Wall clock time and date at job start Sat Mar 6 2021 11:48:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86295 * 109.47320 * 2 1 4 4 C 1.50700 * 109.47022 * 120.00452 * 2 1 3 5 5 C 1.34460 * 126.47918 * 254.95245 * 4 2 1 6 6 N 1.36565 * 109.98457 * 180.02562 * 5 4 2 7 7 C 1.37837 * 109.85955 * 0.02562 * 6 5 4 8 8 C 1.38641 * 133.37665 * 180.32584 * 7 6 5 9 9 C 1.39321 * 119.66686 * 180.17740 * 8 7 6 10 10 C 1.47574 * 119.83463 * 179.72576 * 9 8 7 11 11 O 1.21586 * 119.99916 * 359.73401 * 10 9 8 12 12 N 1.34784 * 119.99905 * 179.73025 * 10 9 8 13 13 C 1.46501 * 119.99537 * 180.02562 * 12 10 9 14 14 H 1.08989 * 112.85412 * 336.19964 * 13 12 10 15 15 C 1.53957 * 113.53272 * 107.50853 * 13 12 10 16 16 C 1.53777 * 87.02224 * 89.18541 * 15 13 12 17 17 H 1.08999 * 113.61459 * 270.77078 * 16 15 13 18 18 C 1.50699 * 113.61798 * 139.95059 * 16 15 13 19 19 C 1.38220 * 119.96898 * 140.86490 * 18 16 15 20 20 C 1.38245 * 120.04509 * 179.97438 * 19 18 16 21 21 C 1.38394 * 119.98893 * 0.02562 * 20 19 18 22 22 F 1.35106 * 120.03266 * 180.02562 * 21 20 19 23 23 C 1.38592 * 119.94221 * 359.97438 * 21 20 19 24 24 Cl 1.73594 * 120.02786 * 179.97438 * 23 21 20 25 25 C 1.38262 * 119.96738 * 320.84346 * 18 16 15 26 26 C 1.53777 * 113.60840 * 204.99632 * 13 12 10 27 27 C 1.40200 * 120.32934 * 359.45894 * 9 8 7 28 28 C 1.36235 * 120.38546 * 0.27063 * 27 9 8 29 29 C 1.39875 * 119.95656 * 359.97438 * 28 27 9 30 30 H 0.96695 * 114.00027 * 59.99622 * 1 2 3 31 31 H 1.09006 * 109.46757 * 239.99916 * 2 1 3 32 32 H 1.48499 * 110.00094 * 298.68396 * 3 2 1 33 33 H 1.48508 * 109.99715 * 59.99982 * 3 2 1 34 34 H 1.08002 * 125.00447 * 0.04140 * 5 4 2 35 35 H 0.96997 * 125.06962 * 180.02562 * 6 5 4 36 36 H 1.08006 * 120.17041 * 359.91099 * 8 7 6 37 37 H 0.96996 * 119.99532 * 0.02562 * 12 10 9 38 38 H 1.09004 * 113.66616 * 334.65584 * 15 13 12 39 39 H 1.09000 * 113.61715 * 203.70485 * 15 13 12 40 40 H 1.07993 * 119.97657 * 0.25382 * 19 18 16 41 41 H 1.07997 * 120.00035 * 179.97438 * 20 19 18 42 42 H 1.08000 * 119.99177 * 0.02562 * 25 18 16 43 43 H 1.09005 * 113.61136 * 156.34191 * 26 13 12 44 44 H 1.08995 * 113.69329 * 25.45298 * 26 13 12 45 45 H 1.08003 * 119.81132 * 180.29510 * 27 9 8 46 46 H 1.07996 * 120.02117 * 179.97438 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.4624 -0.1365 2.3242 6 7 2.8045 -1.0949 3.2349 7 6 2.4956 -2.3434 2.7392 8 6 2.6269 -3.6277 3.2444 9 6 2.2140 -4.7157 2.4784 10 6 2.3576 -6.0848 3.0101 11 8 2.8398 -6.2614 4.1122 12 7 1.9542 -7.1394 2.2740 13 6 2.0964 -8.4985 2.8022 14 1 2.8755 -8.5788 3.5601 15 6 0.7596 -9.1396 3.2172 16 6 0.6510 -9.6563 1.7730 17 1 0.1502 -8.9627 1.0976 18 6 0.1141 -11.0609 1.6730 19 6 -0.7624 -11.3943 0.6576 20 6 -1.2555 -12.6824 0.5640 21 6 -0.8719 -13.6388 1.4879 22 9 -1.3529 -14.8980 1.3970 23 6 0.0070 -13.3039 2.5058 24 17 0.4892 -14.5015 3.6662 25 6 0.4991 -12.0148 2.5968 26 6 2.1855 -9.5774 1.7101 27 6 1.6575 -4.5160 1.2071 28 6 1.5197 -3.2570 0.7053 29 6 1.9343 -2.1549 1.4603 30 1 -0.3933 0.4417 -0.7650 31 1 1.7923 -0.5139 -0.8900 32 1 1.5879 2.4585 -1.2242 33 1 1.5615 2.4678 1.2086 34 1 2.5982 0.9261 2.4622 35 1 3.2051 -0.9228 4.1013 36 1 3.0511 -3.7844 4.2252 37 1 1.5699 -6.9984 1.3947 38 1 -0.0104 -8.4144 3.4806 39 1 0.8667 -9.9324 3.9576 40 1 -1.0587 -10.6492 -0.0659 41 1 -1.9407 -12.9421 -0.2294 42 1 1.1839 -11.7530 3.3897 43 1 2.6833 -10.4902 2.0378 44 1 2.5651 -9.2067 0.7581 45 1 1.3358 -5.3651 0.6224 46 1 1.0906 -3.1099 -0.2748 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10156534_12335838.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:48:26 Heat of formation + Delta-G solvation = 3.520680 kcal Electronic energy + Delta-G solvation = -32881.862979 eV Core-core repulsion = 28065.786695 eV Total energy + Delta-G solvation = -4816.076284 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 401.098 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -50.04007 -42.44082 -41.61177 -40.46899 -38.92196 -37.86931 -37.58428 -37.47173 -34.60451 -33.33801 -32.00484 -31.67758 -30.75552 -30.36048 -26.68556 -26.58163 -26.20311 -24.77784 -24.11893 -23.61474 -22.73369 -21.61695 -20.59155 -20.24809 -19.31262 -18.93183 -18.42323 -18.22808 -17.71367 -17.41794 -17.22728 -16.85377 -16.82818 -16.15521 -15.98109 -15.89498 -15.68491 -15.33559 -15.14839 -14.99654 -14.83597 -14.74935 -14.67929 -14.46534 -14.39430 -14.13878 -13.97931 -13.82446 -13.54747 -13.44710 -13.14116 -12.65773 -12.62003 -12.57012 -12.49018 -12.18661 -12.15550 -11.92477 -11.84864 -11.62057 -11.24667 -11.10479 -10.75221 -10.31672 -10.13976 -10.02197 -9.58190 -9.33970 -8.77760 -4.84142 -0.30160 -0.11766 0.02254 0.40659 0.93851 1.36834 1.40789 1.66457 1.88679 1.91902 2.02557 2.25399 2.33765 2.88840 3.03948 3.42162 3.57810 3.58825 3.61452 3.65693 3.71649 3.74783 3.85307 3.94325 4.04939 4.06618 4.11038 4.13264 4.27063 4.31425 4.39847 4.47107 4.53893 4.61408 4.67324 4.78148 4.80012 4.85372 4.86496 4.89574 4.98007 5.00202 5.05919 5.06566 5.18032 5.24865 5.39881 5.44097 5.52684 5.61991 5.63622 5.67919 6.00484 6.49891 6.53164 6.72247 7.17481 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.562 6.562 2 C -0.048 4.048 3 Si 0.766 3.234 4 C -0.190 4.190 5 C 0.086 3.914 6 N -0.578 5.578 7 C 0.066 3.934 8 C -0.068 4.068 9 C -0.135 4.135 10 C 0.565 3.435 11 O -0.582 6.582 12 N -0.692 5.692 13 C 0.113 3.887 14 H 0.085 0.915 15 C -0.146 4.146 16 C -0.061 4.061 17 H 0.128 0.872 18 C -0.064 4.064 19 C -0.074 4.074 20 C -0.139 4.139 21 C 0.077 3.923 22 F -0.143 7.143 23 C -0.087 4.087 24 Cl -0.065 7.065 25 C -0.084 4.084 26 C -0.125 4.125 27 C -0.105 4.105 28 C -0.082 4.082 29 C -0.081 4.081 30 H 0.391 0.609 31 H 0.086 0.914 32 H -0.290 1.290 33 H -0.288 1.288 34 H 0.202 0.798 35 H 0.434 0.566 36 H 0.127 0.873 37 H 0.417 0.583 38 H 0.071 0.929 39 H 0.094 0.906 40 H 0.172 0.828 41 H 0.162 0.838 42 H 0.152 0.848 43 H 0.100 0.900 44 H 0.096 0.904 45 H 0.158 0.842 46 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.582 6.328 -6.851 9.460 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.371 6.371 2 C -0.157 4.157 3 Si 0.670 3.330 4 C -0.197 4.197 5 C -0.043 4.043 6 N -0.181 5.181 7 C -0.041 4.041 8 C -0.090 4.090 9 C -0.139 4.139 10 C 0.354 3.646 11 O -0.463 6.463 12 N -0.344 5.344 13 C 0.007 3.993 14 H 0.103 0.897 15 C -0.185 4.185 16 C -0.079 4.079 17 H 0.146 0.854 18 C -0.065 4.065 19 C -0.091 4.091 20 C -0.158 4.158 21 C 0.057 3.943 22 F -0.122 7.122 23 C -0.114 4.114 24 Cl -0.036 7.036 25 C -0.103 4.103 26 C -0.163 4.163 27 C -0.124 4.124 28 C -0.100 4.100 29 C -0.086 4.086 30 H 0.241 0.759 31 H 0.104 0.896 32 H -0.217 1.217 33 H -0.215 1.215 34 H 0.218 0.782 35 H 0.274 0.726 36 H 0.145 0.855 37 H 0.256 0.744 38 H 0.090 0.910 39 H 0.113 0.887 40 H 0.189 0.811 41 H 0.179 0.821 42 H 0.169 0.831 43 H 0.119 0.881 44 H 0.114 0.886 45 H 0.175 0.825 46 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 1.894 6.569 -5.306 8.654 hybrid contribution -1.257 -0.706 0.127 1.447 sum 0.637 5.863 -5.179 7.848 Atomic orbital electron populations 1.86593 1.19223 1.80567 1.50750 1.24280 0.83319 1.11091 0.97036 0.94240 0.90101 0.71630 0.76982 1.19799 1.10570 0.91213 0.98089 1.22191 0.98403 0.95407 0.88287 1.41773 1.54336 1.03387 1.18648 1.18151 1.03969 0.86775 0.95157 1.20136 1.00007 0.88771 1.00060 1.19458 1.06124 0.91612 0.96755 1.18348 0.76720 0.85392 0.84151 1.90772 1.46668 1.86736 1.22132 1.45416 1.63133 1.04719 1.21131 1.21914 0.98507 0.80947 0.97887 0.89663 1.23621 0.97515 1.00543 0.96799 1.21663 0.96320 0.91774 0.98170 0.85387 1.19894 0.96716 0.95612 0.94259 1.21428 0.94427 0.95584 0.97705 1.21457 1.02266 0.92930 0.99152 1.17841 0.98012 0.80759 0.97666 1.91514 1.86616 1.38186 1.95878 1.21184 1.02550 0.92990 0.94685 1.98400 1.90737 1.56497 1.57961 1.21009 0.99668 0.89352 1.00263 1.23404 0.94950 0.98391 0.99560 1.20929 0.99396 0.98161 0.93950 1.20426 0.98854 0.90499 1.00239 1.19566 1.01029 0.94061 0.93981 0.75919 0.89620 1.21712 1.21538 0.78176 0.72586 0.85468 0.74443 0.91047 0.88728 0.81069 0.82065 0.83061 0.88142 0.88596 0.82454 0.83869 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.64 12.86 -148.98 -1.92 -2.56 16 2 C -0.05 0.10 3.05 71.24 0.22 0.32 16 3 Si 0.77 -3.73 30.79 68.60 2.11 -1.62 16 4 C -0.19 -0.22 5.61 -18.64 -0.10 -0.33 16 5 C 0.09 -0.19 10.43 83.09 0.87 0.68 16 6 N -0.58 0.89 6.07 -187.70 -1.14 -0.25 16 7 C 0.07 0.24 7.26 38.95 0.28 0.52 16 8 C -0.07 -0.35 9.61 22.63 0.22 -0.13 16 9 C -0.14 -0.45 5.87 -20.08 -0.12 -0.57 16 10 C 0.56 2.89 7.76 86.71 0.67 3.56 16 11 O -0.58 -8.00 15.91 -3.99 -0.06 -8.07 16 12 N -0.69 1.96 5.21 -442.88 -2.31 -0.34 16 13 C 0.11 -0.34 4.33 45.58 0.20 -0.14 16 14 H 0.09 0.19 7.46 -2.39 -0.02 0.17 16 15 C -0.15 0.65 7.27 31.18 0.23 0.87 16 16 C -0.06 0.53 3.85 -11.02 -0.04 0.48 16 17 H 0.13 -1.65 8.08 -2.39 -0.02 -1.67 16 18 C -0.06 0.34 5.29 -19.86 -0.11 0.23 16 19 C -0.07 0.47 9.70 22.27 0.22 0.68 16 20 C -0.14 0.32 10.03 22.31 0.22 0.55 16 21 C 0.08 0.28 7.28 22.39 0.16 0.45 16 22 F -0.14 -1.12 16.84 44.97 0.76 -0.36 16 23 C -0.09 -0.28 6.33 22.36 0.14 -0.14 16 24 Cl -0.06 -0.37 28.62 -2.72 -0.08 -0.45 16 25 C -0.08 0.13 8.32 22.29 0.19 0.31 16 26 C -0.13 1.00 7.29 31.12 0.23 1.23 16 27 C -0.10 0.18 9.46 22.28 0.21 0.39 16 28 C -0.08 -0.03 10.03 22.20 0.22 0.19 16 29 C -0.08 -0.29 6.35 -20.14 -0.13 -0.42 16 30 H 0.39 -2.69 8.74 -74.06 -0.65 -3.33 16 31 H 0.09 -0.44 7.96 -2.38 -0.02 -0.46 16 32 H -0.29 -0.03 7.11 99.48 0.71 0.67 16 33 H -0.29 -0.19 7.04 99.48 0.70 0.51 16 34 H 0.20 -1.65 6.30 -2.91 -0.02 -1.67 16 35 H 0.43 -3.10 8.96 -92.71 -0.83 -3.93 16 36 H 0.13 0.75 7.62 -2.91 -0.02 0.72 16 37 H 0.42 -3.93 6.69 -92.71 -0.62 -4.55 16 38 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 39 H 0.09 -0.38 6.39 -2.39 -0.02 -0.40 16 40 H 0.17 -2.18 8.05 -2.91 -0.02 -2.21 16 41 H 0.16 -0.97 8.06 -2.91 -0.02 -0.99 16 42 H 0.15 -0.55 6.72 -2.91 -0.02 -0.57 16 43 H 0.10 -0.75 7.64 -2.38 -0.02 -0.77 16 44 H 0.10 -0.99 8.14 -2.39 -0.02 -1.01 16 45 H 0.16 -1.50 6.36 -2.91 -0.02 -1.52 16 46 H 0.14 -0.46 8.06 -2.91 -0.02 -0.49 16 Total: 0.00 -26.74 404.93 0.17 -26.57 By element: Atomic # 1 Polarization: -20.71 SS G_CDS: -0.97 Total: -21.67 kcal Atomic # 6 Polarization: 4.97 SS G_CDS: 3.77 Total: 8.74 kcal Atomic # 7 Polarization: 2.85 SS G_CDS: -3.45 Total: -0.59 kcal Atomic # 8 Polarization: -8.64 SS G_CDS: -1.98 Total: -10.62 kcal Atomic # 9 Polarization: -1.12 SS G_CDS: 0.76 Total: -0.36 kcal Atomic # 14 Polarization: -3.73 SS G_CDS: 2.11 Total: -1.62 kcal Atomic # 17 Polarization: -0.37 SS G_CDS: -0.08 Total: -0.45 kcal Total: -26.74 0.17 -26.57 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10156534_12335838.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 30.090 kcal (2) G-P(sol) polarization free energy of solvation -26.741 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.349 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.171 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.569 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.521 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds