Wall clock time and date at job start Sat Mar 6 2021 11:30:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35989 * 116.99874 * 2 1 4 4 C 1.38674 * 119.99867 * 179.97438 * 3 2 1 5 5 C 1.38157 * 119.99995 * 180.02562 * 4 3 2 6 6 C 1.50694 * 120.00206 * 180.02562 * 5 4 3 7 7 O 1.42900 * 109.47063 * 254.97808 * 6 5 4 8 8 Si 1.86299 * 109.47184 * 14.97925 * 6 5 4 9 9 C 1.38681 * 119.99856 * 359.97438 * 5 4 3 10 10 O 1.35981 * 119.99920 * 179.97438 * 9 5 4 11 11 C 1.42898 * 116.99627 * 180.02562 * 10 9 5 12 12 C 1.50704 * 109.46877 * 180.02562 * 11 10 9 13 13 O 1.21286 * 119.99878 * 0.02562 * 12 11 10 14 14 N 1.34777 * 120.00127 * 180.02562 * 12 11 10 15 15 C 1.46495 * 119.99955 * 0.02562 * 14 12 11 16 16 C 1.46496 * 120.00037 * 180.02562 * 14 12 11 17 17 H 1.09004 * 112.90889 * 11.24837 * 16 14 12 18 18 C 1.53784 * 113.61524 * 142.50195 * 16 14 12 19 19 C 1.53778 * 87.08081 * 139.98080 * 18 16 14 20 20 H 1.09004 * 113.61886 * 89.12045 * 19 18 16 21 21 O 1.42901 * 113.61528 * 220.02113 * 19 18 16 22 22 C 1.42906 * 114.00005 * 247.49756 * 21 19 18 23 23 C 1.53778 * 87.08449 * 334.56700 * 19 18 16 24 24 C 1.38723 * 119.99894 * 0.28023 * 9 5 4 25 25 C 1.38110 * 120.00024 * 359.44422 * 24 9 5 26 26 H 1.08997 * 109.47194 * 179.97438 * 1 2 3 27 27 H 1.09001 * 109.47280 * 300.00644 * 1 2 3 28 28 H 1.09001 * 109.46777 * 60.00142 * 1 2 3 29 29 H 1.07999 * 120.00033 * 0.04845 * 4 3 2 30 30 H 1.08999 * 109.47111 * 134.97910 * 6 5 4 31 31 H 0.96698 * 113.99794 * 299.99795 * 7 6 5 32 32 H 1.48498 * 110.00004 * 298.68320 * 8 6 5 33 33 H 1.48505 * 110.00160 * 60.00019 * 8 6 5 34 34 H 1.09000 * 109.47475 * 60.00971 * 11 10 9 35 35 H 1.08993 * 109.47638 * 300.00166 * 11 10 9 36 36 H 1.09003 * 109.47373 * 269.99924 * 15 14 12 37 37 H 1.08997 * 109.47257 * 29.99607 * 15 14 12 38 38 H 1.08999 * 109.47655 * 150.00217 * 15 14 12 39 39 H 1.08993 * 113.61313 * 254.52676 * 18 16 14 40 40 H 1.09000 * 113.61578 * 25.43408 * 18 16 14 41 41 H 1.09000 * 109.46918 * 59.99438 * 22 21 19 42 42 H 1.09002 * 109.46990 * 179.97438 * 22 21 19 43 43 H 1.08996 * 109.47030 * 299.99892 * 22 21 19 44 44 H 1.08998 * 113.61879 * 270.88747 * 23 19 18 45 45 H 1.08999 * 113.61887 * 139.97854 * 23 19 18 46 46 H 1.07997 * 120.00010 * 179.70027 * 24 9 5 47 47 H 1.07994 * 120.00057 * 180.30224 * 25 24 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 3.4312 1.2843 0.0005 5 6 4.0584 2.5153 0.0011 6 6 5.5633 2.5942 0.0011 7 8 6.0207 2.9673 1.3025 8 14 6.2723 0.9325 -0.4537 9 6 3.3030 3.6783 0.0005 10 8 3.9204 4.8899 0.0016 11 6 3.0804 6.0459 0.0015 12 6 3.9345 7.2875 0.0021 13 8 5.1436 7.1918 0.0021 14 7 3.3549 8.5043 0.0027 15 6 1.8945 8.6199 0.0033 16 6 4.1852 9.7112 0.0027 17 1 5.2370 9.5026 -0.1936 18 6 3.6131 10.8526 -0.8545 19 6 4.0662 11.8109 0.2596 20 1 5.0853 12.1765 0.1336 21 8 3.1301 12.8559 0.5316 22 6 3.5944 14.1594 0.1748 23 6 3.9544 10.6177 1.2233 24 6 1.9177 3.6057 0.0053 25 6 1.2907 2.3751 -0.0010 26 1 -0.3633 -1.0276 -0.0005 27 1 -0.3634 0.5139 0.8899 28 1 -0.3633 0.5138 -0.8900 29 1 4.0194 0.3785 0.0002 30 1 5.8880 3.3389 -0.7255 31 1 5.6900 3.8242 1.6049 32 1 5.8629 -0.0855 0.5470 33 1 5.8040 0.5331 -1.8052 34 1 2.4505 6.0375 0.8911 35 1 2.4517 6.0383 -0.8888 36 1 1.5319 8.6489 -1.0242 37 1 1.4622 7.7613 0.5170 38 1 1.6027 9.5357 0.5174 39 1 4.1412 10.9979 -1.7968 40 1 2.5310 10.8063 -0.9773 41 1 3.8083 14.1891 -0.8936 42 1 2.8268 14.8961 0.4120 43 1 4.5022 14.3873 0.7335 44 1 2.9657 10.5071 1.6686 45 1 4.7581 10.5733 1.9584 46 1 1.3295 4.5114 0.0098 47 1 0.2123 2.3186 -0.0021 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10122440_4974302.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:30:31 Heat of formation + Delta-G solvation = -110.082856 kcal Electronic energy + Delta-G solvation = -29645.034738 eV Core-core repulsion = 25376.484562 eV Total energy + Delta-G solvation = -4268.550177 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -42.00865 -41.46047 -40.35060 -39.63343 -38.19769 -37.48162 -36.99546 -35.27189 -32.93637 -31.19067 -29.66668 -28.26852 -28.07874 -27.61270 -26.75272 -26.65032 -25.13195 -23.63208 -22.50463 -21.19793 -20.16818 -19.70399 -18.99607 -18.33452 -18.27950 -17.99009 -17.67247 -17.45687 -16.93989 -16.78154 -16.36645 -16.27928 -16.07472 -15.82232 -15.64403 -15.36019 -15.26494 -14.98863 -14.50490 -14.26546 -14.12146 -13.97590 -13.69498 -13.55835 -13.47052 -13.31660 -13.19771 -13.05880 -12.73755 -12.60868 -12.36681 -12.27087 -12.23259 -11.93807 -11.82850 -11.56063 -11.30263 -11.13353 -10.95931 -10.49761 -10.25670 -9.77990 -8.95572 -4.87425 -0.08681 0.19452 1.29624 1.32447 1.34390 1.58374 1.88985 2.19984 2.33065 2.41011 2.89753 3.22224 3.42360 3.45672 3.47457 3.56933 3.76098 3.79705 3.82951 3.84702 3.95782 3.98428 4.01368 4.09526 4.19623 4.25613 4.28399 4.32538 4.32928 4.48822 4.53948 4.55039 4.59165 4.67019 4.67228 4.67734 4.80835 4.85228 4.87856 4.92089 4.92895 4.99152 5.04641 5.05804 5.26829 5.41478 6.02128 6.18777 6.24233 6.30992 6.52212 6.94145 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.341 6.341 3 C 0.089 3.911 4 C -0.142 4.142 5 C -0.118 4.118 6 C -0.086 4.086 7 O -0.544 6.544 8 Si 0.813 3.187 9 C 0.097 3.903 10 O -0.310 6.310 11 C 0.039 3.961 12 C 0.512 3.488 13 O -0.567 6.567 14 N -0.595 5.595 15 C 0.058 3.942 16 C 0.119 3.881 17 H 0.105 0.895 18 C -0.155 4.155 19 C 0.062 3.938 20 H 0.100 0.900 21 O -0.394 6.394 22 C 0.023 3.977 23 C -0.145 4.145 24 C -0.154 4.154 25 C -0.158 4.158 26 H 0.114 0.886 27 H 0.069 0.931 28 H 0.070 0.930 29 H 0.124 0.876 30 H 0.078 0.922 31 H 0.372 0.628 32 H -0.286 1.286 33 H -0.266 1.266 34 H 0.125 0.875 35 H 0.122 0.878 36 H 0.078 0.922 37 H 0.097 0.903 38 H 0.086 0.914 39 H 0.080 0.920 40 H 0.104 0.896 41 H 0.050 0.950 42 H 0.093 0.907 43 H 0.049 0.951 44 H 0.099 0.901 45 H 0.076 0.924 46 H 0.174 0.826 47 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.251 5.131 -1.641 9.034 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.256 6.256 3 C 0.044 3.956 4 C -0.160 4.160 5 C -0.119 4.119 6 C -0.193 4.193 7 O -0.350 6.350 8 Si 0.714 3.286 9 C 0.051 3.949 10 O -0.224 6.224 11 C -0.038 4.038 12 C 0.300 3.700 13 O -0.445 6.445 14 N -0.328 5.328 15 C -0.083 4.083 16 C 0.015 3.985 17 H 0.123 0.877 18 C -0.193 4.193 19 C 0.004 3.996 20 H 0.118 0.882 21 O -0.313 6.313 22 C -0.073 4.073 23 C -0.184 4.184 24 C -0.173 4.173 25 C -0.176 4.176 26 H 0.133 0.867 27 H 0.088 0.912 28 H 0.089 0.911 29 H 0.142 0.858 30 H 0.096 0.904 31 H 0.220 0.780 32 H -0.213 1.213 33 H -0.192 1.192 34 H 0.142 0.858 35 H 0.140 0.860 36 H 0.096 0.904 37 H 0.116 0.884 38 H 0.105 0.895 39 H 0.099 0.901 40 H 0.123 0.877 41 H 0.068 0.932 42 H 0.112 0.888 43 H 0.067 0.933 44 H 0.118 0.882 45 H 0.094 0.906 46 H 0.191 0.809 47 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges -6.407 3.537 -1.819 7.541 hybrid contribution -1.347 1.273 0.147 1.859 sum -7.754 4.810 -1.672 9.276 Atomic orbital electron populations 1.23391 0.75959 1.05732 1.02647 1.86082 1.23877 1.26630 1.89002 1.18988 0.91696 0.85638 0.99322 1.20155 0.92881 0.96855 1.06109 1.19557 0.96845 0.90563 1.04972 1.25395 0.91149 1.14249 0.88551 1.86651 1.73913 1.42267 1.32206 0.92487 0.89992 0.69749 0.76399 1.18707 0.91611 0.84239 1.00306 1.86090 1.35374 1.11656 1.89247 1.22786 0.92648 0.81836 1.06535 1.20518 0.88237 0.85195 0.76013 1.90752 1.16424 1.86990 1.50330 1.47716 1.08587 1.04124 1.72364 1.22227 0.76787 1.05303 1.03990 1.22273 0.96182 0.82478 0.97539 0.87670 1.23907 1.03281 0.93724 0.98409 1.23514 0.93522 0.86592 0.95986 0.88203 1.87899 1.42427 1.16201 1.84778 1.22959 1.00813 0.83649 0.99845 1.23682 1.03888 0.93533 0.97265 1.21455 0.92115 1.00028 1.03672 1.21433 1.01702 0.90639 1.03867 0.86744 0.91193 0.91121 0.85813 0.90407 0.78005 1.21339 1.19225 0.85785 0.85994 0.90361 0.88434 0.89495 0.90132 0.87728 0.93177 0.88828 0.93264 0.88244 0.90566 0.80900 0.81612 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.06 16 2 O -0.34 -2.17 10.50 -93.43 -0.98 -3.15 16 3 C 0.09 0.59 6.69 22.49 0.15 0.74 16 4 C -0.14 -1.41 8.59 22.35 0.19 -1.22 16 5 C -0.12 -1.04 5.28 -19.78 -0.10 -1.15 16 6 C -0.09 -0.73 2.33 71.23 0.17 -0.56 16 7 O -0.54 -5.57 12.65 -148.98 -1.89 -7.46 16 8 Si 0.81 4.75 30.40 68.60 2.09 6.84 16 9 C 0.10 0.46 6.62 22.49 0.15 0.61 16 10 O -0.31 -1.52 8.56 -74.30 -0.64 -2.16 16 11 C 0.04 -0.13 3.77 71.24 0.27 0.14 16 12 C 0.51 1.53 7.75 87.66 0.68 2.21 16 13 O -0.57 -7.57 15.98 15.99 0.26 -7.32 16 14 N -0.59 1.41 3.08 -819.63 -2.53 -1.12 16 15 C 0.06 -0.60 8.84 127.77 1.13 0.53 16 16 C 0.12 -0.09 4.20 45.52 0.19 0.10 16 17 H 0.11 0.37 7.24 -2.39 -0.02 0.35 16 18 C -0.15 0.53 7.34 31.12 0.23 0.76 16 19 C 0.06 -0.13 4.31 31.12 0.13 0.01 16 20 H 0.10 -0.38 7.87 -2.38 -0.02 -0.39 16 21 O -0.39 -0.36 10.71 -148.98 -1.60 -1.96 16 22 C 0.02 -0.08 10.85 113.37 1.23 1.15 16 23 C -0.15 0.26 7.45 31.12 0.23 0.49 16 24 C -0.15 0.19 9.03 22.36 0.20 0.39 16 25 C -0.16 -0.02 9.03 22.36 0.20 0.19 16 26 H 0.11 -0.70 8.14 -2.39 -0.02 -0.72 16 27 H 0.07 -0.43 7.66 -2.39 -0.02 -0.45 16 28 H 0.07 -0.45 7.66 -2.39 -0.02 -0.47 16 29 H 0.12 1.42 4.93 -2.91 -0.01 1.40 16 30 H 0.08 0.63 7.82 -2.39 -0.02 0.62 16 31 H 0.37 2.86 8.60 -74.06 -0.64 2.22 16 32 H -0.29 -3.24 6.81 99.48 0.68 -2.56 16 33 H -0.27 -2.21 7.11 99.48 0.71 -1.50 16 34 H 0.12 -1.19 6.91 -2.39 -0.02 -1.21 16 35 H 0.12 -1.12 7.64 -2.39 -0.02 -1.13 16 36 H 0.08 -0.97 8.14 -2.39 -0.02 -0.99 16 37 H 0.10 -1.47 6.44 -2.39 -0.02 -1.48 16 38 H 0.09 -0.90 6.34 -2.39 -0.02 -0.92 16 39 H 0.08 -0.30 8.14 -2.39 -0.02 -0.31 16 40 H 0.10 -0.49 6.72 -2.39 -0.02 -0.51 16 41 H 0.05 -0.24 8.14 -2.39 -0.02 -0.26 16 42 H 0.09 -0.45 8.14 -2.39 -0.02 -0.47 16 43 H 0.05 -0.22 8.14 -2.39 -0.02 -0.24 16 44 H 0.10 -0.25 6.92 -2.39 -0.02 -0.26 16 45 H 0.08 -0.06 8.14 -2.39 -0.02 -0.08 16 46 H 0.17 -1.70 6.29 -2.91 -0.02 -1.72 16 47 H 0.17 -1.07 6.29 -2.91 -0.02 -1.09 16 Total: 0.00 -24.31 380.02 1.25 -23.06 By element: Atomic # 1 Polarization: -12.55 SS G_CDS: 0.37 Total: -12.18 kcal Atomic # 6 Polarization: -0.73 SS G_CDS: 6.16 Total: 5.43 kcal Atomic # 7 Polarization: 1.41 SS G_CDS: -2.53 Total: -1.12 kcal Atomic # 8 Polarization: -17.19 SS G_CDS: -4.84 Total: -22.04 kcal Atomic # 14 Polarization: 4.75 SS G_CDS: 2.09 Total: 6.84 kcal Total: -24.31 1.25 -23.06 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10122440_4974302.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.019 kcal (2) G-P(sol) polarization free energy of solvation -24.314 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.333 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.250 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.064 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.083 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds