Wall clock time and date at job start Sat Mar 6 2021 11:31:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.42899 * 114.00078 * 2 1 4 4 H 1.08996 * 112.90761 * 341.24502 * 3 2 1 5 5 C 1.53775 * 113.61519 * 112.50507 * 3 2 1 6 6 C 1.53781 * 87.08329 * 139.97852 * 5 3 2 7 7 H 1.08999 * 113.69164 * 89.12826 * 6 5 3 8 8 N 1.46500 * 113.61351 * 220.01499 * 6 5 3 9 9 C 1.46502 * 119.99764 * 37.50196 * 8 6 5 10 10 C 1.34777 * 119.99890 * 217.49523 * 8 6 5 11 11 O 1.21277 * 120.00276 * 0.02562 * 10 8 6 12 12 C 1.50698 * 119.99538 * 180.02562 * 10 8 6 13 13 N 1.46509 * 109.47085 * 179.97438 * 12 10 8 14 14 C 1.36824 * 125.06514 * 265.00565 * 13 12 10 15 15 C 1.34236 * 109.93935 * 179.97438 * 14 13 12 16 16 C 1.50702 * 126.50319 * 179.97438 * 15 14 13 17 17 O 1.42900 * 109.47362 * 254.97724 * 16 15 14 18 18 Si 1.86305 * 109.47038 * 14.97261 * 16 15 14 19 19 C 1.46493 * 106.99702 * 359.97438 * 15 14 13 20 20 C 1.39593 * 134.03132 * 179.97438 * 19 15 14 21 21 C 1.36656 * 119.76054 * 180.02562 * 20 19 15 22 22 C 1.38788 * 120.53190 * 0.02562 * 21 20 19 23 23 C 1.37793 * 120.66312 * 0.02562 * 22 21 20 24 24 C 1.37692 * 125.05901 * 84.99689 * 13 12 10 25 25 C 1.53781 * 87.08108 * 334.56497 * 6 5 3 26 26 H 1.09004 * 109.47603 * 300.00065 * 1 2 3 27 27 H 1.09004 * 109.47536 * 60.00240 * 1 2 3 28 28 H 1.09001 * 109.47606 * 180.02562 * 1 2 3 29 29 H 1.09001 * 113.61636 * 25.42337 * 5 3 2 30 30 H 1.09006 * 113.61338 * 254.52989 * 5 3 2 31 31 H 1.09011 * 109.46966 * 269.99169 * 9 8 6 32 32 H 1.08999 * 109.47698 * 29.99434 * 9 8 6 33 33 H 1.09002 * 109.46840 * 149.99839 * 9 8 6 34 34 H 1.09000 * 109.47419 * 60.00451 * 12 10 8 35 35 H 1.08993 * 109.47565 * 299.99774 * 12 10 8 36 36 H 1.07999 * 125.03296 * 359.97438 * 14 13 12 37 37 H 1.08994 * 109.47235 * 134.97198 * 16 15 14 38 38 H 0.96705 * 114.00137 * 59.99472 * 17 16 15 39 39 H 1.48494 * 110.00215 * 179.97438 * 18 16 15 40 40 H 1.48502 * 109.99968 * 301.32495 * 18 16 15 41 41 H 1.08003 * 120.11889 * 359.97438 * 20 19 15 42 42 H 1.08004 * 119.73127 * 179.97438 * 21 20 19 43 43 H 1.07995 * 119.67042 * 179.97438 * 22 21 20 44 44 H 1.08001 * 120.10544 * 180.27771 * 23 22 21 45 45 H 1.08993 * 113.61345 * 139.97823 * 25 6 5 46 46 H 1.08997 * 113.61371 * 270.88684 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3143 2.0797 -0.3228 5 6 2.7534 1.6488 1.3017 6 6 3.8227 2.3180 0.4221 7 1 3.6236 3.3693 0.2142 8 7 5.1935 2.0785 0.8803 9 6 5.5625 0.7743 1.4362 10 6 6.1149 3.0579 0.7903 11 8 5.8093 4.1377 0.3304 12 6 7.5251 2.8112 1.2611 13 7 8.3265 4.0207 1.0574 14 6 9.1127 4.2680 -0.0348 15 6 9.7097 5.4636 0.0923 16 6 10.6538 6.1033 -0.8928 17 8 11.9911 6.0161 -0.3967 18 14 10.5393 5.2175 -2.5278 19 6 9.2695 6.0284 1.3702 20 6 9.5372 7.2188 2.0485 21 6 8.9518 7.4553 3.2605 22 6 8.0934 6.5211 3.8231 23 6 7.8161 5.3392 3.1713 24 6 8.4006 5.0777 1.9366 25 6 3.3756 1.3718 -0.7046 26 1 -0.3634 0.5138 0.8900 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3634 -1.0276 0.0005 29 1 3.1165 0.7740 1.8410 30 1 2.2140 2.3477 1.9411 31 1 5.3974 0.7787 2.5138 32 1 4.9504 -0.0025 0.9780 33 1 6.6145 0.5763 1.2307 34 1 7.9591 1.9884 0.6931 35 1 7.5150 2.5559 2.3206 36 1 9.2348 3.6003 -0.8747 37 1 10.3837 7.1506 -1.0274 38 1 12.2991 5.1108 -0.2529 39 1 11.4651 5.8393 -3.5083 40 1 10.8742 3.7815 -2.3521 41 1 10.2052 7.9498 1.6173 42 1 9.1596 8.3762 3.7851 43 1 7.6387 6.7222 4.7819 44 1 7.1432 4.6206 3.6153 45 1 3.3384 1.8469 -1.6848 46 1 3.9088 0.4212 -0.7137 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10122440_9818708.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:31:08 Heat of formation + Delta-G solvation = 3.528763 kcal Electronic energy + Delta-G solvation = -28541.022355 eV Core-core repulsion = 24592.884940 eV Total energy + Delta-G solvation = -3948.137415 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.162 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -42.58103 -41.40756 -39.85038 -38.16299 -37.78970 -37.40216 -35.28643 -33.97743 -31.46051 -30.25248 -29.14508 -28.21066 -27.62469 -26.73887 -26.09672 -24.72220 -23.67943 -22.63184 -21.25920 -20.64433 -20.11219 -18.80148 -18.47572 -17.96151 -17.69051 -17.32875 -16.84809 -16.72022 -16.41794 -16.31513 -16.01462 -15.91412 -15.51994 -15.12212 -15.04263 -14.75513 -14.73975 -14.27424 -14.25827 -14.07780 -13.68374 -13.53773 -13.26915 -13.25648 -13.05745 -12.72965 -12.71010 -12.57902 -12.40860 -12.25746 -12.00945 -11.92030 -11.82217 -11.74095 -11.09408 -10.55700 -10.48965 -10.45266 -9.73132 -9.17178 -8.64584 -4.86453 0.13151 0.62906 1.34762 1.36495 1.39789 1.58084 1.65853 1.96710 2.00539 2.88807 2.94167 3.30583 3.48622 3.49767 3.53722 3.62983 3.68531 3.78053 3.81782 3.85411 3.98520 4.06554 4.20617 4.23625 4.27512 4.29690 4.48740 4.49616 4.53721 4.58374 4.61815 4.68357 4.69042 4.70939 4.77855 4.82391 4.88095 4.89135 4.93029 4.95613 5.06824 5.12877 5.44455 5.50126 5.65612 5.72864 5.74393 6.13598 6.20755 6.23591 6.32177 6.60273 6.98799 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.394 6.394 3 C 0.061 3.939 4 H 0.098 0.902 5 C -0.156 4.156 6 C 0.120 3.880 7 H 0.102 0.898 8 N -0.596 5.596 9 C 0.060 3.940 10 C 0.492 3.508 11 O -0.567 6.567 12 C 0.090 3.910 13 N -0.467 5.467 14 C 0.073 3.927 15 C -0.213 4.213 16 C -0.050 4.050 17 O -0.552 6.552 18 Si 0.763 3.237 19 C -0.115 4.115 20 C -0.087 4.087 21 C -0.153 4.153 22 C -0.106 4.106 23 C -0.135 4.135 24 C 0.091 3.909 25 C -0.143 4.143 26 H 0.049 0.951 27 H 0.049 0.951 28 H 0.093 0.907 29 H 0.104 0.896 30 H 0.077 0.923 31 H 0.074 0.926 32 H 0.085 0.915 33 H 0.100 0.900 34 H 0.159 0.841 35 H 0.140 0.860 36 H 0.196 0.804 37 H 0.104 0.896 38 H 0.384 0.616 39 H -0.301 1.301 40 H -0.260 1.260 41 H 0.120 0.880 42 H 0.137 0.863 43 H 0.145 0.855 44 H 0.130 0.870 45 H 0.076 0.924 46 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.133 -7.585 1.327 8.739 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.313 6.313 3 C 0.003 3.997 4 H 0.116 0.884 5 C -0.194 4.194 6 C 0.016 3.984 7 H 0.120 0.880 8 N -0.328 5.328 9 C -0.082 4.082 10 C 0.279 3.721 11 O -0.445 6.445 12 C -0.034 4.034 13 N -0.149 5.149 14 C -0.052 4.052 15 C -0.221 4.221 16 C -0.158 4.158 17 O -0.360 6.360 18 Si 0.666 3.334 19 C -0.119 4.119 20 C -0.106 4.106 21 C -0.172 4.172 22 C -0.125 4.125 23 C -0.155 4.155 24 C -0.014 4.014 25 C -0.181 4.181 26 H 0.067 0.933 27 H 0.067 0.933 28 H 0.112 0.888 29 H 0.122 0.878 30 H 0.095 0.905 31 H 0.093 0.907 32 H 0.103 0.897 33 H 0.118 0.882 34 H 0.177 0.823 35 H 0.158 0.842 36 H 0.213 0.787 37 H 0.122 0.878 38 H 0.233 0.767 39 H -0.229 1.229 40 H -0.185 1.185 41 H 0.138 0.862 42 H 0.155 0.845 43 H 0.163 0.837 44 H 0.148 0.852 45 H 0.095 0.905 46 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -3.986 -7.321 0.496 8.351 hybrid contribution 0.435 0.166 0.769 0.899 sum -3.551 -7.155 1.264 8.088 Atomic orbital electron populations 1.22952 0.79847 1.03725 1.00730 1.87897 1.21119 1.27586 1.94680 1.23525 0.94037 0.85589 0.96570 0.88401 1.23903 0.96490 1.01431 0.97613 1.22206 0.80631 0.99729 0.95809 0.88019 1.47833 1.09303 1.13973 1.61708 1.22200 1.03275 0.82881 0.99827 1.21416 0.88339 0.83879 0.78454 1.90779 1.81234 1.26099 1.46429 1.22009 0.87543 0.87070 1.06788 1.43467 1.38920 1.15933 1.16613 1.22003 0.93952 0.97731 0.91543 1.20703 1.06912 0.96904 0.97560 1.24570 0.80574 1.06340 1.04348 1.86562 1.29039 1.33508 1.86917 0.94038 0.89019 0.76686 0.73638 1.19337 1.00801 0.95643 0.96166 1.20460 0.99390 0.95595 0.95125 1.20922 0.99297 1.00827 0.96174 1.21130 0.98053 0.92918 1.00442 1.20235 1.02528 0.99497 0.93257 1.18401 1.00322 0.89051 0.93637 1.23660 0.95364 1.00589 0.98517 0.93274 0.93261 0.88828 0.87807 0.90460 0.90717 0.89679 0.88200 0.82332 0.84217 0.78706 0.87797 0.76740 1.22851 1.18491 0.86223 0.84501 0.83677 0.85171 0.90532 0.88186 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 10.85 113.37 1.23 1.15 16 2 O -0.39 -0.26 10.71 -148.98 -1.60 -1.85 16 3 C 0.06 -0.15 4.31 31.12 0.13 -0.01 16 4 H 0.10 -0.38 7.87 -2.39 -0.02 -0.40 16 5 C -0.16 0.57 7.34 31.12 0.23 0.80 16 6 C 0.12 -0.19 4.21 45.52 0.19 0.00 16 7 H 0.10 0.32 7.23 -2.39 -0.02 0.30 16 8 N -0.60 2.32 3.08 -819.63 -2.53 -0.21 16 9 C 0.06 -0.68 8.84 127.77 1.13 0.45 16 10 C 0.49 0.34 7.74 87.66 0.68 1.02 16 11 O -0.57 -6.39 15.90 -3.02 -0.05 -6.44 16 12 C 0.09 -0.49 5.03 85.63 0.43 -0.05 16 13 N -0.47 -1.25 2.27 -520.00 -1.18 -2.43 16 14 C 0.07 0.15 9.89 83.00 0.82 0.97 16 15 C -0.21 -1.31 5.58 -18.62 -0.10 -1.42 16 16 C -0.05 -0.22 3.06 71.24 0.22 0.00 16 17 O -0.55 -3.76 12.88 -148.98 -1.92 -5.68 16 18 Si 0.76 0.03 30.82 68.60 2.11 2.15 16 19 C -0.12 -1.18 6.35 -20.20 -0.13 -1.31 16 20 C -0.09 -0.85 10.05 22.23 0.22 -0.63 16 21 C -0.15 -1.05 9.97 22.03 0.22 -0.83 16 22 C -0.11 -0.56 10.01 22.30 0.22 -0.34 16 23 C -0.13 -0.79 10.00 22.37 0.22 -0.57 16 24 C 0.09 0.72 6.80 39.03 0.27 0.98 16 25 C -0.14 0.39 7.45 31.12 0.23 0.62 16 26 H 0.05 -0.23 8.14 -2.38 -0.02 -0.25 16 27 H 0.05 -0.23 8.14 -2.39 -0.02 -0.25 16 28 H 0.09 -0.47 8.14 -2.39 -0.02 -0.49 16 29 H 0.10 -0.50 6.72 -2.39 -0.02 -0.52 16 30 H 0.08 -0.27 8.14 -2.38 -0.02 -0.29 16 31 H 0.07 -0.96 8.14 -2.38 -0.02 -0.98 16 32 H 0.08 -0.95 6.34 -2.39 -0.02 -0.96 16 33 H 0.10 -1.63 6.44 -2.39 -0.02 -1.65 16 34 H 0.16 -2.09 7.38 -2.39 -0.02 -2.11 16 35 H 0.14 -1.38 8.11 -2.39 -0.02 -1.40 16 36 H 0.20 -0.92 6.27 -2.91 -0.02 -0.94 16 37 H 0.10 0.56 7.96 -2.39 -0.02 0.55 16 38 H 0.38 0.06 8.70 -74.05 -0.64 -0.58 16 39 H -0.30 -2.28 7.11 99.48 0.71 -1.57 16 40 H -0.26 0.00 7.00 99.48 0.70 0.70 16 41 H 0.12 1.04 8.06 -2.91 -0.02 1.01 16 42 H 0.14 0.36 8.06 -2.91 -0.02 0.33 16 43 H 0.15 0.01 8.06 -2.91 -0.02 -0.02 16 44 H 0.13 0.19 8.06 -2.91 -0.02 0.16 16 45 H 0.08 -0.15 8.14 -2.39 -0.02 -0.17 16 46 H 0.10 -0.35 6.92 -2.39 -0.02 -0.37 16 Total: 0.00 -24.92 378.27 1.44 -23.49 By element: Atomic # 1 Polarization: -10.25 SS G_CDS: 0.38 Total: -9.87 kcal Atomic # 6 Polarization: -5.38 SS G_CDS: 6.22 Total: 0.84 kcal Atomic # 7 Polarization: 1.07 SS G_CDS: -3.71 Total: -2.63 kcal Atomic # 8 Polarization: -10.41 SS G_CDS: -3.56 Total: -13.97 kcal Atomic # 14 Polarization: 0.03 SS G_CDS: 2.11 Total: 2.15 kcal Total: -24.92 1.44 -23.49 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10122440_9818708.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.016 kcal (2) G-P(sol) polarization free energy of solvation -24.924 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 2.092 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.437 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.487 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.529 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds