Wall clock time and date at job start Sat Mar 6 2021 11:30:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35996 * 117.00174 * 2 1 4 4 C 1.39149 * 120.06932 * 179.97438 * 3 2 1 5 5 O 1.35996 * 120.07751 * 359.97438 * 4 3 2 6 6 C 1.42899 * 116.99959 * 179.72858 * 5 4 3 7 7 C 1.50706 * 109.46644 * 180.02562 * 6 5 4 8 8 O 1.21274 * 120.00003 * 359.97438 * 7 6 5 9 9 N 1.34780 * 119.99474 * 179.97438 * 7 6 5 10 10 C 1.46493 * 120.00231 * 0.02562 * 9 7 6 11 11 C 1.46500 * 119.99609 * 180.02562 * 9 7 6 12 12 H 1.09006 * 112.90948 * 354.85656 * 11 9 7 13 13 C 1.53772 * 113.61660 * 126.11107 * 11 9 7 14 14 C 1.53779 * 87.17487 * 140.02158 * 13 11 9 15 15 H 1.08993 * 113.61882 * 89.07678 * 14 13 11 16 16 O 1.42902 * 113.61203 * 219.97965 * 14 13 11 17 17 C 1.42907 * 113.99733 * 209.99715 * 16 14 13 18 18 C 1.53780 * 87.07899 * 334.52537 * 14 13 11 19 19 C 1.38566 * 119.85106 * 179.72261 * 4 3 2 20 20 C 1.38243 * 119.99879 * 0.27564 * 19 4 3 21 21 N 1.48004 * 119.92688 * 179.97438 * 20 19 4 22 22 O 1.21800 * 119.99971 * 0.02562 * 21 20 19 23 23 O 1.21802 * 120.00270 * 179.97438 * 21 20 19 24 24 C 1.38256 * 120.14792 * 359.97438 * 20 19 4 25 25 C 1.50694 * 119.92657 * 180.02562 * 24 20 19 26 26 O 1.42906 * 109.47293 * 74.99979 * 25 24 20 27 27 Si 1.86297 * 109.47227 * 194.99927 * 25 24 20 28 28 C 1.38243 * 120.14268 * 0.02562 * 24 20 19 29 29 H 1.09000 * 109.47757 * 179.97438 * 1 2 3 30 30 H 1.09000 * 109.47827 * 300.00719 * 1 2 3 31 31 H 1.09012 * 109.46599 * 60.00285 * 1 2 3 32 32 H 1.08991 * 109.47362 * 60.00292 * 6 5 4 33 33 H 1.09000 * 109.47001 * 299.99347 * 6 5 4 34 34 H 1.08998 * 109.47045 * 274.17414 * 10 9 7 35 35 H 1.09003 * 109.47258 * 34.17242 * 10 9 7 36 36 H 1.09000 * 109.47147 * 154.17151 * 10 9 7 37 37 H 1.09009 * 113.61383 * 25.42968 * 13 11 9 38 38 H 1.08998 * 113.61778 * 254.61499 * 13 11 9 39 39 H 1.09000 * 109.46832 * 60.00123 * 17 16 14 40 40 H 1.08996 * 109.47108 * 180.02562 * 17 16 14 41 41 H 1.08996 * 109.47359 * 300.00098 * 17 16 14 42 42 H 1.09001 * 113.61259 * 139.98185 * 18 14 13 43 43 H 1.09002 * 113.61715 * 270.79624 * 18 14 13 44 44 H 1.07997 * 120.00376 * 180.29406 * 19 4 3 45 45 H 1.08996 * 109.47449 * 315.00150 * 25 24 20 46 46 H 0.96703 * 113.99884 * 59.99353 * 26 25 24 47 47 H 1.48498 * 110.00232 * 58.68037 * 27 25 24 48 48 H 1.48500 * 110.00322 * 180.02562 * 27 25 24 49 49 H 1.08001 * 119.99633 * 180.02562 * 28 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2117 0.0000 4 6 3.4360 1.2862 0.0005 5 8 4.1795 0.1475 0.0016 6 6 5.6003 0.3005 -0.0039 7 6 6.2518 -1.0585 -0.0025 8 8 5.5668 -2.0593 0.0032 9 7 7.5956 -1.1615 -0.0075 10 6 8.4229 0.0474 -0.0139 11 6 8.2289 -2.4826 -0.0067 12 1 7.5110 -3.2973 0.0882 13 6 9.2395 -2.6820 -1.1484 14 6 10.1280 -3.4176 -0.1315 15 1 9.9284 -4.4874 -0.0706 16 8 11.5189 -3.1180 -0.2644 17 6 12.3835 -4.1869 0.1256 18 6 9.4225 -2.5962 0.9605 19 6 4.0604 2.5232 -0.0053 20 6 3.3031 3.6797 -0.0058 21 7 3.9716 5.0001 -0.0115 22 8 5.1878 5.0669 -0.0161 23 8 3.3057 6.0200 -0.0125 24 6 1.9225 3.6057 -0.0011 25 6 1.1018 4.8696 -0.0024 26 8 1.1307 5.4550 -1.3057 27 14 -0.6578 4.4679 0.4591 28 6 1.2933 2.3748 0.0047 29 1 -0.3634 -1.0276 -0.0005 30 1 -0.3635 0.5139 0.8899 31 1 -0.3633 0.5139 -0.8901 32 1 5.9097 0.8530 0.8831 33 1 5.9034 0.8473 -0.8968 34 1 8.5623 0.3869 -1.0402 35 1 7.9287 0.8289 0.5633 36 1 9.3933 -0.1740 0.4306 37 1 9.6735 -1.7516 -1.5149 38 1 8.8716 -3.3221 -1.9503 39 1 12.1823 -5.0612 -0.4934 40 1 13.4214 -3.8804 -0.0043 41 1 12.2064 -4.4341 1.1723 42 1 9.2012 -3.1674 1.8621 43 1 9.9074 -1.6431 1.1718 44 1 5.1386 2.5838 -0.0097 45 1 1.5157 5.5723 0.7207 46 1 0.7765 4.8841 -2.0012 47 1 -0.6984 3.8294 1.7992 48 1 -1.4777 5.7060 0.4610 49 1 0.2147 2.3197 0.0079 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10122440_4549636.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:30:14 Heat of formation + Delta-G solvation = -96.928256 kcal Electronic energy + Delta-G solvation = -36212.480715 eV Core-core repulsion = 31113.484529 eV Total energy + Delta-G solvation = -5098.996186 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.160 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -43.40895 -42.16816 -41.55886 -40.30152 -39.45644 -39.16882 -37.76159 -37.49940 -37.12278 -35.29546 -32.68572 -32.54038 -30.06765 -28.78293 -28.27240 -27.91972 -27.63241 -26.77170 -25.94316 -24.96707 -23.73491 -23.18288 -21.30861 -20.80941 -20.21114 -19.79384 -19.51700 -18.87302 -18.68430 -18.29530 -18.12458 -17.87004 -17.56419 -17.32313 -16.97164 -16.89505 -16.42738 -16.28901 -16.20528 -16.08453 -15.73584 -15.45611 -15.09174 -14.91348 -14.60751 -14.40056 -14.33395 -13.94937 -13.89773 -13.66057 -13.45132 -13.33315 -13.05455 -13.00890 -12.69216 -12.67316 -12.52260 -12.44766 -12.35247 -12.27706 -12.25562 -12.21469 -11.96989 -11.80236 -11.78469 -11.05150 -10.53683 -10.50042 -10.46749 -9.80676 -9.50509 -5.13528 -1.37072 -0.44598 0.15666 0.29875 1.12579 1.15760 1.28427 1.57410 1.88806 1.88936 1.93778 2.12937 2.88490 2.97127 3.09169 3.23457 3.29444 3.43645 3.46370 3.47393 3.55346 3.74780 3.77675 3.83294 3.86847 3.92019 4.04042 4.10503 4.15248 4.22152 4.27512 4.39014 4.41327 4.48512 4.53719 4.54488 4.55318 4.65764 4.67431 4.72375 4.80753 4.81751 4.87545 4.90203 4.95617 5.02914 5.24520 5.36726 5.58664 6.04137 6.14513 6.23988 6.46457 6.71476 6.88525 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.004 4.004 2 O -0.307 6.307 3 C 0.172 3.828 4 C 0.099 3.901 5 O -0.290 6.290 6 C 0.031 3.969 7 C 0.515 3.485 8 O -0.565 6.565 9 N -0.594 5.594 10 C 0.054 3.946 11 C 0.118 3.882 12 H 0.108 0.892 13 C -0.143 4.143 14 C 0.063 3.937 15 H 0.101 0.899 16 O -0.394 6.394 17 C 0.023 3.977 18 C -0.160 4.160 19 C -0.110 4.110 20 C -0.045 4.045 21 N 0.035 4.965 22 O -0.186 6.186 23 O -0.165 6.165 24 C -0.039 4.039 25 C -0.092 4.092 26 O -0.536 6.536 27 Si 0.787 3.213 28 C -0.162 4.162 29 H 0.121 0.879 30 H 0.080 0.920 31 H 0.094 0.906 32 H 0.126 0.874 33 H 0.126 0.874 34 H 0.078 0.922 35 H 0.094 0.906 36 H 0.092 0.908 37 H 0.099 0.901 38 H 0.078 0.922 39 H 0.050 0.950 40 H 0.093 0.907 41 H 0.049 0.951 42 H 0.080 0.920 43 H 0.104 0.896 44 H 0.182 0.818 45 H 0.115 0.885 46 H 0.393 0.607 47 H -0.271 1.271 48 H -0.290 1.290 49 H 0.195 0.805 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.378 -4.787 -0.724 5.034 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.098 4.098 2 O -0.219 6.219 3 C 0.123 3.877 4 C 0.052 3.948 5 O -0.203 6.203 6 C -0.047 4.047 7 C 0.303 3.697 8 O -0.443 6.443 9 N -0.326 5.326 10 C -0.087 4.087 11 C 0.015 3.985 12 H 0.126 0.874 13 C -0.182 4.182 14 C 0.005 3.995 15 H 0.119 0.881 16 O -0.313 6.313 17 C -0.073 4.073 18 C -0.198 4.198 19 C -0.130 4.130 20 C -0.130 4.130 21 N 0.548 4.452 22 O -0.396 6.396 23 O -0.379 6.379 24 C -0.042 4.042 25 C -0.200 4.200 26 O -0.343 6.343 27 Si 0.689 3.311 28 C -0.181 4.181 29 H 0.139 0.861 30 H 0.099 0.901 31 H 0.112 0.888 32 H 0.143 0.857 33 H 0.144 0.856 34 H 0.097 0.903 35 H 0.113 0.887 36 H 0.110 0.890 37 H 0.118 0.882 38 H 0.097 0.903 39 H 0.068 0.932 40 H 0.111 0.889 41 H 0.068 0.932 42 H 0.098 0.902 43 H 0.122 0.878 44 H 0.199 0.801 45 H 0.132 0.868 46 H 0.242 0.758 47 H -0.198 1.198 48 H -0.218 1.218 49 H 0.211 0.789 Dipole moment (debyes) X Y Z Total from point charges -2.313 -5.542 0.098 6.006 hybrid contribution 1.081 0.621 0.358 1.297 sum -1.232 -4.921 0.456 5.094 Atomic orbital electron populations 1.23819 0.74646 1.07087 1.04216 1.86336 1.24898 1.24486 1.86171 1.18665 0.89078 0.86433 0.93528 1.17983 0.88876 0.85072 1.02879 1.86299 1.18342 1.26935 1.88732 1.22934 0.78812 0.96049 1.06881 1.20349 0.82645 0.90541 0.76143 1.90753 1.63461 1.39760 1.50357 1.47702 1.04502 1.08239 1.72198 1.22282 0.97003 0.85310 1.04102 1.22353 0.93097 0.85455 0.97631 0.87381 1.23663 0.94952 1.02234 0.97321 1.23500 0.80667 0.99073 0.96304 0.88075 1.87906 1.16015 1.40414 1.86991 1.22960 0.94828 0.90058 0.99425 1.24008 0.95179 1.02466 0.98147 1.20886 1.02944 0.88200 1.00948 1.20549 0.92766 0.81896 1.17774 1.43715 1.00837 1.03429 0.97183 1.94502 0.96498 1.94115 1.54533 1.94577 1.64417 1.25376 1.53520 1.20233 0.91037 0.97693 0.95202 1.25772 1.10612 0.92782 0.90790 1.86672 1.87039 1.44610 1.15976 0.94384 0.71772 0.82205 0.82735 1.21088 1.01790 0.88049 1.07152 0.86078 0.90145 0.88800 0.85674 0.85625 0.90334 0.88710 0.88990 0.88227 0.90283 0.93170 0.88858 0.93218 0.90173 0.87755 0.80122 0.86789 0.75794 1.19754 1.21751 0.78881 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 0.04 9.81 113.37 1.11 1.16 16 2 O -0.31 0.07 10.28 -79.64 -0.82 -0.75 16 3 C 0.17 -0.16 6.70 22.57 0.15 0.00 16 4 C 0.10 0.11 6.70 22.57 0.15 0.26 16 5 O -0.29 -1.22 9.45 -67.09 -0.63 -1.86 16 6 C 0.03 -0.08 3.83 71.24 0.27 0.20 16 7 C 0.52 1.90 7.75 87.66 0.68 2.58 16 8 O -0.57 -7.82 15.96 16.03 0.26 -7.56 16 9 N -0.59 0.86 3.09 -819.15 -2.53 -1.67 16 10 C 0.05 -0.47 9.17 127.77 1.17 0.71 16 11 C 0.12 -0.04 4.25 45.61 0.19 0.15 16 12 H 0.11 0.38 7.18 -2.38 -0.02 0.37 16 13 C -0.14 0.25 7.49 31.12 0.23 0.48 16 14 C 0.06 -0.11 4.31 31.12 0.13 0.02 16 15 H 0.10 -0.38 7.87 -2.39 -0.02 -0.40 16 16 O -0.39 -0.54 10.71 -148.98 -1.60 -2.14 16 17 C 0.02 -0.07 10.85 113.37 1.23 1.16 16 18 C -0.16 0.43 7.41 31.21 0.23 0.67 16 19 C -0.11 0.02 8.54 22.35 0.19 0.21 16 20 C -0.05 -0.16 6.85 36.38 0.25 0.09 16 21 N 0.04 0.34 4.45 -46.46 -0.21 0.13 16 22 O -0.19 -1.98 18.44 18.89 0.35 -1.63 16 23 O -0.17 -2.13 14.62 25.10 0.37 -1.76 16 24 C -0.04 0.02 5.26 -19.86 -0.10 -0.08 16 25 C -0.09 -0.01 1.74 71.23 0.12 0.12 16 26 O -0.54 -0.62 11.80 -129.64 -1.53 -2.15 16 27 Si 0.79 -4.21 29.91 68.60 2.05 -2.16 16 28 C -0.16 0.84 7.65 22.35 0.17 1.02 16 29 H 0.12 -1.40 8.14 -2.39 -0.02 -1.41 16 30 H 0.08 -1.06 7.65 -2.39 -0.02 -1.07 16 31 H 0.09 -1.43 7.67 -2.38 -0.02 -1.45 16 32 H 0.13 -1.03 6.93 -2.39 -0.02 -1.05 16 33 H 0.13 -1.02 7.63 -2.39 -0.02 -1.03 16 34 H 0.08 -0.81 8.14 -2.39 -0.02 -0.83 16 35 H 0.09 -1.19 6.61 -2.39 -0.02 -1.21 16 36 H 0.09 -0.83 5.79 -2.39 -0.01 -0.85 16 37 H 0.10 -0.22 7.46 -2.38 -0.02 -0.23 16 38 H 0.08 -0.11 8.14 -2.39 -0.02 -0.13 16 39 H 0.05 -0.22 8.14 -2.39 -0.02 -0.24 16 40 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 41 H 0.05 -0.22 8.14 -2.39 -0.02 -0.24 16 42 H 0.08 -0.23 8.14 -2.39 -0.02 -0.25 16 43 H 0.10 -0.39 6.00 -2.39 -0.01 -0.40 16 44 H 0.18 -0.81 5.85 -2.91 -0.02 -0.83 16 45 H 0.11 0.56 6.07 -2.39 -0.01 0.54 16 46 H 0.39 -3.47 8.70 -74.06 -0.64 -4.12 16 47 H -0.27 0.54 7.11 99.48 0.71 1.25 16 48 H -0.29 -0.79 7.11 99.48 0.71 -0.08 16 49 H 0.19 -2.44 3.36 -2.91 -0.01 -2.45 16 Total: 0.00 -31.69 403.01 2.32 -29.37 By element: Atomic # 1 Polarization: -16.97 SS G_CDS: 0.42 Total: -16.55 kcal Atomic # 6 Polarization: 2.53 SS G_CDS: 6.19 Total: 8.72 kcal Atomic # 7 Polarization: 1.20 SS G_CDS: -2.74 Total: -1.54 kcal Atomic # 8 Polarization: -14.24 SS G_CDS: -3.61 Total: -17.84 kcal Atomic # 14 Polarization: -4.21 SS G_CDS: 2.05 Total: -2.16 kcal Total: -31.69 2.32 -29.37 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10122440_4549636.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.556 kcal (2) G-P(sol) polarization free energy of solvation -31.693 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.250 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.321 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.372 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.928 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds