Wall clock time and date at job start Sat Mar 6 2021 11:30:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.42902 * 114.00078 * 2 1 4 4 H 1.09001 * 112.90470 * 341.24822 * 3 2 1 5 5 C 1.53775 * 113.61550 * 112.49998 * 3 2 1 6 6 C 1.53776 * 87.08081 * 139.97864 * 5 3 2 7 7 H 1.09005 * 113.69023 * 89.13180 * 6 5 3 8 8 N 1.46506 * 113.61494 * 220.01577 * 6 5 3 9 9 C 1.46492 * 119.99800 * 37.50136 * 8 6 5 10 10 C 1.34773 * 119.99968 * 217.49680 * 8 6 5 11 11 O 1.21283 * 120.00360 * 359.73034 * 10 8 6 12 12 C 1.50706 * 120.00081 * 180.02562 * 10 8 6 13 13 O 1.42894 * 109.47263 * 179.72605 * 12 10 8 14 14 C 1.35898 * 116.99879 * 179.97438 * 13 12 10 15 15 C 1.38717 * 120.05452 * 179.72693 * 14 13 12 16 16 N 1.48002 * 120.02813 * 0.02562 * 15 14 13 17 17 O 1.21804 * 119.99988 * 180.02562 * 16 15 14 18 18 O 1.21795 * 119.99928 * 0.02562 * 16 15 14 19 19 C 1.38172 * 119.94292 * 179.75036 * 15 14 13 20 20 C 1.38251 * 120.05191 * 0.52229 * 19 15 14 21 21 C 1.50695 * 119.94057 * 179.72714 * 20 19 15 22 22 O 1.42904 * 109.47165 * 300.02365 * 21 20 19 23 23 Si 1.86296 * 109.47132 * 180.02562 * 21 20 19 24 24 C 1.38283 * 120.11160 * 359.74684 * 20 19 15 25 25 C 1.38122 * 120.05949 * 359.97438 * 24 20 19 26 26 C 1.53772 * 87.08358 * 334.56948 * 6 5 3 27 27 H 1.08995 * 109.47667 * 300.00457 * 1 2 3 28 28 H 1.09005 * 109.47036 * 60.00179 * 1 2 3 29 29 H 1.09004 * 109.47581 * 180.02562 * 1 2 3 30 30 H 1.09007 * 113.61172 * 25.43300 * 5 3 2 31 31 H 1.09001 * 113.61693 * 254.53123 * 5 3 2 32 32 H 1.09001 * 109.47443 * 269.99328 * 9 8 6 33 33 H 1.08999 * 109.47479 * 30.00306 * 9 8 6 34 34 H 1.09006 * 109.47080 * 149.99714 * 9 8 6 35 35 H 1.09001 * 109.46564 * 299.73030 * 12 10 8 36 36 H 1.08998 * 109.47012 * 59.72084 * 12 10 8 37 37 H 1.07992 * 119.97274 * 180.27502 * 19 15 14 38 38 H 1.09001 * 109.47356 * 60.02256 * 21 20 19 39 39 H 0.96701 * 114.00014 * 300.00153 * 22 21 20 40 40 H 1.48490 * 110.00304 * 58.67973 * 23 21 20 41 41 H 1.48499 * 110.00239 * 180.02562 * 23 21 20 42 42 H 1.08007 * 119.96695 * 179.97438 * 24 20 19 43 43 H 1.07997 * 120.02979 * 180.02562 * 25 24 20 44 44 H 1.08992 * 113.61782 * 139.98357 * 26 6 5 45 45 H 1.09002 * 113.61405 * 270.79764 * 26 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3142 2.0797 -0.3228 5 6 2.7534 1.6489 1.3017 6 6 3.8227 2.3181 0.4222 7 1 3.6236 3.3694 0.2143 8 7 5.1934 2.0785 0.8804 9 6 5.5625 0.7744 1.4364 10 6 6.1149 3.0579 0.7904 11 8 5.8106 4.1360 0.3255 12 6 7.5251 2.8114 1.2612 13 8 8.3082 3.9891 1.0572 14 6 9.6133 3.9348 1.4320 15 6 10.4329 5.0403 1.2573 16 7 9.8866 6.2807 0.6629 17 8 10.6068 7.2509 0.5092 18 8 8.7169 6.3314 0.3273 19 6 11.7582 4.9842 1.6439 20 6 12.2703 3.8241 2.1945 21 6 13.7177 3.7637 2.6097 22 8 14.5497 4.0043 1.4730 23 14 14.0935 2.0782 3.3086 24 6 11.4567 2.7189 2.3646 25 6 10.1297 2.7718 1.9850 26 6 3.3755 1.3719 -0.7045 27 1 -0.3634 0.5139 0.8899 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3634 -1.0277 0.0005 30 1 3.1165 0.7740 1.8410 31 1 2.2140 2.3477 1.9411 32 1 5.3974 0.7788 2.5138 33 1 4.9504 -0.0024 0.9781 34 1 6.6146 0.5764 1.2309 35 1 7.5153 2.5607 2.3220 36 1 7.9574 1.9853 0.6967 37 1 12.3956 5.8460 1.5122 38 1 13.9102 4.5227 3.3680 39 1 14.4314 3.3655 0.7567 40 1 13.8049 1.0321 2.2950 41 1 15.5178 2.0059 3.7224 42 1 11.8593 1.8137 2.7946 43 1 9.4947 1.9085 2.1184 44 1 3.3385 1.8470 -1.6847 45 1 3.9098 0.4218 -0.7146 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10122440_4549638.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:30:18 Heat of formation + Delta-G solvation = -67.466465 kcal Electronic energy + Delta-G solvation = -31378.271511 eV Core-core repulsion = 26754.772695 eV Total energy + Delta-G solvation = -4623.498816 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.144 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -43.02496 -41.91402 -41.34668 -40.15884 -39.32319 -37.70335 -37.44966 -37.11707 -35.34858 -33.50353 -32.40140 -30.21518 -28.48207 -27.78731 -27.59462 -26.84903 -26.78009 -25.18823 -23.87722 -22.81453 -21.32530 -20.52413 -20.27869 -19.46065 -19.22623 -18.41802 -18.39236 -18.35603 -18.06542 -17.77979 -17.25863 -17.00837 -16.58649 -16.48328 -16.34482 -16.15281 -15.88033 -15.71514 -15.22175 -14.99282 -14.76839 -14.50642 -14.12267 -13.98351 -13.84730 -13.61298 -13.57676 -13.36018 -13.24912 -12.84366 -12.59382 -12.55111 -12.34270 -12.19781 -12.02346 -12.01088 -11.93427 -11.84562 -11.73305 -10.97894 -10.92625 -10.89795 -10.57428 -9.92396 -9.85057 -5.22761 -1.13388 -0.38848 0.37929 0.53166 0.98833 1.04024 1.32460 1.34968 1.74943 1.92443 1.98387 2.77817 2.93821 2.97191 3.10247 3.20359 3.23452 3.37548 3.39020 3.48429 3.53884 3.58162 3.67256 3.69183 3.75301 3.82320 4.13242 4.16634 4.18805 4.19386 4.33084 4.36266 4.38076 4.40705 4.42808 4.57313 4.59620 4.66870 4.69778 4.78825 4.83934 4.91853 4.95388 5.27143 5.45703 5.70642 6.06936 6.14372 6.15022 6.93558 6.94031 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.376 6.376 3 C 0.065 3.935 4 H 0.094 0.906 5 C -0.165 4.165 6 C 0.125 3.875 7 H 0.127 0.873 8 N -0.602 5.602 9 C 0.067 3.933 10 C 0.516 3.484 11 O -0.495 6.495 12 C 0.033 3.967 13 O -0.254 6.254 14 C 0.201 3.799 15 C -0.076 4.076 16 N 0.028 4.972 17 O -0.177 6.177 18 O -0.118 6.118 19 C 0.009 3.991 20 C -0.156 4.156 21 C -0.072 4.072 22 O -0.525 6.525 23 Si 0.688 3.312 24 C -0.024 4.024 25 C -0.210 4.210 26 C -0.150 4.150 27 H 0.043 0.957 28 H 0.044 0.956 29 H 0.087 0.913 30 H 0.098 0.902 31 H 0.079 0.921 32 H 0.065 0.935 33 H 0.084 0.916 34 H 0.072 0.928 35 H 0.103 0.897 36 H 0.101 0.899 37 H 0.164 0.836 38 H 0.126 0.874 39 H 0.378 0.622 40 H -0.256 1.256 41 H -0.251 1.251 42 H 0.149 0.851 43 H 0.156 0.844 44 H 0.081 0.919 45 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.549 -10.042 5.168 11.399 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.006 3.994 4 H 0.112 0.888 5 C -0.204 4.204 6 C 0.022 3.978 7 H 0.145 0.855 8 N -0.337 5.337 9 C -0.076 4.076 10 C 0.301 3.699 11 O -0.368 6.368 12 C -0.046 4.046 13 O -0.163 6.163 14 C 0.151 3.849 15 C -0.160 4.160 16 N 0.548 4.452 17 O -0.386 6.386 18 O -0.342 6.342 19 C -0.009 4.009 20 C -0.158 4.158 21 C -0.182 4.182 22 O -0.331 6.331 23 Si 0.588 3.412 24 C -0.042 4.042 25 C -0.229 4.229 26 C -0.188 4.188 27 H 0.062 0.938 28 H 0.063 0.937 29 H 0.106 0.894 30 H 0.116 0.884 31 H 0.097 0.903 32 H 0.083 0.917 33 H 0.102 0.898 34 H 0.090 0.910 35 H 0.120 0.880 36 H 0.119 0.881 37 H 0.182 0.818 38 H 0.144 0.856 39 H 0.226 0.774 40 H -0.181 1.181 41 H -0.175 1.175 42 H 0.167 0.833 43 H 0.173 0.827 44 H 0.100 0.900 45 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -0.720 -10.237 5.400 11.596 hybrid contribution -0.180 0.281 -1.191 1.237 sum -0.899 -9.956 4.208 10.846 Atomic orbital electron populations 1.22836 0.80663 1.03092 1.00211 1.87932 1.20085 1.26810 1.94549 1.23438 0.93881 0.85888 0.96189 0.88829 1.23982 0.96995 1.01482 0.97927 1.22366 0.79301 1.01017 0.95126 0.85541 1.47607 1.09938 1.12986 1.63151 1.21932 1.01504 0.84758 0.99380 1.19828 0.85828 0.84586 0.79611 1.90852 1.79885 1.23676 1.42346 1.22801 0.90778 0.87737 1.03236 1.86499 1.16768 1.36346 1.76714 1.18703 0.83890 0.91997 0.90336 1.20588 0.95002 0.86106 1.14319 1.43338 1.01122 1.01667 0.99036 1.94557 1.58007 1.26252 1.59742 1.94699 0.99534 1.89156 1.50786 1.20842 0.90894 0.99369 0.89845 1.20252 0.97900 0.93314 1.04297 1.25070 0.85924 1.14670 0.92506 1.86660 1.63030 1.55648 1.27795 0.95172 0.85106 0.73692 0.87277 1.21259 0.92588 0.97775 0.92534 1.21261 0.97535 0.97480 1.06592 1.23722 0.95382 1.00719 0.98995 0.93822 0.93747 0.89440 0.88394 0.90269 0.91683 0.89773 0.90958 0.87951 0.88096 0.81804 0.85616 0.77417 1.18105 1.17499 0.83346 0.82650 0.90021 0.88583 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 10.85 101.05 1.10 1.05 16 2 O -0.38 -0.16 10.71 -35.23 -0.38 -0.54 16 3 C 0.06 -0.08 4.31 -25.92 -0.11 -0.19 16 4 H 0.09 -0.20 7.87 -51.93 -0.41 -0.60 16 5 C -0.17 0.31 7.34 -25.92 -0.19 0.12 16 6 C 0.13 -0.10 4.21 -67.12 -0.28 -0.38 16 7 H 0.13 0.10 7.23 -51.93 -0.38 -0.28 16 8 N -0.60 0.83 3.08 -173.01 -0.53 0.30 16 9 C 0.07 -0.34 8.85 59.84 0.53 0.19 16 10 C 0.52 0.63 7.75 -10.98 -0.09 0.55 16 11 O -0.50 -3.17 15.98 -14.36 -0.23 -3.40 16 12 C 0.03 -0.07 3.78 36.01 0.14 0.07 16 13 O -0.25 -0.60 7.68 -49.78 -0.38 -0.98 16 14 C 0.20 0.14 6.67 -39.21 -0.26 -0.12 16 15 C -0.08 -0.21 6.87 -79.80 -0.55 -0.76 16 16 N 0.03 0.19 4.45 34.03 0.15 0.34 16 17 O -0.18 -1.29 18.45 -29.46 -0.54 -1.83 16 18 O -0.12 -1.02 17.24 -36.49 -0.63 -1.65 16 19 C 0.01 0.00 9.11 -39.60 -0.36 -0.36 16 20 C -0.16 0.34 5.39 -104.60 -0.56 -0.22 16 21 C -0.07 0.19 2.82 36.00 0.10 0.29 16 22 O -0.52 0.36 12.77 -35.23 -0.45 -0.09 16 23 Si 0.69 -2.60 29.78 -169.99 -5.06 -7.66 16 24 C -0.02 0.09 8.66 -39.61 -0.34 -0.25 16 25 C -0.21 0.71 9.04 -39.43 -0.36 0.35 16 26 C -0.15 0.18 7.45 -25.92 -0.19 -0.01 16 27 H 0.04 -0.10 8.14 -51.93 -0.42 -0.52 16 28 H 0.04 -0.10 8.14 -51.93 -0.42 -0.52 16 29 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 30 H 0.10 -0.22 6.72 -51.92 -0.35 -0.57 16 31 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 32 H 0.06 -0.39 8.14 -51.93 -0.42 -0.81 16 33 H 0.08 -0.42 6.34 -51.93 -0.33 -0.75 16 34 H 0.07 -0.52 6.43 -51.93 -0.33 -0.85 16 35 H 0.10 -0.54 7.63 -51.93 -0.40 -0.94 16 36 H 0.10 -0.52 6.91 -51.93 -0.36 -0.88 16 37 H 0.16 0.08 7.61 -52.49 -0.40 -0.32 16 38 H 0.13 -0.42 7.96 -51.93 -0.41 -0.83 16 39 H 0.38 -1.36 8.70 45.56 0.40 -0.97 16 40 H -0.26 0.59 7.11 56.52 0.40 0.99 16 41 H -0.25 -0.02 7.11 56.52 0.40 0.38 16 42 H 0.15 -0.99 4.87 -52.48 -0.26 -1.24 16 43 H 0.16 -1.08 6.30 -52.49 -0.33 -1.41 16 44 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 45 H 0.10 -0.13 6.92 -51.93 -0.36 -0.49 16 LS Contribution 377.81 15.07 5.69 5.69 Total: 0.00 -12.36 377.81 -9.44 -21.80 By element: Atomic # 1 Polarization: -6.66 SS G_CDS: -5.65 Total: -12.31 kcal Atomic # 6 Polarization: 1.77 SS G_CDS: -1.43 Total: 0.33 kcal Atomic # 7 Polarization: 1.02 SS G_CDS: -0.38 Total: 0.63 kcal Atomic # 8 Polarization: -5.88 SS G_CDS: -2.61 Total: -8.49 kcal Atomic # 14 Polarization: -2.60 SS G_CDS: -5.06 Total: -7.66 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -12.36 -9.44 -21.80 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10122440_4549638.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.664 kcal (2) G-P(sol) polarization free energy of solvation -12.359 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.023 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.444 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.803 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.466 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds