Wall clock time and date at job start Sat Mar 6 2021 11:49:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86306 * 109.46634 * 2 1 4 4 C 1.50698 * 109.47421 * 119.99852 * 2 1 3 5 5 C 1.38191 * 119.84278 * 254.98214 * 4 2 1 6 6 C 1.38316 * 120.14221 * 179.69828 * 5 4 2 7 7 F 1.35102 * 120.08228 * 180.31632 * 6 5 4 8 8 C 1.39809 * 119.83176 * 0.57451 * 6 5 4 9 9 C 1.47694 * 120.15362 * 179.72191 * 8 6 5 10 10 O 1.21570 * 120.00163 * 359.72243 * 9 8 6 11 11 N 1.34775 * 119.99917 * 179.72513 * 9 8 6 12 12 C 1.46501 * 119.99926 * 179.97438 * 11 9 8 13 13 H 1.09001 * 112.85027 * 336.19927 * 12 11 9 14 14 C 1.53959 * 113.53343 * 107.50810 * 12 11 9 15 15 C 1.53780 * 87.01972 * 89.18746 * 14 12 11 16 16 H 1.08991 * 113.61663 * 270.76847 * 15 14 12 17 17 C 1.50705 * 113.61516 * 139.94872 * 15 14 12 18 18 C 1.38222 * 119.96654 * 321.11908 * 17 15 14 19 19 C 1.38242 * 120.04785 * 180.29436 * 18 17 15 20 20 C 1.38406 * 119.98706 * 359.72557 * 19 18 17 21 21 F 1.35098 * 120.03421 * 180.02562 * 20 19 18 22 22 C 1.38596 * 119.93539 * 359.97438 * 20 19 18 23 23 Cl 1.73601 * 120.02085 * 180.02562 * 22 20 19 24 24 C 1.38251 * 119.96881 * 140.85704 * 17 15 14 25 25 C 1.53777 * 113.61357 * 204.99955 * 12 11 9 26 26 C 1.39653 * 119.68695 * 359.44788 * 8 6 5 27 27 C 1.38066 * 119.85647 * 0.27632 * 26 8 6 28 28 F 1.35101 * 119.92199 * 179.97438 * 27 26 8 29 29 H 0.96703 * 113.99688 * 299.99902 * 1 2 3 30 30 H 1.08996 * 109.47218 * 240.00151 * 2 1 3 31 31 H 1.48498 * 109.99908 * 299.99759 * 3 2 1 32 32 H 1.48503 * 109.99910 * 61.32404 * 3 2 1 33 33 H 1.07992 * 119.92624 * 0.02562 * 5 4 2 34 34 H 0.97001 * 119.99890 * 359.97438 * 11 9 8 35 35 H 1.08994 * 113.66598 * 334.65541 * 14 12 11 36 36 H 1.09004 * 113.60804 * 203.70790 * 14 12 11 37 37 H 1.07996 * 119.98005 * 0.02562 * 18 17 15 38 38 H 1.07994 * 120.01022 * 179.70111 * 19 18 17 39 39 H 1.08002 * 119.99752 * 359.97438 * 24 17 15 40 40 H 1.09004 * 113.61622 * 156.33476 * 25 12 11 41 41 H 1.09004 * 113.69554 * 25.44717 * 25 12 11 42 42 H 1.08007 * 120.06990 * 180.29525 * 26 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.4535 0.0199 2.2811 6 6 2.9106 -0.6253 3.4159 7 9 3.4149 0.0902 4.4450 8 6 2.8545 -2.0201 3.4932 9 6 3.3463 -2.7168 4.6991 10 8 3.8059 -2.0775 5.6254 11 7 3.2856 -4.0611 4.7725 12 6 3.7740 -4.7522 5.9684 13 1 4.5089 -4.1693 6.5237 14 6 2.6494 -5.3302 6.8467 15 6 2.7556 -6.6098 6.0004 16 1 2.1142 -6.6049 5.1192 17 6 2.6341 -7.8779 6.8056 18 6 3.2199 -7.9615 8.0547 19 6 3.1147 -9.1260 8.7921 20 6 2.4175 -10.2073 8.2819 21 9 2.3137 -11.3457 9.0019 22 6 1.8251 -10.1208 7.0319 23 17 0.9495 -11.4754 6.3900 24 6 1.9323 -8.9547 6.2963 25 6 4.2094 -6.2036 5.7065 26 6 2.3259 -2.7512 2.4271 27 6 1.8680 -2.0936 1.3028 28 9 1.3568 -2.7995 0.2705 29 1 -0.3933 0.4417 0.7651 30 1 1.7923 -0.5138 -0.8900 31 1 1.5613 2.4679 -1.2085 32 1 1.5878 2.4586 1.2243 33 1 2.4998 1.0970 2.2181 34 1 2.9186 -4.5711 4.0335 35 1 1.6973 -4.8113 6.7361 36 1 2.9376 -5.4706 7.8886 37 1 3.7639 -7.1179 8.4531 38 1 3.5768 -9.1923 9.7660 39 1 1.4710 -8.8867 5.3221 40 1 4.9248 -6.5833 6.4360 41 1 4.5153 -6.3902 4.6771 42 1 2.2752 -3.8286 2.4822 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10156534_12360598.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:49:01 Heat of formation + Delta-G solvation = -112.445857 kcal Electronic energy + Delta-G solvation = -33312.794988 eV Core-core repulsion = 28030.197877 eV Total energy + Delta-G solvation = -5282.597111 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 398.068 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -50.09683 -50.08192 -50.04883 -41.79568 -40.85425 -39.93317 -38.84032 -37.76292 -37.54374 -34.86594 -33.19996 -32.13783 -31.37120 -31.29074 -27.97708 -26.67584 -26.12054 -24.40248 -24.36515 -23.92929 -22.75647 -22.02222 -20.34899 -19.72459 -18.98812 -18.80663 -18.53738 -17.99249 -17.72133 -17.38821 -17.29967 -16.85937 -16.80867 -16.72942 -16.57027 -16.22714 -16.04073 -15.92214 -15.76015 -15.62703 -15.41601 -15.09248 -14.86680 -14.59966 -14.44803 -14.29888 -14.13574 -13.83937 -13.72754 -13.59080 -13.40815 -13.17600 -12.97985 -12.59093 -12.50367 -12.40353 -12.35394 -11.93003 -11.82906 -11.63917 -11.28207 -11.24018 -10.78160 -10.59500 -10.17553 -10.04553 -9.81239 -9.58510 -4.95960 -0.80537 -0.29803 -0.13819 0.02544 0.93661 1.16106 1.39047 1.54119 1.83608 1.91781 2.24334 2.32641 2.79758 2.85812 3.03603 3.11483 3.25135 3.42046 3.46705 3.50438 3.53605 3.69172 3.70473 3.79476 3.93969 4.05013 4.10587 4.16431 4.19295 4.33091 4.38949 4.53277 4.54396 4.64852 4.70291 4.73853 4.80116 4.82547 4.85894 4.87105 4.94426 5.04948 5.10082 5.14891 5.34730 5.39610 5.58681 5.65305 6.32490 6.38903 7.01017 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.087 4.087 3 Si 0.771 3.229 4 C -0.091 4.091 5 C -0.131 4.131 6 C 0.140 3.860 7 F -0.124 7.124 8 C -0.147 4.147 9 C 0.561 3.439 10 O -0.559 6.559 11 N -0.690 5.690 12 C 0.113 3.887 13 H 0.093 0.907 14 C -0.143 4.143 15 C -0.066 4.066 16 H 0.119 0.881 17 C -0.063 4.063 18 C -0.079 4.079 19 C -0.139 4.139 20 C 0.077 3.923 21 F -0.143 7.143 22 C -0.087 4.087 23 Cl -0.064 7.064 24 C -0.081 4.081 25 C -0.124 4.124 26 C -0.076 4.076 27 C 0.104 3.896 28 F -0.128 7.128 29 H 0.390 0.610 30 H 0.133 0.867 31 H -0.295 1.295 32 H -0.271 1.271 33 H 0.170 0.830 34 H 0.416 0.584 35 H 0.070 0.930 36 H 0.104 0.896 37 H 0.165 0.835 38 H 0.160 0.840 39 H 0.158 0.842 40 H 0.108 0.892 41 H 0.092 0.908 42 H 0.183 0.817 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.588 1.282 -2.940 4.121 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.195 4.195 3 Si 0.675 3.325 4 C -0.092 4.092 5 C -0.150 4.150 6 C 0.119 3.881 7 F -0.103 7.103 8 C -0.151 4.151 9 C 0.348 3.652 10 O -0.438 6.438 11 N -0.342 5.342 12 C 0.008 3.992 13 H 0.111 0.889 14 C -0.181 4.181 15 C -0.084 4.084 16 H 0.137 0.863 17 C -0.063 4.063 18 C -0.097 4.097 19 C -0.158 4.158 20 C 0.057 3.943 21 F -0.122 7.122 22 C -0.115 4.115 23 Cl -0.035 7.035 24 C -0.099 4.099 25 C -0.161 4.161 26 C -0.095 4.095 27 C 0.084 3.916 28 F -0.106 7.106 29 H 0.240 0.760 30 H 0.150 0.850 31 H -0.223 1.223 32 H -0.197 1.197 33 H 0.187 0.813 34 H 0.255 0.745 35 H 0.089 0.911 36 H 0.123 0.877 37 H 0.182 0.818 38 H 0.177 0.823 39 H 0.176 0.824 40 H 0.127 0.873 41 H 0.111 0.889 42 H 0.200 0.800 Dipole moment (debyes) X Y Z Total from point charges 2.710 2.044 -2.847 4.431 hybrid contribution -1.580 -0.992 0.449 1.919 sum 1.130 1.052 -2.398 2.853 Atomic orbital electron populations 1.86658 1.17506 1.80394 1.50274 1.25289 0.84157 1.12558 0.97497 0.93853 0.90104 0.71216 0.77331 1.20435 0.98847 0.92665 0.97303 1.21099 1.00342 1.02359 0.91152 1.17803 0.96250 0.88510 0.85519 1.91606 1.84101 1.77609 1.56942 1.19818 1.06361 0.92295 0.96640 1.18015 0.78265 0.83034 0.85846 1.90878 1.46410 1.66801 1.39697 1.45431 1.63044 1.05162 1.20594 1.21982 0.97193 0.93566 0.86501 0.88927 1.23637 0.99443 0.95172 0.99848 1.21671 0.98754 0.89477 0.98543 0.86335 1.19884 0.96385 0.95137 0.94941 1.21315 0.97734 0.97384 0.93261 1.21415 0.99902 0.91836 1.02623 1.17841 1.01997 0.84320 0.90138 1.91513 1.94601 1.48869 1.77228 1.21236 1.02637 0.92507 0.95078 1.98402 1.74660 1.44395 1.86014 1.21117 0.98444 0.89815 1.00527 1.23427 0.95812 0.92260 1.04646 1.21351 0.95850 1.02404 0.89868 1.17356 0.99186 0.89001 0.86063 1.91576 1.84435 1.78163 1.56431 0.76033 0.84955 1.22251 1.19706 0.81300 0.74505 0.91118 0.87729 0.81767 0.82278 0.82395 0.87328 0.88911 0.80022 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.50 12.88 -148.98 -1.92 -1.42 16 2 C -0.09 0.38 2.44 71.24 0.17 0.55 16 3 Si 0.77 -4.36 30.23 68.60 2.07 -2.28 16 4 C -0.09 0.39 5.27 -19.78 -0.10 0.28 16 5 C -0.13 0.49 8.62 22.28 0.19 0.68 16 6 C 0.14 0.12 7.28 22.67 0.17 0.29 16 7 F -0.12 -0.87 15.55 44.97 0.70 -0.17 16 8 C -0.15 0.24 5.88 -20.06 -0.12 0.12 16 9 C 0.56 0.68 7.77 86.74 0.67 1.35 16 10 O -0.56 -5.90 14.94 -3.94 -0.06 -5.96 16 11 N -0.69 4.53 5.21 -442.77 -2.31 2.22 16 12 C 0.11 -0.76 4.33 45.58 0.20 -0.56 16 13 H 0.09 -0.21 7.46 -2.39 -0.02 -0.22 16 14 C -0.14 1.15 7.27 31.18 0.23 1.38 16 15 C -0.07 0.70 3.85 -11.01 -0.04 0.66 16 16 H 0.12 -1.59 8.08 -2.39 -0.02 -1.61 16 17 C -0.06 0.42 5.29 -19.86 -0.11 0.31 16 18 C -0.08 0.52 8.54 22.27 0.19 0.71 16 19 C -0.14 0.36 10.03 22.31 0.22 0.59 16 20 C 0.08 0.22 7.28 22.40 0.16 0.39 16 21 F -0.14 -1.03 16.84 44.97 0.76 -0.27 16 22 C -0.09 -0.16 6.33 22.37 0.14 -0.02 16 23 Cl -0.06 -0.26 28.62 -2.72 -0.08 -0.34 16 24 C -0.08 0.29 9.49 22.28 0.21 0.50 16 25 C -0.12 1.37 7.29 31.12 0.23 1.60 16 26 C -0.08 0.51 9.51 22.57 0.21 0.73 16 27 C 0.10 -0.40 7.23 22.33 0.16 -0.24 16 28 F -0.13 0.12 16.73 44.97 0.75 0.87 16 29 H 0.39 -2.81 8.70 -74.06 -0.64 -3.46 16 30 H 0.13 -0.71 7.89 -2.39 -0.02 -0.73 16 31 H -0.30 -0.66 7.11 99.48 0.71 0.04 16 32 H -0.27 0.78 6.68 99.48 0.66 1.45 16 33 H 0.17 -1.10 4.83 -2.91 -0.01 -1.11 16 34 H 0.42 -5.45 6.73 -92.71 -0.62 -6.07 16 35 H 0.07 -0.41 8.14 -2.39 -0.02 -0.43 16 36 H 0.10 -0.96 6.38 -2.38 -0.02 -0.97 16 37 H 0.16 -1.88 6.72 -2.91 -0.02 -1.90 16 38 H 0.16 -0.94 8.06 -2.91 -0.02 -0.96 16 39 H 0.16 -1.15 8.05 -2.91 -0.02 -1.18 16 40 H 0.11 -1.27 7.66 -2.39 -0.02 -1.29 16 41 H 0.09 -1.17 8.14 -2.38 -0.02 -1.19 16 42 H 0.18 -2.53 6.41 -2.91 -0.02 -2.55 16 Total: 0.00 -22.81 381.73 2.59 -20.23 By element: Atomic # 1 Polarization: -22.06 SS G_CDS: -0.12 Total: -22.19 kcal Atomic # 6 Polarization: 6.52 SS G_CDS: 2.79 Total: 9.31 kcal Atomic # 7 Polarization: 4.53 SS G_CDS: -2.31 Total: 2.22 kcal Atomic # 8 Polarization: -5.40 SS G_CDS: -1.98 Total: -7.38 kcal Atomic # 9 Polarization: -1.78 SS G_CDS: 2.21 Total: 0.43 kcal Atomic # 14 Polarization: -4.36 SS G_CDS: 2.07 Total: -2.28 kcal Atomic # 17 Polarization: -0.26 SS G_CDS: -0.08 Total: -0.34 kcal Total: -22.81 2.59 -20.23 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10156534_12360598.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -92.220 kcal (2) G-P(sol) polarization free energy of solvation -22.814 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -115.034 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.588 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.226 kcal (6) G-S(sol) free energy of system = (1) + (5) -112.446 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds