Wall clock time and date at job start Sat Mar 6 2021 11:50:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.36411 * 125.80010 * 2 1 4 4 C 1.47378 * 127.19432 * 359.95745 * 3 2 1 5 5 O 1.21608 * 120.00013 * 0.02562 * 4 3 2 6 6 N 1.34778 * 120.00318 * 179.97438 * 4 3 2 7 7 C 1.46501 * 120.00427 * 180.02562 * 6 4 3 8 8 H 1.09005 * 112.84614 * 23.80156 * 7 6 4 9 9 C 1.53773 * 113.61601 * 154.99892 * 7 6 4 10 10 C 1.53779 * 87.08133 * 89.11785 * 9 7 6 11 11 H 1.09000 * 113.61644 * 270.80164 * 10 9 7 12 12 C 1.50695 * 113.61992 * 139.97801 * 10 9 7 13 13 C 1.38218 * 119.96992 * 299.73097 * 12 10 9 14 14 C 1.38325 * 120.01074 * 179.76301 * 13 12 10 15 15 Cl 1.73602 * 120.02280 * 180.25025 * 14 13 12 16 16 C 1.38552 * 119.95098 * 0.50537 * 14 13 12 17 17 F 1.35099 * 120.02514 * 179.76677 * 16 14 13 18 18 C 1.38443 * 119.93982 * 359.74579 * 16 14 13 19 19 C 1.38203 * 119.98567 * 359.97438 * 18 16 14 20 20 C 1.53777 * 113.61365 * 252.50224 * 7 6 4 21 21 C 1.47024 * 105.61628 * 179.97438 * 3 2 1 22 22 C 1.34180 * 105.95151 * 0.02562 * 21 3 2 23 23 C 1.50703 * 125.43370 * 180.02562 * 22 21 3 24 24 O 1.42894 * 109.47254 * 299.99651 * 23 22 21 25 25 Si 1.86301 * 109.46658 * 179.97438 * 23 22 21 26 26 O 1.33646 * 125.80106 * 179.69032 * 2 1 3 27 27 H 1.09002 * 109.47152 * 89.99913 * 1 2 3 28 28 H 1.09001 * 109.46980 * 330.00014 * 1 2 3 29 29 H 1.09004 * 109.47113 * 209.99994 * 1 2 3 30 30 H 0.97003 * 119.99838 * 359.97438 * 6 4 3 31 31 H 1.09004 * 113.61353 * 203.66423 * 9 7 6 32 32 H 1.08999 * 113.61814 * 334.48597 * 9 7 6 33 33 H 1.07994 * 119.99246 * 359.97438 * 13 12 10 34 34 H 1.07996 * 120.00757 * 179.97438 * 18 16 14 35 35 H 1.07998 * 119.97066 * 179.97438 * 19 18 16 36 36 H 1.09000 * 113.62004 * 25.42600 * 20 7 6 37 37 H 1.09001 * 113.61823 * 156.33493 * 20 7 6 38 38 H 1.08002 * 127.02042 * 179.97438 * 21 3 2 39 39 H 1.08998 * 109.47144 * 60.00145 * 23 22 21 40 40 H 0.96700 * 114.00504 * 300.00067 * 24 23 22 41 41 H 1.48502 * 109.99827 * 180.02562 * 25 23 22 42 42 H 1.48496 * 110.00494 * 301.32224 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1064 0.0000 4 6 1.8740 2.5157 -0.0009 5 8 0.6890 2.7892 -0.0012 6 7 2.7930 3.5016 -0.0002 7 6 2.3645 4.9025 -0.0005 8 1 1.3616 5.0385 0.4042 9 6 3.4051 5.8651 0.5957 10 6 3.9882 5.9876 -0.8220 11 1 4.7520 5.2429 -1.0459 12 6 4.4136 7.3881 -1.1809 13 6 3.4853 8.4121 -1.1841 14 6 3.8758 9.6988 -1.5086 15 17 2.7114 10.9865 -1.5065 16 6 5.1957 9.9582 -1.8406 17 9 5.5777 11.2135 -2.1624 18 6 6.1227 8.9300 -1.8417 19 6 5.7310 7.6464 -1.5115 20 6 2.5905 5.6155 -1.3442 21 6 3.6849 0.5991 0.0006 22 6 3.5859 -0.7390 0.0004 23 6 4.7460 -1.7010 0.0014 24 8 5.5437 -1.4864 -1.1646 25 14 4.1027 -3.4494 0.0013 26 8 2.2888 -1.0839 0.0059 27 1 -0.3633 0.0000 -1.0277 28 1 -0.3633 0.8900 0.5138 29 1 -0.3633 -0.8900 0.5139 30 1 3.7382 3.2835 0.0012 31 1 2.9756 6.7932 0.9729 32 1 4.0808 5.3912 1.3077 33 1 2.4557 8.2083 -0.9299 34 1 7.1518 9.1308 -2.1007 35 1 6.4543 6.8444 -1.5128 36 1 2.6095 4.9398 -2.1993 37 1 1.9384 6.4754 -1.4973 38 1 4.5928 1.1841 0.0004 39 1 5.3528 -1.5375 0.8919 40 1 5.0673 -1.6148 -1.9963 41 1 5.2370 -4.4079 0.0029 42 1 3.2457 -3.6755 1.1928 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10156534_13308374.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:50:07 Heat of formation + Delta-G solvation = -44.631423 kcal Electronic energy + Delta-G solvation = -29249.289368 eV Core-core repulsion = 24718.084811 eV Total energy + Delta-G solvation = -4531.204557 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.087 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -50.05084 -43.75661 -41.57559 -40.27319 -38.80606 -37.97895 -37.57457 -34.75847 -33.93650 -33.04549 -32.01397 -31.46517 -29.36817 -26.70673 -26.61148 -25.61283 -24.48401 -24.03484 -22.86332 -22.19523 -20.85405 -20.09567 -19.03678 -18.86243 -18.03218 -17.71673 -17.67060 -17.25740 -16.86599 -16.86116 -16.64922 -16.06368 -15.91467 -15.79620 -15.53940 -15.23862 -14.85036 -14.69317 -14.44597 -14.26436 -14.26163 -14.12846 -13.98072 -13.88540 -13.79856 -13.52456 -13.44817 -12.85951 -12.75270 -12.61801 -12.52709 -12.25019 -12.17782 -11.93664 -11.63516 -11.26765 -11.13809 -10.92140 -10.60195 -10.13028 -10.03163 -9.60002 -9.55098 -4.99746 -0.13219 0.01013 0.23917 0.84723 0.92906 1.19355 1.41203 1.77190 1.92373 2.11855 2.24122 2.32721 3.02812 3.23536 3.40694 3.48912 3.57625 3.63497 3.67556 3.75470 3.80059 3.92660 4.03498 4.09597 4.12549 4.24950 4.33551 4.45485 4.48093 4.61023 4.63045 4.67323 4.75613 4.77999 4.84016 4.86410 4.88741 4.95983 5.04238 5.05114 5.13788 5.19447 5.23699 5.39604 5.60132 5.66429 5.91434 6.49564 6.64395 7.17520 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.084 3.916 3 C -0.268 4.268 4 C 0.591 3.409 5 O -0.573 6.573 6 N -0.693 5.693 7 C 0.115 3.885 8 H 0.088 0.912 9 C -0.127 4.127 10 C -0.061 4.061 11 H 0.125 0.875 12 C -0.065 4.065 13 C -0.084 4.084 14 C -0.087 4.087 15 Cl -0.064 7.064 16 C 0.078 3.922 17 F -0.143 7.143 18 C -0.139 4.139 19 C -0.074 4.074 20 C -0.144 4.144 21 C -0.145 4.145 22 C -0.062 4.062 23 C -0.020 4.020 24 O -0.538 6.538 25 Si 0.771 3.229 26 O -0.173 6.173 27 H 0.102 0.898 28 H 0.095 0.905 29 H 0.095 0.905 30 H 0.414 0.586 31 H 0.100 0.900 32 H 0.091 0.909 33 H 0.153 0.847 34 H 0.162 0.838 35 H 0.170 0.830 36 H 0.072 0.928 37 H 0.096 0.904 38 H 0.180 0.820 39 H 0.140 0.860 40 H 0.400 0.600 41 H -0.280 1.280 42 H -0.297 1.297 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.289 -5.075 -1.063 6.140 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C 0.031 3.969 3 C -0.272 4.272 4 C 0.381 3.619 5 O -0.455 6.455 6 N -0.344 5.344 7 C 0.010 3.990 8 H 0.106 0.894 9 C -0.165 4.165 10 C -0.079 4.079 11 H 0.143 0.857 12 C -0.065 4.065 13 C -0.102 4.102 14 C -0.114 4.114 15 Cl -0.035 7.035 16 C 0.058 3.942 17 F -0.122 7.122 18 C -0.158 4.158 19 C -0.092 4.092 20 C -0.183 4.183 21 C -0.164 4.164 22 C -0.109 4.109 23 C -0.131 4.131 24 O -0.346 6.346 25 Si 0.677 3.323 26 O -0.070 6.070 27 H 0.120 0.880 28 H 0.114 0.886 29 H 0.114 0.886 30 H 0.251 0.749 31 H 0.119 0.881 32 H 0.109 0.891 33 H 0.170 0.830 34 H 0.179 0.821 35 H 0.188 0.812 36 H 0.090 0.910 37 H 0.114 0.886 38 H 0.197 0.803 39 H 0.157 0.843 40 H 0.251 0.749 41 H -0.207 1.207 42 H -0.224 1.224 Dipole moment (debyes) X Y Z Total from point charges 2.720 -5.638 -0.220 6.264 hybrid contribution 0.393 1.356 0.264 1.436 sum 3.113 -4.282 0.044 5.294 Atomic orbital electron populations 1.20706 0.82737 1.05344 1.05353 1.23215 0.94741 0.83078 0.95876 1.21192 0.94258 0.93391 1.18403 1.17348 0.85201 0.84388 0.74990 1.90764 1.18048 1.84491 1.52173 1.45324 1.09967 1.04748 1.74359 1.21859 0.99538 0.79917 0.97718 0.89422 1.23406 0.97391 0.99575 0.96094 1.21642 0.97482 0.92269 0.96528 0.85698 1.19888 0.92995 0.95306 0.98337 1.21009 1.01785 0.88967 0.98467 1.21191 0.89544 0.91895 1.08785 1.98401 1.58081 1.49859 1.97156 1.17837 0.92417 0.80679 1.03290 1.91513 1.91620 1.38672 1.90349 1.21453 1.00379 0.91990 1.01981 1.21417 0.96146 0.96323 0.95336 1.23580 0.96466 1.00769 0.97440 1.22794 0.96363 0.93550 1.03683 1.22918 0.82807 0.96118 1.09100 1.24376 0.89350 1.06675 0.92702 1.86531 1.38669 1.93297 1.16120 0.93313 0.78943 0.72778 0.87305 1.83675 1.16848 1.35038 1.71470 0.87993 0.88615 0.88600 0.74858 0.88111 0.89059 0.82968 0.82076 0.81221 0.90959 0.88559 0.80264 0.84329 0.74921 1.20689 1.22395 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.06 9.89 71.24 0.70 0.76 16 2 C 0.08 0.18 7.37 25.26 0.19 0.36 16 3 C -0.27 -0.51 6.31 -18.99 -0.12 -0.63 16 4 C 0.59 2.22 7.81 86.65 0.68 2.90 16 5 O -0.57 -6.05 14.44 -4.06 -0.06 -6.11 16 6 N -0.69 2.15 5.26 -443.36 -2.33 -0.18 16 7 C 0.12 -0.41 4.32 45.51 0.20 -0.21 16 8 H 0.09 0.10 7.46 -2.38 -0.02 0.08 16 9 C -0.13 1.00 7.29 31.12 0.23 1.23 16 10 C -0.06 0.53 3.86 -11.01 -0.04 0.49 16 11 H 0.13 -1.54 8.09 -2.39 -0.02 -1.56 16 12 C -0.06 0.34 5.29 -19.86 -0.11 0.24 16 13 C -0.08 0.15 8.40 22.29 0.19 0.34 16 14 C -0.09 -0.26 6.33 22.37 0.14 -0.12 16 15 Cl -0.06 -0.34 28.62 -2.72 -0.08 -0.42 16 16 C 0.08 0.27 7.28 22.39 0.16 0.43 16 17 F -0.14 -1.08 16.84 44.97 0.76 -0.32 16 18 C -0.14 0.33 10.03 22.31 0.22 0.55 16 19 C -0.07 0.47 9.71 22.27 0.22 0.68 16 20 C -0.14 0.75 7.25 31.12 0.23 0.97 16 21 C -0.14 0.34 10.46 23.65 0.25 0.59 16 22 C -0.06 0.11 6.20 24.76 0.15 0.26 16 23 C -0.02 0.09 2.97 71.24 0.21 0.31 16 24 O -0.54 2.90 12.86 -148.98 -1.92 0.99 16 25 Si 0.77 -2.75 32.09 68.60 2.20 -0.55 16 26 O -0.17 -0.14 8.89 4.51 0.04 -0.10 16 27 H 0.10 -0.27 8.14 -2.39 -0.02 -0.29 16 28 H 0.10 0.27 6.49 -2.39 -0.02 0.25 16 29 H 0.10 -0.38 8.14 -2.38 -0.02 -0.40 16 30 H 0.41 -3.54 7.87 -92.71 -0.73 -4.27 16 31 H 0.10 -0.75 7.73 -2.38 -0.02 -0.77 16 32 H 0.09 -0.87 8.14 -2.39 -0.02 -0.89 16 33 H 0.15 -0.63 6.64 -2.91 -0.02 -0.65 16 34 H 0.16 -0.97 8.06 -2.91 -0.02 -1.00 16 35 H 0.17 -2.11 8.05 -2.91 -0.02 -2.13 16 36 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 37 H 0.10 -0.48 6.29 -2.39 -0.02 -0.50 16 38 H 0.18 -1.38 7.74 -2.91 -0.02 -1.40 16 39 H 0.14 -0.80 7.96 -2.39 -0.02 -0.82 16 40 H 0.40 -5.06 8.70 -74.06 -0.64 -5.70 16 41 H -0.28 -0.57 7.11 99.48 0.71 0.13 16 42 H -0.30 -1.14 7.11 99.48 0.71 -0.43 16 Total: 0.00 -20.03 377.64 1.88 -18.16 By element: Atomic # 1 Polarization: -20.38 SS G_CDS: -0.23 Total: -20.62 kcal Atomic # 6 Polarization: 5.66 SS G_CDS: 3.49 Total: 9.16 kcal Atomic # 7 Polarization: 2.15 SS G_CDS: -2.33 Total: -0.18 kcal Atomic # 8 Polarization: -3.29 SS G_CDS: -1.94 Total: -5.23 kcal Atomic # 9 Polarization: -1.08 SS G_CDS: 0.76 Total: -0.32 kcal Atomic # 14 Polarization: -2.75 SS G_CDS: 2.20 Total: -0.55 kcal Atomic # 17 Polarization: -0.34 SS G_CDS: -0.08 Total: -0.42 kcal Total: -20.03 1.88 -18.16 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10156534_13308374.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.476 kcal (2) G-P(sol) polarization free energy of solvation -20.032 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.508 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.876 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.156 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.631 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds