Wall clock time and date at job start Sat Mar 6 2021 11:51:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86299 * 109.47004 * 2 1 4 4 C 1.50706 * 109.47147 * 240.00515 * 2 1 3 5 5 C 1.38244 * 119.97491 * 119.72203 * 4 2 1 6 6 C 1.38283 * 120.11200 * 179.76679 * 5 4 2 7 7 C 1.38130 * 120.05429 * 0.50914 * 6 5 4 8 8 C 1.38751 * 119.94324 * 359.74770 * 7 6 5 9 9 O 1.35900 * 120.05239 * 179.97438 * 8 7 6 10 10 C 1.42897 * 117.00288 * 0.02562 * 9 8 7 11 11 C 1.52997 * 109.47089 * 180.02562 * 10 9 8 12 12 C 1.53000 * 109.47094 * 180.02562 * 11 10 9 13 13 C 1.50703 * 109.47449 * 180.02562 * 12 11 10 14 14 O 1.21284 * 119.99857 * 359.97438 * 13 12 11 15 15 N 1.34773 * 120.00341 * 179.97438 * 13 12 11 16 16 C 1.46497 * 120.00179 * 179.97438 * 15 13 12 17 17 H 1.09000 * 112.85306 * 336.20264 * 16 15 13 18 18 C 1.53790 * 113.61090 * 107.50422 * 16 15 13 19 19 C 1.53778 * 87.07653 * 89.11717 * 18 16 15 20 20 H 1.08999 * 113.61611 * 270.87610 * 19 18 16 21 21 C 1.50708 * 113.68390 * 139.99254 * 19 18 16 22 22 C 1.38213 * 119.96605 * 142.46564 * 21 19 18 23 23 C 1.38319 * 120.01353 * 179.97438 * 22 21 19 24 24 Cl 1.73596 * 120.02805 * 179.97438 * 23 22 21 25 25 C 1.38553 * 119.94858 * 0.02562 * 23 22 21 26 26 F 1.35103 * 120.02751 * 179.97438 * 25 23 22 27 27 C 1.38446 * 119.93876 * 0.02562 * 25 23 22 28 28 C 1.38194 * 119.98326 * 359.69348 * 27 25 23 29 29 C 1.53776 * 113.61806 * 205.00280 * 16 15 13 30 30 C 1.38166 * 119.96660 * 299.99525 * 4 2 1 31 31 H 0.96695 * 114.00385 * 60.00159 * 1 2 3 32 32 H 1.09001 * 109.47626 * 120.00659 * 2 1 3 33 33 H 1.48493 * 110.00250 * 298.68268 * 3 2 1 34 34 H 1.48504 * 109.99999 * 60.00466 * 3 2 1 35 35 H 1.08001 * 119.94451 * 359.97438 * 5 4 2 36 36 H 1.07998 * 119.97599 * 180.23111 * 6 5 4 37 37 H 1.07996 * 120.02813 * 179.72007 * 7 6 5 38 38 H 1.08996 * 109.46899 * 300.00586 * 10 9 8 39 39 H 1.08997 * 109.47080 * 60.00416 * 10 9 8 40 40 H 1.08996 * 109.47624 * 300.00015 * 11 10 9 41 41 H 1.09002 * 109.47345 * 59.99999 * 11 10 9 42 42 H 1.09007 * 109.47154 * 300.00089 * 12 11 10 43 43 H 1.08997 * 109.47166 * 60.00233 * 12 11 10 44 44 H 0.96998 * 119.99891 * 359.97438 * 15 13 12 45 45 H 1.09001 * 113.60992 * 203.67051 * 18 16 15 46 46 H 1.08995 * 113.61348 * 334.56875 * 18 16 15 47 47 H 1.07998 * 119.99730 * 359.97438 * 22 21 19 48 48 H 1.08003 * 120.00379 * 180.02562 * 27 25 23 49 49 H 1.08005 * 119.97498 * 180.29837 * 28 27 25 50 50 H 1.08998 * 113.61689 * 25.42790 * 29 16 15 51 51 H 1.08994 * 113.62029 * 156.34345 * 29 16 15 52 52 H 1.07999 * 120.03143 * 359.96296 * 30 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2306 5 6 2.7213 -0.0362 -2.1431 6 6 3.1878 -0.6866 -3.2707 7 6 2.8566 -2.0090 -3.4934 8 6 2.0594 -2.6863 -2.5817 9 8 1.7318 -3.9872 -2.7988 10 6 2.2433 -4.5956 -3.9863 11 6 1.7718 -6.0493 -4.0582 12 6 2.3200 -6.7010 -5.3293 13 6 1.8552 -8.1327 -5.4006 14 8 1.1548 -8.5874 -4.5210 15 7 2.2178 -8.9080 -6.4417 16 6 1.7663 -10.3000 -6.5106 17 1 1.5177 -10.7133 -5.5331 18 6 0.6866 -10.5452 -7.5779 19 6 1.8348 -10.8129 -8.5651 20 1 2.1894 -9.9175 -9.0755 21 6 1.5676 -11.9573 -9.5086 22 6 1.9918 -11.8826 -10.8220 23 6 1.7475 -12.9326 -11.6886 24 17 2.2795 -12.8389 -13.3384 25 6 1.0770 -14.0587 -11.2393 26 9 0.8372 -15.0850 -12.0846 27 6 0.6522 -14.1309 -9.9236 28 6 0.9027 -13.0828 -9.0585 29 6 2.6865 -11.2054 -7.3462 30 6 1.5972 -2.0331 -1.4486 31 1 -0.3934 0.4416 -0.7650 32 1 1.7924 -0.5139 0.8899 33 1 1.5878 2.4586 -1.2241 34 1 1.5615 2.4679 1.2086 35 1 2.9774 0.9992 -1.9732 36 1 3.8079 -0.1590 -3.9802 37 1 3.2174 -2.5152 -4.3765 38 1 1.8795 -4.0524 -4.8585 39 1 3.3327 -4.5670 -3.9689 40 1 2.1352 -6.5928 -3.1861 41 1 0.6823 -6.0776 -4.0758 42 1 1.9570 -6.1576 -6.2018 43 1 3.4095 -6.6728 -5.3113 44 1 2.7776 -8.5443 -7.1454 45 1 0.0679 -11.4205 -7.3799 46 1 0.1014 -9.6578 -7.8189 47 1 2.5140 -11.0043 -11.1716 48 1 0.1298 -15.0084 -9.5721 49 1 0.5754 -13.1412 -8.0309 50 1 3.7157 -10.8509 -7.4005 51 1 2.6145 -12.2612 -7.0852 52 1 0.9768 -2.5582 -0.7374 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10156534_4549616.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:51:07 Heat of formation + Delta-G solvation = -80.395383 kcal Electronic energy + Delta-G solvation = -34741.089398 eV Core-core repulsion = 29613.495002 eV Total energy + Delta-G solvation = -5127.594396 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 420.134 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -50.05869 -41.63214 -41.25199 -40.43933 -39.24822 -38.86080 -37.56103 -37.40876 -34.88505 -34.44258 -32.45610 -32.17128 -31.50072 -31.10436 -28.41206 -26.87080 -26.67625 -25.99535 -24.32908 -23.77990 -23.56712 -22.68863 -21.88880 -21.43731 -20.20658 -19.23145 -18.98514 -18.26030 -17.90678 -17.71078 -17.45050 -17.28627 -17.06392 -16.87042 -16.79663 -16.78466 -16.38635 -16.15457 -15.86068 -15.52884 -15.43179 -14.99573 -14.86360 -14.76024 -14.63435 -14.38569 -14.29246 -14.20569 -14.10431 -13.82079 -13.57728 -13.42117 -13.24530 -13.20135 -13.07338 -12.72273 -12.59082 -12.50406 -12.34478 -12.30175 -12.26898 -11.93526 -11.82457 -11.62523 -11.58320 -11.54614 -11.26470 -10.94381 -10.67813 -10.07256 -10.03990 -9.90808 -9.59501 -9.22975 -4.90571 -0.15084 0.01298 0.23031 0.42636 0.92641 1.30005 1.62401 1.62551 1.91537 2.00141 2.31221 2.39903 2.69367 3.02383 3.40033 3.45001 3.51158 3.62737 3.67480 3.69098 3.72457 3.86646 3.90137 3.94925 3.99928 4.03832 4.10991 4.13175 4.16758 4.22915 4.26858 4.37082 4.44189 4.46613 4.53429 4.56777 4.63985 4.67941 4.71215 4.78733 4.82205 4.85387 4.88348 4.97712 5.00704 5.03183 5.04171 5.09114 5.17288 5.19938 5.30742 5.39877 5.40403 5.46940 5.63542 5.65978 5.76468 6.44931 6.46327 6.56588 7.28615 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.092 4.092 3 Si 0.782 3.218 4 C -0.082 4.082 5 C -0.160 4.160 6 C -0.073 4.073 7 C -0.205 4.205 8 C 0.116 3.884 9 O -0.340 6.340 10 C 0.057 3.943 11 C -0.102 4.102 12 C -0.127 4.127 13 C 0.511 3.489 14 O -0.589 6.589 15 N -0.701 5.701 16 C 0.112 3.888 17 H 0.082 0.918 18 C -0.144 4.144 19 C -0.063 4.063 20 H 0.121 0.879 21 C -0.064 4.064 22 C -0.080 4.080 23 C -0.086 4.086 24 Cl -0.062 7.062 25 C 0.077 3.923 26 F -0.143 7.143 27 C -0.139 4.139 28 C -0.081 4.081 29 C -0.125 4.125 30 C -0.153 4.153 31 H 0.386 0.614 32 H 0.121 0.879 33 H -0.278 1.278 34 H -0.304 1.304 35 H 0.148 0.852 36 H 0.159 0.841 37 H 0.154 0.846 38 H 0.082 0.918 39 H 0.085 0.915 40 H 0.059 0.941 41 H 0.058 0.942 42 H 0.128 0.872 43 H 0.129 0.871 44 H 0.419 0.581 45 H 0.099 0.901 46 H 0.070 0.930 47 H 0.160 0.840 48 H 0.159 0.841 49 H 0.162 0.838 50 H 0.091 0.909 51 H 0.102 0.898 52 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.271 3.845 -3.427 8.910 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.200 4.200 3 Si 0.686 3.314 4 C -0.083 4.083 5 C -0.178 4.178 6 C -0.090 4.090 7 C -0.223 4.223 8 C 0.071 3.929 9 O -0.254 6.254 10 C -0.017 4.017 11 C -0.141 4.141 12 C -0.167 4.167 13 C 0.299 3.701 14 O -0.469 6.469 15 N -0.353 5.353 16 C 0.006 3.994 17 H 0.100 0.900 18 C -0.182 4.182 19 C -0.081 4.081 20 H 0.139 0.861 21 C -0.064 4.064 22 C -0.098 4.098 23 C -0.113 4.113 24 Cl -0.033 7.033 25 C 0.057 3.943 26 F -0.122 7.122 27 C -0.158 4.158 28 C -0.099 4.099 29 C -0.163 4.163 30 C -0.172 4.172 31 H 0.235 0.765 32 H 0.138 0.862 33 H -0.204 1.204 34 H -0.233 1.233 35 H 0.165 0.835 36 H 0.177 0.823 37 H 0.172 0.828 38 H 0.101 0.899 39 H 0.103 0.897 40 H 0.078 0.922 41 H 0.077 0.923 42 H 0.146 0.854 43 H 0.147 0.853 44 H 0.257 0.743 45 H 0.117 0.883 46 H 0.088 0.912 47 H 0.178 0.822 48 H 0.176 0.824 49 H 0.179 0.821 50 H 0.110 0.890 51 H 0.120 0.880 52 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges 6.587 3.848 -2.349 7.982 hybrid contribution -1.286 -0.779 -1.242 1.950 sum 5.301 3.069 -3.591 7.100 Atomic orbital electron populations 1.86571 1.18663 1.80531 1.50119 1.25433 0.83440 1.12677 0.98476 0.93898 0.90118 0.70928 0.76425 1.20134 0.97876 0.93343 0.96915 1.21188 1.00365 1.00861 0.95362 1.21310 0.97386 0.93530 0.96810 1.21609 1.02667 0.96851 1.01220 1.19197 0.95221 0.83582 0.94893 1.86054 1.71701 1.22892 1.44773 1.23003 0.99756 0.93164 0.85765 1.21157 1.01502 0.92972 0.98426 1.21538 1.04716 0.90610 0.99820 1.21171 0.78983 0.89190 0.80735 1.90744 1.39699 1.75978 1.40458 1.45583 1.53278 1.11371 1.25072 1.21833 0.96302 0.82198 0.99102 0.89971 1.23586 0.96560 1.02980 0.95084 1.21639 0.97616 0.96016 0.92830 0.86143 1.19904 0.97104 0.96191 0.93203 1.21116 0.99108 0.97410 0.92189 1.21225 1.04850 0.97122 0.88147 1.98401 1.88905 1.98274 1.17752 1.17832 1.01822 0.85166 0.89479 1.91515 1.92611 1.57310 1.70743 1.21402 1.01827 1.02131 0.90445 1.21303 0.96223 0.91399 1.00948 1.23399 0.99166 1.00642 0.93053 1.20325 1.04180 0.94934 0.97735 0.76479 0.86169 1.20428 1.23300 0.83511 0.82317 0.82824 0.89939 0.89677 0.92170 0.92339 0.85412 0.85267 0.74317 0.88300 0.91158 0.82237 0.82351 0.82057 0.89038 0.87952 0.86695 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -2.74 12.77 -148.98 -1.90 -4.64 16 2 C -0.09 -0.12 2.82 71.24 0.20 0.08 16 3 Si 0.78 -1.53 29.79 68.60 2.04 0.51 16 4 C -0.08 -0.16 5.39 -19.88 -0.11 -0.27 16 5 C -0.16 0.29 8.67 22.28 0.19 0.48 16 6 C -0.07 0.25 10.04 22.25 0.22 0.47 16 7 C -0.21 0.33 9.04 22.37 0.20 0.53 16 8 C 0.12 0.48 6.69 22.51 0.15 0.63 16 9 O -0.34 -1.77 10.14 -92.42 -0.94 -2.71 16 10 C 0.06 -0.21 4.74 71.98 0.34 0.13 16 11 C -0.10 0.15 4.87 30.59 0.15 0.30 16 12 C -0.13 1.12 5.70 29.85 0.17 1.29 16 13 C 0.51 -0.77 7.83 87.66 0.69 -0.08 16 14 O -0.59 -5.83 15.58 -3.04 -0.05 -5.88 16 15 N -0.70 5.38 5.26 -440.03 -2.32 3.06 16 16 C 0.11 -0.66 4.32 45.52 0.20 -0.46 16 17 H 0.08 -0.02 7.46 -2.39 -0.02 -0.04 16 18 C -0.14 1.04 7.26 31.12 0.23 1.26 16 19 C -0.06 0.63 3.85 -11.01 -0.04 0.59 16 20 H 0.12 -1.60 8.09 -2.39 -0.02 -1.62 16 21 C -0.06 0.39 5.29 -19.86 -0.11 0.29 16 22 C -0.08 0.28 9.49 22.28 0.21 0.49 16 23 C -0.09 -0.16 6.33 22.36 0.14 -0.02 16 24 Cl -0.06 -0.24 28.62 -2.72 -0.08 -0.32 16 25 C 0.08 0.24 7.28 22.39 0.16 0.40 16 26 F -0.14 -1.04 16.84 44.97 0.76 -0.29 16 27 C -0.14 0.28 10.03 22.31 0.22 0.51 16 28 C -0.08 0.46 8.60 22.26 0.19 0.65 16 29 C -0.12 1.26 7.29 31.12 0.23 1.49 16 30 C -0.15 -0.89 9.55 22.37 0.21 -0.68 16 31 H 0.39 -0.38 8.70 -74.06 -0.64 -1.02 16 32 H 0.12 0.05 7.96 -2.39 -0.02 0.03 16 33 H -0.28 -0.28 7.10 99.48 0.71 0.43 16 34 H -0.30 -1.81 7.11 99.48 0.71 -1.11 16 35 H 0.15 -0.91 4.87 -2.91 -0.01 -0.92 16 36 H 0.16 -1.50 8.06 -2.91 -0.02 -1.52 16 37 H 0.15 -1.12 6.30 -2.91 -0.02 -1.14 16 38 H 0.08 -0.61 7.66 -2.39 -0.02 -0.63 16 39 H 0.09 -0.66 7.66 -2.39 -0.02 -0.68 16 40 H 0.06 0.19 8.10 -2.39 -0.02 0.17 16 41 H 0.06 0.20 8.10 -2.39 -0.02 0.18 16 42 H 0.13 -1.82 8.14 -2.38 -0.02 -1.84 16 43 H 0.13 -1.86 8.14 -2.39 -0.02 -1.88 16 44 H 0.42 -6.14 8.70 -92.71 -0.81 -6.94 16 45 H 0.10 -0.76 6.33 -2.39 -0.02 -0.77 16 46 H 0.07 -0.37 8.14 -2.39 -0.02 -0.39 16 47 H 0.16 -1.21 8.05 -2.91 -0.02 -1.23 16 48 H 0.16 -0.83 8.06 -2.91 -0.02 -0.85 16 49 H 0.16 -1.64 6.68 -2.91 -0.02 -1.66 16 50 H 0.09 -1.07 8.14 -2.39 -0.02 -1.09 16 51 H 0.10 -1.03 7.71 -2.39 -0.02 -1.05 16 52 H 0.11 0.96 8.06 -2.91 -0.02 0.94 16 Total: 0.00 -27.73 447.39 0.95 -26.78 By element: Atomic # 1 Polarization: -24.20 SS G_CDS: -0.43 Total: -24.63 kcal Atomic # 6 Polarization: 4.24 SS G_CDS: 3.86 Total: 8.10 kcal Atomic # 7 Polarization: 5.38 SS G_CDS: -2.32 Total: 3.06 kcal Atomic # 8 Polarization: -10.34 SS G_CDS: -2.89 Total: -13.23 kcal Atomic # 9 Polarization: -1.04 SS G_CDS: 0.76 Total: -0.29 kcal Atomic # 14 Polarization: -1.53 SS G_CDS: 2.04 Total: 0.51 kcal Atomic # 17 Polarization: -0.24 SS G_CDS: -0.08 Total: -0.32 kcal Total: -27.73 0.95 -26.78 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10156534_4549616.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.613 kcal (2) G-P(sol) polarization free energy of solvation -27.735 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.348 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.952 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.783 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.395 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds