Wall clock time and date at job start Sat Mar 6 2021 11:51:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35997 * 117.00260 * 2 1 4 4 C 1.39147 * 120.07210 * 180.02562 * 3 2 1 5 5 O 1.36003 * 120.07527 * 359.97438 * 4 3 2 6 6 C 1.42901 * 116.99891 * 179.72963 * 5 4 3 7 7 C 1.50697 * 109.46537 * 180.02562 * 6 5 4 8 8 O 1.21278 * 120.00811 * 359.97438 * 7 6 5 9 9 N 1.34781 * 119.99740 * 179.97438 * 7 6 5 10 10 C 1.46498 * 120.00389 * 179.97438 * 9 7 6 11 11 H 1.09007 * 112.90312 * 336.25896 * 10 9 7 12 12 C 1.53783 * 113.61337 * 107.50079 * 10 9 7 13 13 C 1.53774 * 87.08045 * 89.12291 * 12 10 9 14 14 H 1.09007 * 113.68978 * 270.87423 * 13 12 10 15 15 C 1.50699 * 113.61622 * 139.98300 * 13 12 10 16 16 C 1.38215 * 119.96751 * 142.50076 * 15 13 12 17 17 C 1.38321 * 120.01022 * 179.97438 * 16 15 13 18 18 Cl 1.73608 * 120.02736 * 179.97438 * 17 16 15 19 19 C 1.38552 * 119.95186 * 0.02562 * 17 16 15 20 20 F 1.35101 * 120.03161 * 179.97438 * 19 17 16 21 21 C 1.38442 * 119.93747 * 0.02562 * 19 17 16 22 22 C 1.38192 * 119.98817 * 359.97438 * 21 19 17 23 23 C 1.53779 * 113.61887 * 205.00062 * 10 9 7 24 24 C 1.38563 * 119.85299 * 179.72721 * 4 3 2 25 25 C 1.38239 * 119.99834 * 0.26923 * 24 4 3 26 26 N 1.48005 * 119.92489 * 180.02562 * 25 24 4 27 27 O 1.21803 * 120.00605 * 0.02562 * 26 25 24 28 28 O 1.21804 * 119.99931 * 180.02562 * 26 25 24 29 29 C 1.38245 * 120.14967 * 0.02781 * 25 24 4 30 30 C 1.50696 * 119.93013 * 179.97438 * 29 25 24 31 31 O 1.42897 * 109.47442 * 74.99686 * 30 29 25 32 32 Si 1.86308 * 109.47066 * 194.99882 * 30 29 25 33 33 C 1.38247 * 120.14589 * 359.97438 * 29 25 24 34 34 H 1.08994 * 109.47226 * 179.97438 * 1 2 3 35 35 H 1.08992 * 109.46687 * 300.00205 * 1 2 3 36 36 H 1.08996 * 109.46490 * 59.99835 * 1 2 3 37 37 H 1.08997 * 109.47064 * 60.00249 * 6 5 4 38 38 H 1.09003 * 109.47110 * 299.99471 * 6 5 4 39 39 H 0.97005 * 119.99998 * 359.97438 * 9 7 6 40 40 H 1.08995 * 113.61598 * 334.56801 * 12 10 9 41 41 H 1.09003 * 113.61319 * 203.67141 * 12 10 9 42 42 H 1.08004 * 119.99905 * 359.72547 * 16 15 13 43 43 H 1.07996 * 120.00609 * 179.97438 * 21 19 17 44 44 H 1.08000 * 119.97699 * 179.97438 * 22 21 19 45 45 H 1.09002 * 113.61230 * 156.33786 * 23 10 9 46 46 H 1.08997 * 113.61126 * 25.43450 * 23 10 9 47 47 H 1.08002 * 120.00107 * 180.25088 * 24 4 3 48 48 H 1.09005 * 109.47073 * 314.99493 * 30 29 25 49 49 H 0.96693 * 113.99954 * 59.99999 * 31 30 29 50 50 H 1.48493 * 110.00084 * 58.67900 * 32 30 29 51 51 H 1.48498 * 109.99709 * 179.97438 * 32 30 29 52 52 H 1.07996 * 120.00077 * 180.02562 * 33 29 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2117 0.0000 4 6 3.4360 1.2862 -0.0005 5 8 4.1796 0.1475 -0.0005 6 6 5.6004 0.3005 -0.0071 7 6 6.2518 -1.0584 -0.0067 8 8 5.5670 -2.0594 -0.0009 9 7 7.5956 -1.1615 -0.0129 10 6 8.2290 -2.4825 -0.0119 11 1 7.5856 -3.2612 0.3978 12 6 8.8710 -2.8588 -1.3578 13 6 10.1542 -2.1844 -0.8447 14 1 10.2107 -1.1199 -1.0725 15 6 11.4136 -2.9282 -1.2077 16 6 12.5556 -2.2276 -1.5472 17 6 13.7122 -2.9093 -1.8800 18 17 15.1468 -2.0298 -2.3072 19 6 13.7248 -4.2948 -1.8732 20 9 14.8535 -4.9623 -2.1985 21 6 12.5795 -4.9945 -1.5338 22 6 11.4253 -4.3108 -1.2018 23 6 9.6497 -2.4842 0.5767 24 6 4.0604 2.5232 -0.0063 25 6 3.3031 3.6797 -0.0058 26 7 3.9717 5.0001 -0.0125 27 8 5.1879 5.0670 -0.0189 28 8 3.3058 6.0200 -0.0116 29 6 1.9226 3.6057 0.0010 30 6 1.1019 4.8696 0.0020 31 8 1.1288 5.4561 -1.3007 32 14 -0.6571 4.4674 0.4659 33 6 1.2933 2.3748 0.0067 34 1 -0.3633 -1.0276 -0.0005 35 1 -0.3632 0.5138 0.8899 36 1 -0.3632 0.5139 -0.8900 37 1 5.9104 0.8527 0.8800 38 1 5.9028 0.8477 -0.9000 39 1 8.1435 -0.3610 -0.0179 40 1 8.4228 -2.3518 -2.2122 41 1 8.9725 -3.9337 -1.5077 42 1 12.5439 -1.1476 -1.5566 43 1 12.5879 -6.0744 -1.5285 44 1 10.5318 -4.8568 -0.9374 45 1 9.9642 -3.4566 0.9556 46 1 9.8302 -1.6746 1.2839 47 1 5.1387 2.5838 -0.0108 48 1 1.5169 5.5717 0.7252 49 1 0.7736 4.8859 -1.9962 50 1 -0.6955 3.8278 1.8055 51 1 -1.4767 5.7057 0.4712 52 1 0.2148 2.3197 0.0116 There are 82 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 82 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10156534_4549636.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:51:26 Heat of formation + Delta-G solvation = -87.917126 kcal Electronic energy + Delta-G solvation = -43359.925569 eV Core-core repulsion = 37237.843997 eV Total energy + Delta-G solvation = -6122.081572 eV No. of doubly occupied orbitals = 82 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 467.112 amu Computer time = 1.65 seconds Orbital eigenvalues (eV) -50.05205 -43.39337 -42.12216 -41.62659 -40.63695 -39.70040 -39.22044 -38.72061 -37.72608 -37.54402 -37.12058 -34.66480 -32.67147 -32.55511 -32.16253 -31.50682 -29.73781 -28.73198 -27.90654 -26.67810 -26.19602 -25.68627 -24.31545 -23.92680 -23.23640 -22.80395 -21.98846 -20.78098 -20.26915 -19.83765 -19.50090 -19.01179 -18.73891 -18.66347 -18.31408 -17.85891 -17.72358 -17.64557 -17.34900 -17.11864 -16.86520 -16.82598 -16.71344 -16.38653 -16.08151 -15.91081 -15.75996 -15.53879 -15.28486 -15.00832 -14.83745 -14.69418 -14.47215 -14.37987 -14.29438 -13.95794 -13.87018 -13.77764 -13.55587 -13.44710 -13.39859 -13.01636 -12.66376 -12.60204 -12.51851 -12.47087 -12.42568 -12.35366 -12.31560 -12.26664 -12.20943 -11.82379 -11.77583 -11.63306 -11.27801 -11.07563 -10.52935 -10.45103 -10.16766 -10.04830 -9.58890 -9.48051 -5.13267 -1.35904 -0.42559 -0.14179 0.02250 0.16941 0.31263 0.93472 1.13293 1.24697 1.39380 1.57630 1.90577 1.90834 1.94408 2.32093 2.34783 2.98815 3.03313 3.18393 3.28161 3.43691 3.46845 3.50519 3.53887 3.56856 3.68487 3.70405 3.89420 3.92059 3.95131 3.99513 4.04475 4.06911 4.11685 4.12418 4.17464 4.23415 4.40459 4.42782 4.53774 4.55692 4.64122 4.74230 4.79320 4.82044 4.83415 4.85440 4.86823 4.95104 5.04659 5.10237 5.15460 5.25709 5.35778 5.55880 5.63189 5.65067 6.07148 6.40384 6.47046 6.71979 7.09512 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.005 4.005 2 O -0.307 6.307 3 C 0.171 3.829 4 C 0.101 3.899 5 O -0.290 6.290 6 C 0.025 3.975 7 C 0.520 3.480 8 O -0.564 6.564 9 N -0.693 5.693 10 C 0.115 3.885 11 H 0.088 0.912 12 C -0.143 4.143 13 C -0.065 4.065 14 H 0.120 0.880 15 C -0.063 4.063 16 C -0.081 4.081 17 C -0.087 4.087 18 Cl -0.064 7.064 19 C 0.077 3.923 20 F -0.144 7.144 21 C -0.139 4.139 22 C -0.080 4.080 23 C -0.124 4.124 24 C -0.109 4.109 25 C -0.047 4.047 26 N 0.036 4.964 27 O -0.185 6.185 28 O -0.168 6.168 29 C -0.040 4.040 30 C -0.092 4.092 31 O -0.536 6.536 32 Si 0.786 3.214 33 C -0.163 4.163 34 H 0.121 0.879 35 H 0.080 0.920 36 H 0.093 0.907 37 H 0.128 0.872 38 H 0.129 0.871 39 H 0.421 0.579 40 H 0.072 0.928 41 H 0.103 0.897 42 H 0.159 0.841 43 H 0.159 0.841 44 H 0.165 0.835 45 H 0.106 0.894 46 H 0.091 0.909 47 H 0.184 0.816 48 H 0.114 0.886 49 H 0.393 0.607 50 H -0.271 1.271 51 H -0.291 1.291 52 H 0.193 0.807 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.936 -3.845 0.279 7.078 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.098 4.098 2 O -0.218 6.218 3 C 0.122 3.878 4 C 0.054 3.946 5 O -0.202 6.202 6 C -0.052 4.052 7 C 0.306 3.694 8 O -0.441 6.441 9 N -0.347 5.347 10 C 0.009 3.991 11 H 0.107 0.893 12 C -0.181 4.181 13 C -0.084 4.084 14 H 0.138 0.862 15 C -0.064 4.064 16 C -0.099 4.099 17 C -0.114 4.114 18 Cl -0.035 7.035 19 C 0.057 3.943 20 F -0.122 7.122 21 C -0.158 4.158 22 C -0.098 4.098 23 C -0.162 4.162 24 C -0.129 4.129 25 C -0.131 4.131 26 N 0.549 4.451 27 O -0.396 6.396 28 O -0.381 6.381 29 C -0.042 4.042 30 C -0.199 4.199 31 O -0.343 6.343 32 Si 0.689 3.311 33 C -0.182 4.182 34 H 0.140 0.860 35 H 0.098 0.902 36 H 0.112 0.888 37 H 0.145 0.855 38 H 0.146 0.854 39 H 0.259 0.741 40 H 0.090 0.910 41 H 0.121 0.879 42 H 0.176 0.824 43 H 0.177 0.823 44 H 0.182 0.818 45 H 0.124 0.876 46 H 0.110 0.890 47 H 0.201 0.799 48 H 0.132 0.868 49 H 0.242 0.758 50 H -0.198 1.198 51 H -0.218 1.218 52 H 0.210 0.790 Dipole moment (debyes) X Y Z Total from point charges -6.901 -4.916 1.123 8.547 hybrid contribution 1.994 1.202 -0.032 2.328 sum -4.907 -3.714 1.091 6.250 Atomic orbital electron populations 1.23816 0.74695 1.07100 1.04188 1.86334 1.24847 1.24478 1.86175 1.18675 0.89187 0.86370 0.93532 1.17950 0.88804 0.85110 1.02751 1.86304 1.18492 1.26733 1.88712 1.22930 0.78811 0.96205 1.07303 1.20262 0.83064 0.90312 0.75780 1.90787 1.63905 1.39734 1.49724 1.45359 1.05017 1.09889 1.74413 1.21881 0.94246 0.85075 0.97858 0.89338 1.23602 0.94789 1.02389 0.97321 1.21670 0.89394 1.00353 0.96944 0.86188 1.19898 0.94770 0.93641 0.98062 1.21120 0.89614 1.01693 0.97487 1.21237 0.91244 0.90784 1.08166 1.98403 1.37851 1.75472 1.91750 1.17843 0.84227 0.88748 1.03515 1.91514 1.49847 1.80530 1.90328 1.21408 0.91042 1.02189 1.01130 1.21318 0.98034 0.93847 0.96556 1.23420 0.92260 1.04726 0.95815 1.20906 1.03023 0.88115 1.00865 1.20562 0.92767 0.81925 1.17837 1.43729 1.00821 1.03455 0.97141 1.94499 0.96524 1.94126 1.54458 1.94582 1.64420 1.25439 1.53675 1.20218 0.91086 0.97648 0.95294 1.25762 1.10576 0.92825 0.90783 1.86669 1.86992 1.44622 1.16036 0.94406 0.71820 0.82178 0.82737 1.21080 1.01766 0.88110 1.07213 0.86042 0.90190 0.88842 0.85481 0.85357 0.74055 0.90959 0.87892 0.82382 0.82297 0.81803 0.87600 0.89001 0.79883 0.86841 0.75809 1.19752 1.21829 0.79015 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 0.05 9.81 113.37 1.11 1.16 16 2 O -0.31 0.47 10.28 -79.65 -0.82 -0.35 16 3 C 0.17 -0.39 6.70 22.57 0.15 -0.24 16 4 C 0.10 -0.08 6.70 22.57 0.15 0.07 16 5 O -0.29 -0.42 9.46 -67.17 -0.64 -1.06 16 6 C 0.03 -0.16 5.22 71.24 0.37 0.21 16 7 C 0.52 -0.78 7.91 87.66 0.69 -0.09 16 8 O -0.56 -5.52 16.10 16.01 0.26 -5.26 16 9 N -0.69 5.96 5.26 -440.03 -2.32 3.64 16 10 C 0.11 -0.85 4.32 45.52 0.20 -0.65 16 11 H 0.09 -0.21 7.47 -2.38 -0.02 -0.23 16 12 C -0.14 1.24 7.25 31.12 0.23 1.46 16 13 C -0.07 0.71 3.86 -11.02 -0.04 0.67 16 14 H 0.12 -1.65 8.09 -2.38 -0.02 -1.67 16 15 C -0.06 0.42 5.29 -19.86 -0.11 0.32 16 16 C -0.08 0.29 9.49 22.28 0.21 0.50 16 17 C -0.09 -0.16 6.33 22.36 0.14 -0.02 16 18 Cl -0.06 -0.27 28.62 -2.72 -0.08 -0.35 16 19 C 0.08 0.22 7.28 22.39 0.16 0.39 16 20 F -0.14 -1.04 16.84 44.97 0.76 -0.28 16 21 C -0.14 0.36 10.03 22.31 0.22 0.58 16 22 C -0.08 0.52 8.61 22.26 0.19 0.71 16 23 C -0.12 1.40 7.29 31.12 0.23 1.62 16 24 C -0.11 0.20 8.54 22.35 0.19 0.40 16 25 C -0.05 -0.11 6.84 36.38 0.25 0.14 16 26 N 0.04 0.31 4.45 -46.47 -0.21 0.11 16 27 O -0.18 -1.80 18.44 18.88 0.35 -1.45 16 28 O -0.17 -2.06 14.62 25.10 0.37 -1.70 16 29 C -0.04 0.06 5.26 -19.86 -0.10 -0.05 16 30 C -0.09 0.05 1.74 71.23 0.12 0.17 16 31 O -0.54 -0.35 11.80 -129.62 -1.53 -1.88 16 32 Si 0.79 -4.58 29.91 68.60 2.05 -2.53 16 33 C -0.16 1.00 7.65 22.35 0.17 1.17 16 34 H 0.12 -1.52 8.14 -2.39 -0.02 -1.54 16 35 H 0.08 -1.12 7.65 -2.39 -0.02 -1.13 16 36 H 0.09 -1.50 7.68 -2.39 -0.02 -1.52 16 37 H 0.13 -1.55 7.66 -2.39 -0.02 -1.57 16 38 H 0.13 -1.59 7.66 -2.39 -0.02 -1.61 16 39 H 0.42 -6.54 8.70 -92.70 -0.81 -7.35 16 40 H 0.07 -0.49 8.14 -2.39 -0.02 -0.51 16 41 H 0.10 -0.97 6.30 -2.39 -0.02 -0.99 16 42 H 0.16 -1.15 8.05 -2.91 -0.02 -1.17 16 43 H 0.16 -0.93 8.06 -2.91 -0.02 -0.96 16 44 H 0.16 -1.88 6.65 -2.91 -0.02 -1.90 16 45 H 0.11 -1.21 7.72 -2.39 -0.02 -1.23 16 46 H 0.09 -1.16 8.14 -2.39 -0.02 -1.18 16 47 H 0.18 -1.21 5.85 -2.91 -0.02 -1.23 16 48 H 0.11 0.50 6.07 -2.38 -0.01 0.48 16 49 H 0.39 -3.68 8.70 -74.06 -0.64 -4.32 16 50 H -0.27 0.68 7.11 99.48 0.71 1.39 16 51 H -0.29 -0.69 7.11 99.48 0.71 0.02 16 52 H 0.19 -2.56 3.36 -2.91 -0.01 -2.57 16 Total: 0.00 -35.74 456.21 2.40 -33.35 By element: Atomic # 1 Polarization: -30.43 SS G_CDS: -0.35 Total: -30.78 kcal Atomic # 6 Polarization: 3.98 SS G_CDS: 4.54 Total: 8.53 kcal Atomic # 7 Polarization: 6.27 SS G_CDS: -2.52 Total: 3.75 kcal Atomic # 8 Polarization: -9.68 SS G_CDS: -2.01 Total: -11.69 kcal Atomic # 9 Polarization: -1.04 SS G_CDS: 0.76 Total: -0.28 kcal Atomic # 14 Polarization: -4.58 SS G_CDS: 2.05 Total: -2.53 kcal Atomic # 17 Polarization: -0.27 SS G_CDS: -0.08 Total: -0.35 kcal Total: -35.74 2.40 -33.35 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10156534_4549636.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.569 kcal (2) G-P(sol) polarization free energy of solvation -35.744 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.313 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.395 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.348 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.917 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.65 seconds