Wall clock time and date at job start Sat Mar 6 2021 11:49:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50692 * 1 3 3 C 1.38973 * 119.95675 * 2 1 4 4 O 1.35709 * 119.91582 * 359.97438 * 3 2 1 5 5 C 1.39020 * 120.17645 * 180.25266 * 3 2 1 6 6 C 1.50706 * 119.95708 * 179.72463 * 5 3 2 7 7 O 1.42895 * 109.47147 * 284.73376 * 6 5 3 8 8 Si 1.86295 * 109.47097 * 164.72877 * 6 5 3 9 9 C 1.37675 * 120.08960 * 359.45709 * 5 3 2 10 10 C 1.39756 * 119.90972 * 0.27159 * 9 5 3 11 11 C 1.47604 * 120.08612 * 179.97438 * 10 9 5 12 12 O 1.21577 * 120.00372 * 0.02562 * 11 10 9 13 13 N 1.34777 * 120.00023 * 179.97438 * 11 10 9 14 14 C 1.46503 * 120.00412 * 180.02562 * 13 11 10 15 15 H 1.08999 * 112.84607 * 336.19268 * 14 13 11 16 16 C 1.53774 * 113.61452 * 107.50569 * 14 13 11 17 17 C 1.53770 * 87.08359 * 89.11960 * 16 14 13 18 18 H 1.09003 * 113.69035 * 270.87260 * 17 16 14 19 19 C 1.50706 * 113.61899 * 139.98130 * 17 16 14 20 20 C 1.38211 * 119.97013 * 142.49810 * 19 17 16 21 21 C 1.38316 * 120.01088 * 180.02562 * 20 19 17 22 22 Cl 1.73604 * 120.02735 * 179.97438 * 21 20 19 23 23 C 1.38552 * 119.95130 * 359.97438 * 21 20 19 24 24 F 1.35102 * 120.02954 * 179.97438 * 23 21 20 25 25 C 1.38443 * 119.93939 * 359.97438 * 23 21 20 26 26 C 1.38196 * 119.98462 * 359.75141 * 25 23 21 27 27 C 1.53776 * 87.08529 * 25.42878 * 17 16 14 28 28 C 1.37731 * 119.95771 * 179.71000 * 2 1 3 29 29 H 1.09003 * 109.46951 * 270.28717 * 1 2 3 30 30 H 1.08994 * 109.47609 * 30.28969 * 1 2 3 31 31 H 1.09001 * 109.47277 * 150.29153 * 1 2 3 32 32 H 0.96703 * 114.00153 * 270.27545 * 4 3 2 33 33 H 1.09001 * 109.46953 * 44.72891 * 6 5 3 34 34 H 0.96705 * 114.00010 * 299.99569 * 7 6 5 35 35 H 1.48498 * 110.00087 * 58.68441 * 8 6 5 36 36 H 1.48505 * 109.99765 * 180.02562 * 8 6 5 37 37 H 1.08006 * 120.04749 * 180.29329 * 9 5 3 38 38 H 0.97006 * 119.99594 * 0.02562 * 13 11 10 39 39 H 1.09005 * 113.61595 * 203.66743 * 16 14 13 40 40 H 1.09003 * 113.61690 * 334.56344 * 16 14 13 41 41 H 1.08003 * 119.99463 * 0.02562 * 20 19 17 42 42 H 1.07992 * 120.00746 * 180.02562 * 25 23 21 43 43 H 1.08003 * 119.97696 * 180.24566 * 26 25 23 44 44 H 1.08993 * 113.61861 * 220.02168 * 27 17 16 45 45 H 1.09010 * 113.68749 * 89.12623 * 27 17 16 46 46 H 1.07995 * 120.04134 * 0.03832 * 28 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2009 1.2041 0.0000 4 8 1.5197 2.3778 -0.0005 5 6 3.5911 1.2094 -0.0053 6 6 4.3386 2.5180 -0.0115 7 8 4.2724 3.0981 -1.3157 8 14 6.1196 2.2179 0.4451 9 6 4.2859 0.0209 0.0007 10 6 3.5918 -1.1921 0.0064 11 6 4.3328 -2.4687 0.0123 12 8 5.5486 -2.4659 0.0127 13 7 3.6617 -3.6374 0.0183 14 6 4.3971 -4.9045 0.0247 15 1 5.4043 -4.8113 -0.3813 16 6 4.3398 -5.6431 1.3723 17 6 3.0628 -6.3257 0.8546 18 1 2.1500 -5.7726 1.0762 19 6 2.9668 -7.7843 1.2211 20 6 1.7433 -8.3330 1.5559 21 6 1.6543 -9.6715 1.8930 22 17 0.1178 -10.3610 2.3143 23 6 2.7924 -10.4617 1.8941 24 9 2.7074 -11.7692 2.2235 25 6 4.0168 -9.9103 1.5573 26 6 4.1018 -8.5739 1.2155 27 6 3.6018 -6.0813 -0.5647 28 6 2.1947 -1.1933 0.0060 29 1 -0.3633 0.0052 1.0277 30 1 -0.3634 0.8873 -0.5183 31 1 -0.3634 -0.8926 -0.5093 32 1 1.3189 2.7157 -0.8841 33 1 3.8876 3.1975 0.7116 34 1 4.6563 2.5469 -2.0114 35 1 6.7370 1.2681 -0.5150 36 1 6.8675 3.5009 0.4431 37 1 5.3659 0.0258 0.0014 38 1 2.6916 -3.6396 0.0184 39 1 5.1703 -6.3317 1.5284 40 1 4.1686 -4.9849 2.2241 41 1 0.8565 -7.7165 1.5544 42 1 4.9045 -10.5253 1.5574 43 1 5.0564 -8.1448 0.9490 44 1 2.8347 -5.7769 -1.2767 45 1 4.2306 -6.8890 -0.9396 46 1 1.6547 -2.1285 0.0101 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10156534_13287732.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:49:57 Heat of formation + Delta-G solvation = -79.541126 kcal Electronic energy + Delta-G solvation = -32717.503308 eV Core-core repulsion = 27901.021194 eV Total energy + Delta-G solvation = -4816.482115 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.102 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -49.96950 -42.00842 -41.39566 -40.28953 -38.97417 -37.98317 -37.58992 -37.47716 -34.78622 -34.06286 -32.35094 -32.03254 -31.13342 -28.16243 -27.04097 -26.95191 -26.42009 -24.86869 -24.32553 -22.90909 -22.16123 -21.67855 -20.44979 -19.65238 -19.10610 -18.79100 -18.18428 -17.79071 -17.50426 -17.20818 -16.85677 -16.79308 -16.50809 -16.15401 -16.07921 -15.94138 -15.82786 -15.60941 -15.12649 -14.92238 -14.75459 -14.54886 -14.43157 -14.39096 -14.15978 -13.95488 -13.88692 -13.69571 -13.62309 -13.36268 -13.12717 -12.90996 -12.68986 -12.58354 -12.46016 -12.41416 -11.93290 -11.81863 -11.76848 -11.70447 -11.47900 -11.05502 -10.62773 -10.26562 -10.14477 -10.07038 -9.73767 -9.65245 -4.95914 -0.45385 -0.21362 -0.09357 -0.00570 0.93260 1.23574 1.57799 1.59798 1.89030 1.94093 2.20262 2.50160 2.97471 3.01747 3.19863 3.27568 3.33536 3.40710 3.42962 3.49342 3.52640 3.60105 3.70211 3.83157 3.87523 3.88482 4.01929 4.11329 4.20782 4.37961 4.41013 4.43996 4.47965 4.50380 4.55634 4.58820 4.66196 4.68406 4.72276 4.73381 4.81781 4.89933 4.92568 4.93493 5.01224 5.02315 5.20146 5.21590 5.40106 5.47348 5.52047 6.30076 6.30803 6.51056 7.06337 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.111 4.111 2 C -0.118 4.118 3 C 0.162 3.838 4 O -0.487 6.487 5 C -0.147 4.147 6 C -0.067 4.067 7 O -0.528 6.528 8 Si 0.684 3.316 9 C -0.053 4.053 10 C -0.139 4.139 11 C 0.565 3.435 12 O -0.529 6.529 13 N -0.710 5.710 14 C 0.120 3.880 15 H 0.109 0.891 16 C -0.144 4.144 17 C -0.074 4.074 18 H 0.102 0.898 19 C -0.069 4.069 20 C -0.079 4.079 21 C -0.072 4.072 22 Cl -0.047 7.047 23 C 0.106 3.894 24 F -0.126 7.126 25 C -0.137 4.137 26 C -0.083 4.083 27 C -0.136 4.136 28 C -0.065 4.065 29 H 0.077 0.923 30 H 0.071 0.929 31 H 0.069 0.931 32 H 0.398 0.602 33 H 0.124 0.876 34 H 0.375 0.625 35 H -0.255 1.255 36 H -0.253 1.253 37 H 0.146 0.854 38 H 0.401 0.599 39 H 0.098 0.902 40 H 0.079 0.921 41 H 0.143 0.857 42 H 0.147 0.853 43 H 0.141 0.859 44 H 0.079 0.921 45 H 0.101 0.899 46 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.248 0.308 -1.163 2.549 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C -0.118 4.118 3 C 0.117 3.883 4 O -0.299 6.299 5 C -0.148 4.148 6 C -0.177 4.177 7 O -0.334 6.334 8 Si 0.585 3.415 9 C -0.071 4.071 10 C -0.142 4.142 11 C 0.353 3.647 12 O -0.406 6.406 13 N -0.362 5.362 14 C 0.014 3.986 15 H 0.127 0.873 16 C -0.182 4.182 17 C -0.092 4.092 18 H 0.120 0.880 19 C -0.070 4.070 20 C -0.098 4.098 21 C -0.100 4.100 22 Cl -0.018 7.018 23 C 0.086 3.914 24 F -0.104 7.104 25 C -0.156 4.156 26 C -0.101 4.101 27 C -0.174 4.174 28 C -0.084 4.084 29 H 0.095 0.905 30 H 0.090 0.910 31 H 0.088 0.912 32 H 0.257 0.743 33 H 0.142 0.858 34 H 0.223 0.777 35 H -0.179 1.179 36 H -0.177 1.177 37 H 0.163 0.837 38 H 0.237 0.763 39 H 0.116 0.884 40 H 0.098 0.902 41 H 0.160 0.840 42 H 0.165 0.835 43 H 0.159 0.841 44 H 0.098 0.902 45 H 0.120 0.880 46 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -0.930 0.686 -0.438 1.236 hybrid contribution -1.110 -0.504 -1.449 1.894 sum -2.041 0.182 -1.887 2.786 Atomic orbital electron populations 1.20698 0.89662 1.03165 1.03179 1.20217 0.97317 0.92100 1.02191 1.18321 0.88793 0.85295 0.95933 1.84699 1.75613 1.35674 1.33901 1.20578 0.93831 0.95857 1.04573 1.24907 1.10550 0.93911 0.88314 1.86615 1.82785 1.47721 1.16325 0.94685 0.74283 0.81256 0.91274 1.21161 1.00895 0.90222 0.94872 1.19771 0.93423 0.93309 1.07734 1.18135 0.87228 0.83498 0.75870 1.90818 1.13295 1.87420 1.49028 1.45567 1.10091 1.04929 1.75585 1.21863 0.97440 0.82248 0.97015 0.87264 1.23593 0.97290 0.99263 0.98076 1.21628 0.99481 0.91066 0.97010 0.87982 1.19692 0.92319 0.95791 0.99185 1.20884 0.98732 0.92116 0.98036 1.21047 0.87247 0.94633 1.07040 1.98415 1.27147 1.84576 1.91644 1.17480 0.93390 0.78860 1.01711 1.91568 1.96897 1.32174 1.89783 1.21184 0.96280 0.96541 1.01613 1.21012 0.99096 0.92368 0.97667 1.23458 1.00191 0.97926 0.95808 1.21086 0.92563 0.97795 0.96948 0.90459 0.90987 0.91216 0.74348 0.85805 0.77747 1.17935 1.17728 0.83712 0.76349 0.88377 0.90247 0.83958 0.83541 0.84084 0.90191 0.88044 0.85070 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.32 9.78 36.00 0.35 0.67 16 2 C -0.12 0.16 5.89 -104.54 -0.62 -0.46 16 3 C 0.16 -0.04 6.66 -39.02 -0.26 -0.30 16 4 O -0.49 0.26 11.84 -18.83 -0.22 0.04 16 5 C -0.15 0.00 5.27 -104.53 -0.55 -0.55 16 6 C -0.07 0.01 2.38 36.01 0.09 0.09 16 7 O -0.53 -0.22 12.88 -35.23 -0.45 -0.67 16 8 Si 0.68 -0.11 30.24 -169.99 -5.14 -5.25 16 9 C -0.05 -0.03 8.20 -39.22 -0.32 -0.35 16 10 C -0.14 0.01 5.87 -104.96 -0.62 -0.60 16 11 C 0.56 0.49 7.76 -12.44 -0.10 0.39 16 12 O -0.53 -2.43 15.94 5.30 0.08 -2.35 16 13 N -0.71 1.65 5.21 -54.04 -0.28 1.37 16 14 C 0.12 -0.31 4.32 -67.12 -0.29 -0.60 16 15 H 0.11 -0.10 7.46 -51.93 -0.39 -0.48 16 16 C -0.14 0.46 7.25 -25.93 -0.19 0.28 16 17 C -0.07 0.30 3.86 -90.97 -0.35 -0.05 16 18 H 0.10 -0.51 8.09 -51.93 -0.42 -0.93 16 19 C -0.07 0.17 5.29 -104.62 -0.55 -0.38 16 20 C -0.08 0.11 9.49 -39.56 -0.38 -0.27 16 21 C -0.07 -0.05 6.33 -39.44 -0.25 -0.30 16 22 Cl -0.05 -0.07 28.62 -51.86 -1.48 -1.56 16 23 C 0.11 0.12 7.28 -39.39 -0.29 -0.17 16 24 F -0.13 -0.35 16.84 2.25 0.04 -0.31 16 25 C -0.14 0.15 10.03 -39.52 -0.40 -0.25 16 26 C -0.08 0.21 8.59 -39.59 -0.34 -0.13 16 27 C -0.14 0.57 7.29 -25.92 -0.19 0.38 16 28 C -0.07 0.13 9.18 -39.22 -0.36 -0.23 16 29 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 30 H 0.07 -0.21 7.53 -51.93 -0.39 -0.60 16 31 H 0.07 -0.29 8.08 -51.93 -0.42 -0.71 16 32 H 0.40 -1.51 9.06 45.56 0.41 -1.10 16 33 H 0.12 -0.01 7.81 -51.93 -0.41 -0.42 16 34 H 0.38 -0.86 8.70 45.56 0.40 -0.47 16 35 H -0.25 -0.50 6.68 56.52 0.38 -0.12 16 36 H -0.25 -0.69 7.11 56.52 0.40 -0.29 16 37 H 0.15 0.15 4.43 -52.48 -0.23 -0.08 16 38 H 0.40 -1.95 6.72 -40.82 -0.27 -2.23 16 39 H 0.10 -0.37 6.32 -51.93 -0.33 -0.70 16 40 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 41 H 0.14 -0.42 8.05 -52.48 -0.42 -0.84 16 42 H 0.15 -0.40 8.06 -52.49 -0.42 -0.82 16 43 H 0.14 -0.64 6.67 -52.48 -0.35 -0.99 16 44 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 45 H 0.10 -0.45 7.72 -51.92 -0.40 -0.85 16 46 H 0.13 -0.66 6.39 -52.49 -0.34 -0.99 16 LS Contribution 401.61 15.07 6.05 6.05 Total: 0.00 -8.65 401.61 -11.48 -20.14 By element: Atomic # 1 Polarization: -10.17 SS G_CDS: -4.47 Total: -14.64 kcal Atomic # 6 Polarization: 2.78 SS G_CDS: -5.60 Total: -2.82 kcal Atomic # 7 Polarization: 1.65 SS G_CDS: -0.28 Total: 1.37 kcal Atomic # 8 Polarization: -2.39 SS G_CDS: -0.59 Total: -2.98 kcal Atomic # 9 Polarization: -0.35 SS G_CDS: 0.04 Total: -0.31 kcal Atomic # 14 Polarization: -0.11 SS G_CDS: -5.14 Total: -5.25 kcal Atomic # 17 Polarization: -0.07 SS G_CDS: -1.48 Total: -1.56 kcal Total LS contribution 6.05 Total: 6.05 kcal Total: -8.65 -11.48 -20.14 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10156534_13287732.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.404 kcal (2) G-P(sol) polarization free energy of solvation -8.654 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.058 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.483 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.137 kcal (6) G-S(sol) free energy of system = (1) + (5) -79.541 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds