 179.72349 * 16 15 14 18 18 C 1.38175 * 119.93855 * 179.72101 * 17 16 15 19 19 C 1.50694 * 119.97006 * 180.27600 * 18 17 16 20 20 O 1.42901 * 109.47512 * 300.29761 * 19 18 17 21 21 Si 1.86304 * 109.47056 * 180.29587 * 19 18 17 22 22 C 1.38243 * 120.05414 * 0.57399 * 18 17 16 23 23 C 1.38288 * 120.11325 * 359.67672 * 22 18 17 24 24 C 1.38121 * 120.05559 * 0.05028 * 23 22 18 25 25 C 1.53777 * 86.98939 * 334.56946 * 6 5 3 26 26 H 1.09001 * 109.46965 * 60.00364 * 1 2 3 27 27 H 1.09001 * 109.47101 * 180.02562 * 1 2 3 28 28 H 1.09000 * 109.47473 * 299.99761 * 1 2 3 29 29 H 1.08997 * 113.61084 * 254.53501 * 5 3 2 30 30 H 1.08996 * 113.61640 * 25.35959 * 5 3 2 31 31 H 1.08998 * 109.47045 * 94.17887 * 9 8 6 32 32 H 1.09003 * 109.47258 * 214.17715 * 9 8 6 33 33 H 1.09000 * 109.47147 * 334.17624 * 9 8 6 34 34 H 1.09001 * 109.46576 * 299.99479 * 12 10 8 35 35 H 1.08996 * 109.47216 * 59.99584 * 12 10 8 36 36 H 1.08994 * 109.46800 * 300.00160 * 13 12 10 37 37 H 1.09008 * 109.46590 * 59.99616 * 13 12 10 38 38 H 1.09001 * 109.46768 * 299.99759 * 14 13 12 39 39 H 1.08996 * 109.47064 * 59.99887 * 14 13 12 40 40 H 1.07998 * 120.03397 * 0.02562 * 17 16 15 41 41 H 1.09002 * 109.47525 * 60.29750 * 19 18 17 42 42 H 0.96702 * 113.99690 * 300.00762 * 20 19 18 43 43 H 1.48501 * 110.00002 * 179.97438 * 21 19 18 44 44 H 1.48494 * 110.00031 * 301.32045 * 21 19 18 45 45 H 1.08002 * 119.94117 * 179.70580 * 22 18 17 46 46 H 1.08003 * 119.97178 * 180.02562 * 23 22 18 47 47 H 1.07998 * 120.02596 * 180.02562 * 24 23 22 48 48 H 1.08999 * 113.61218 * 270.83956 * 25 6 5 49 49 H 1.08998 * 113.62094 * 140.02239 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3136 2.0788 -0.3238 5 6 2.7530 1.6511 1.3014 6 6 3.8238 2.3210 0.4195 7 1 3.6222 3.3716 0.2100 8 7 5.1954 2.0835 0.8759 9 6 5.6017 0.7443 1.3089 10 6 6.0835 3.0971 0.8975 11 8 5.7472 4.2058 0.5386 12 6 7.4946 2.8527 1.3665 13 6 8.2901 4.1576 1.2921 14 6 9.7226 3.9095 1.7689 15 8 10.4652 5.1283 1.7000 16 6 11.7661 5.0811 2.0906 17 6 12.5474 6.2263 2.0441 18 6 13.8681 6.1769 2.4472 19 6 14.7158 7.4220 2.4028 20 8 14.7767 7.9093 1.0608 21 14 16.4359 7.0237 2.9974 22 6 14.4141 4.9848 2.8854 23 6 13.6387 3.8406 2.9278 24 6 12.3164 3.8860 2.5312 25 6 3.3755 1.3720 -0.7044 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3634 0.5138 0.8900 29 1 2.2131 2.3504 1.9398 30 1 3.1155 0.7772 1.8426 31 1 6.0518 0.2124 0.4707 32 1 6.3276 0.8286 2.1177 33 1 4.7281 0.1955 1.6606 34 1 7.4784 2.4948 2.3959 35 1 7.9649 2.1041 0.7289 36 1 8.3061 4.5150 0.2626 37 1 7.8199 4.9065 1.9295 38 1 9.7060 3.5522 2.7986 39 1 10.1929 3.1604 1.1319 40 1 12.1225 7.1568 1.6977 41 1 14.2763 8.1840 3.0464 42 1 15.1579 7.2818 0.4315 43 1 17.2821 8.2433 2.9579 44 1 16.3833 6.4860 4.3806 45 1 15.4480 4.9472 3.1956 46 1 14.0675 2.9106 3.2709 47 1 11.7111 2.9922 2.5649 48 1 3.9094 0.4218 -0.7124 49 1 3.3379 1.8445 -1.6860 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10122440_4549616.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:30:00 Heat of formation + Delta-G solvation = -90.395044 kcal Electronic energy + Delta-G solvation = -27936.308732 eV Core-core repulsion = 23831.756856 eV Total energy + Delta-G solvation = -4104.551876 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.182 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -41.56185 -41.21599 -39.93155 -39.13409 -37.53526 -37.24846 -35.32174 -34.69395 -32.43118 -31.22955 -28.76737 -28.28992 -27.68317 -26.83183 -26.80184 -25.09498 -23.68349 -23.18451 -21.85680 -20.95197 -20.08424 -19.12036 -18.54201 -17.87229 -17.75624 -17.57963 -17.16427 -16.99834 -16.81618 -16.73078 -16.13310 -16.10854 -16.00399 -15.34845 -15.11966 -15.04130 -14.90466 -14.58387 -14.19066 -14.14830 -14.08208 -13.73618 -13.56775 -13.33250 -13.25613 -13.13427 -13.00741 -12.76619 -12.70907 -12.41428 -12.25910 -12.22340 -11.97915 -11.89643 -11.85935 -11.66216 -11.58212 -10.82074 -10.54135 -10.47739 -9.88207 -9.71034 -9.20454 -5.01783 0.23825 0.44216 1.29495 1.56203 1.65027 1.73234 1.97424 2.22422 2.70858 2.82564 3.30181 3.43916 3.46571 3.49685 3.65818 3.72370 3.76401 3.77198 3.81099 3.88441 3.94266 4.02260 4.09130 4.14165 4.21563 4.22763 4.26414 4.33034 4.39103 4.39667 4.41363 4.43887 4.54065 4.56905 4.61431 4.65547 4.68958 4.74570 4.86164 4.87907 4.95949 5.00198 5.03021 5.15728 5.30480 5.39539 5.45114 5.46750 5.72376 6.15838 6.28583 6.43852 6.59272 7.11129 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.376 6.376 3 C 0.064 3.936 4 H 0.092 0.908 5 C -0.169 4.169 6 C 0.122 3.878 7 H 0.125 0.875 8 N -0.605 5.605 9 C 0.070 3.930 10 C 0.517 3.483 11 O -0.534 6.534 12 C -0.136 4.136 13 C -0.106 4.106 14 C 0.060 3.940 15 O -0.311 6.311 16 C 0.132 3.868 17 C -0.126 4.126 18 C -0.081 4.081 19 C -0.070 4.070 20 O -0.539 6.539 21 Si 0.694 3.306 22 C -0.157 4.157 23 C -0.073 4.073 24 C -0.206 4.206 25 C -0.148 4.148 26 H 0.044 0.956 27 H 0.087 0.913 28 H 0.043 0.957 29 H 0.077 0.923 30 H 0.098 0.902 31 H 0.061 0.939 32 H 0.074 0.926 33 H 0.081 0.919 34 H 0.098 0.902 35 H 0.098 0.902 36 H 0.084 0.916 37 H 0.083 0.917 38 H 0.064 0.936 39 H 0.065 0.935 40 H 0.134 0.866 41 H 0.115 0.885 42 H 0.379 0.621 43 H -0.255 1.255 44 H -0.258 1.258 45 H 0.128 0.872 46 H 0.130 0.870 47 H 0.130 0.870 48 H 0.096 0.904 49 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.002 -7.136 0.510 7.154 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.006 3.994 4 H 0.110 0.890 5 C -0.207 4.207 6 C 0.018 3.982 7 H 0.142 0.858 8 N -0.338 5.338 9 C -0.073 4.073 10 C 0.305 3.695 11 O -0.411 6.411 12 C -0.176 4.176 13 C -0.144 4.144 14 C -0.015 4.015 15 O -0.225 6.225 16 C 0.087 3.913 17 C -0.145 4.145 18 C -0.081 4.081 19 C -0.181 4.181 20 O -0.344 6.344 21 Si 0.596 3.404 22 C -0.175 4.175 23 C -0.091 4.091 24 C -0.224 4.224 25 C -0.187 4.187 26 H 0.062 0.938 27 H 0.106 0.894 28 H 0.061 0.939 29 H 0.095 0.905 30 H 0.116 0.884 31 H 0.079 0.921 32 H 0.092 0.908 33 H 0.099 0.901 34 H 0.116 0.884 35 H 0.117 0.883 36 H 0.102 0.898 37 H 0.102 0.898 38 H 0.082 0.918 39 H 0.083 0.917 40 H 0.152 0.848 41 H 0.133 0.867 42 H 0.227 0.773 43 H -0.180 1.180 44 H -0.183 1.183 45 H 0.145 0.855 46 H 0.148 0.852 47 H 0.147 0.853 48 H 0.114 0.886 49 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 0.172 -5.858 1.126 5.968 hybrid contribution -0.935 -0.124 0.291 0.987 sum -0.763 -5.982 1.417 6.195 Atomic orbital electron populations 1.22833 0.80724 1.03076 1.00161 1.87937 1.20033 1.26872 1.94555 1.23444 0.93880 0.85782 0.96311 0.88966 1.24052 0.97208 1.01526 0.97927 1.22358 0.80156 1.00720 0.94979 0.85751 1.47744 1.10817 1.09912 1.65338 1.21893 1.01717 0.83458 1.00224 1.20611 0.87214 0.84110 0.77564 1.90735 1.79584 1.23182 1.47556 1.21567 0.92584 0.99744 1.03676 1.21247 0.91589 0.97131 1.04404 1.22818 0.91909 0.85605 1.01179 1.86089 1.20063 1.35138 1.81185 1.19030 0.83598 0.94120 0.94547 1.20273 0.92737 0.97521 1.03952 1.20145 0.94185 0.95330 0.98455 1.25121 1.08571 0.95694 0.88708 1.86516 1.86197 1.44620 1.17047 0.94619 0.77434 0.84526 0.83869 1.20920 0.99863 0.92650 1.04053 1.20909 0.93028 0.98295 0.96911 1.21312 0.97274 0.97325 1.06521 1.23696 0.95385 1.00757 0.98839 0.93779 0.89441 0.93862 0.90456 0.88405 0.92068 0.90754 0.90087 0.88375 0.88327 0.89761 0.89836 0.91823 0.91720 0.84789 0.86740 0.77321 1.17979 1.18302 0.85460 0.85224 0.85266 0.88598 0.90230 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.06 16 2 O -0.38 -0.42 10.72 -35.23 -0.38 -0.80 16 3 C 0.06 -0.03 4.31 -25.92 -0.11 -0.14 16 4 H 0.09 -0.14 7.87 -51.93 -0.41 -0.55 16 5 C -0.17 0.15 7.42 -25.77 -0.19 -0.04 16 6 C 0.12 0.00 4.25 -66.98 -0.28 -0.28 16 7 H 0.12 0.18 7.18 -51.92 -0.37 -0.19 16 8 N -0.61 0.24 3.09 -172.84 -0.53 -0.29 16 9 C 0.07 -0.24 9.17 59.84 0.55 0.31 16 10 C 0.52 0.68 7.67 -10.98 -0.08 0.60 16 11 O -0.53 -2.94 15.44 5.56 0.09 -2.86 16 12 C -0.14 0.28 4.31 -27.88 -0.12 0.16 16 13 C -0.11 0.01 4.87 -26.73 -0.13 -0.12 16 14 C 0.06 -0.05 4.74 37.16 0.18 0.13 16 15 O -0.31 -0.81 10.14 -19.45 -0.20 -1.01 16 16 C 0.13 0.30 6.69 -39.22 -0.26 0.04 16 17 C -0.13 -0.31 9.55 -39.43 -0.38 -0.69 16 18 C -0.08 -0.09 5.39 -104.65 -0.56 -0.65 16 19 C -0.07 -0.04 2.82 36.00 0.10 0.07 16 20 O -0.54 -0.54 12.76 -35.23 -0.45 -0.99 16 21 Si 0.69 -0.51 29.79 -169.99 -5.06 -5.58 16 22 C -0.16 0.00 8.67 -39.56 -0.34 -0.34 16 23 C -0.07 0.02 10.04 -39.61 -0.40 -0.38 16 24 C -0.21 -0.08 9.04 -39.44 -0.36 -0.44 16 25 C -0.15 0.08 7.49 -25.92 -0.19 -0.12 16 26 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 27 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 28 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 29 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 30 H 0.10 -0.11 6.00 -51.93 -0.31 -0.42 16 31 H 0.06 -0.24 8.14 -51.93 -0.42 -0.67 16 32 H 0.07 -0.37 6.61 -51.93 -0.34 -0.72 16 33 H 0.08 -0.28 5.79 -51.93 -0.30 -0.58 16 34 H 0.10 -0.40 7.41 -51.93 -0.38 -0.78 16 35 H 0.10 -0.39 8.11 -51.93 -0.42 -0.81 16 36 H 0.08 0.13 8.10 -51.93 -0.42 -0.29 16 37 H 0.08 0.13 8.10 -51.92 -0.42 -0.29 16 38 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 39 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 40 H 0.13 0.38 8.06 -52.49 -0.42 -0.04 16 41 H 0.12 0.11 7.96 -51.93 -0.41 -0.30 16 42 H 0.38 -1.11 8.70 45.56 0.40 -0.72 16 43 H -0.25 -0.63 7.11 56.52 0.40 -0.23 16 44 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 45 H 0.13 -0.24 4.87 -52.49 -0.26 -0.49 16 46 H 0.13 -0.33 8.06 -52.48 -0.42 -0.76 16 47 H 0.13 -0.22 6.30 -52.49 -0.33 -0.55 16 48 H 0.10 -0.04 7.46 -51.93 -0.39 -0.43 16 49 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 LS Contribution 394.16 15.07 5.94 5.94 Total: 0.00 -9.00 394.16 -9.84 -18.84 By element: Atomic # 1 Polarization: -4.67 SS G_CDS: -7.75 Total: -12.42 kcal Atomic # 6 Polarization: 0.65 SS G_CDS: -1.49 Total: -0.84 kcal Atomic # 7 Polarization: 0.24 SS G_CDS: -0.53 Total: -0.29 kcal Atomic # 8 Polarization: -4.71 SS G_CDS: -0.94 Total: -5.65 kcal Atomic # 14 Polarization: -0.51 SS G_CDS: -5.06 Total: -5.58 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -9.00 -9.84 -18.84 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10122440_4549616.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -71.551 kcal (2) G-P(sol) polarization free energy of solvation -9.005 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.556 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.839 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.844 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.395 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds