Wall clock time and date at job start Sat Mar 6 2021 11:52:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86298 * 109.47052 * 2 1 4 4 C 1.50693 * 109.47517 * 120.00373 * 2 1 3 5 5 C 1.35455 * 125.56526 * 245.02832 * 4 2 1 6 6 C 1.39829 * 107.86642 * 179.72977 * 5 4 2 7 7 C 1.37873 * 107.08553 * 0.02562 * 6 5 4 8 8 C 1.46681 * 126.23371 * 179.97438 * 7 6 5 9 9 O 1.21692 * 119.99858 * 0.02562 * 8 7 6 10 10 N 1.34780 * 120.00103 * 180.02562 * 8 7 6 11 11 C 1.46491 * 119.99979 * 180.02562 * 10 8 7 12 12 H 1.09001 * 112.85126 * 336.19557 * 11 10 8 13 13 C 1.53779 * 113.61595 * 107.50222 * 11 10 8 14 14 C 1.53780 * 87.08349 * 89.11715 * 13 11 10 15 15 H 1.09005 * 113.68810 * 270.87681 * 14 13 11 16 16 C 1.50693 * 113.61961 * 139.98431 * 14 13 11 17 17 C 1.38223 * 119.97553 * 142.50225 * 16 14 13 18 18 C 1.38234 * 120.05119 * 180.02562 * 17 16 14 19 19 C 1.38401 * 119.99075 * 359.97438 * 18 17 16 20 20 F 1.35101 * 120.03154 * 179.97438 * 19 18 17 21 21 C 1.38592 * 119.93650 * 0.02562 * 19 18 17 22 22 Cl 1.73602 * 120.02492 * 179.97438 * 21 19 18 23 23 C 1.38267 * 119.96615 * 322.22954 * 16 14 13 24 24 C 1.53781 * 87.08084 * 25.43058 * 14 13 11 25 25 N 1.35538 * 125.56415 * 64.71081 * 4 2 1 26 26 H 0.96697 * 113.99731 * 299.99496 * 1 2 3 27 27 H 1.08999 * 109.46997 * 240.00541 * 2 1 3 28 28 H 1.48499 * 110.00273 * 178.68302 * 3 2 1 29 29 H 1.48505 * 110.00415 * 300.00646 * 3 2 1 30 30 H 1.08001 * 126.06224 * 359.72726 * 5 4 2 31 31 H 1.07997 * 126.45929 * 179.97438 * 6 5 4 32 32 H 0.96999 * 119.99621 * 359.97438 * 10 8 7 33 33 H 1.09004 * 113.61806 * 203.66084 * 13 11 10 34 34 H 1.09003 * 113.61728 * 334.56575 * 13 11 10 35 35 H 1.08004 * 119.96837 * 359.97379 * 17 16 14 36 36 H 1.08002 * 120.00372 * 179.97438 * 18 17 16 37 37 H 1.07995 * 119.99450 * 359.97438 * 23 16 14 38 38 H 1.08995 * 113.61492 * 220.02140 * 24 14 13 39 39 H 1.09002 * 113.60843 * 89.11986 * 24 14 13 40 40 H 0.97000 * 125.67555 * 0.27530 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2303 5 6 2.6326 -0.1393 2.2387 6 6 2.9022 -1.1296 3.1884 7 6 2.3459 -2.3013 2.7209 8 6 2.3818 -3.6058 3.3907 9 8 2.9425 -3.7232 4.4643 10 7 1.7939 -4.6743 2.8169 11 6 1.8294 -5.9770 3.4861 12 1 2.6621 -6.0724 4.1830 13 6 0.4757 -6.4020 4.0791 14 6 0.1717 -7.0498 2.7179 15 1 -0.3081 -6.3749 2.0091 16 6 -0.5285 -8.3799 2.8252 17 6 -1.5066 -8.7212 1.9102 18 6 -2.1503 -9.9407 2.0074 19 6 -1.8150 -10.8210 3.0214 20 9 -2.4439 -12.0128 3.1175 21 6 -0.8341 -10.4783 3.9386 22 17 -0.4122 -11.5805 5.2117 23 6 -0.1879 -9.2601 3.8356 24 6 1.6925 -7.1681 2.5231 25 7 1.7502 -2.0239 1.5114 26 1 -0.3933 0.4416 0.7651 27 1 1.7923 -0.5137 -0.8900 28 1 3.5346 1.7704 0.0321 29 1 1.5614 2.4680 -1.2084 30 1 2.9306 0.8970 2.2985 31 1 3.4447 -1.0011 4.1133 32 1 1.3467 -4.5805 1.9613 33 1 0.5623 -7.1200 4.8947 34 1 -0.1783 -5.5637 4.3195 35 1 -1.7687 -8.0342 1.1191 36 1 -2.9148 -10.2064 1.2923 37 1 0.5799 -8.9944 4.5471 38 1 2.0210 -6.9483 1.5073 39 1 2.1118 -8.0955 2.9133 40 1 1.2795 -2.6622 0.9529 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10156534_6580494.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:52:11 Heat of formation + Delta-G solvation = -16.882447 kcal Electronic energy + Delta-G solvation = -27037.270482 eV Core-core repulsion = 22760.525492 eV Total energy + Delta-G solvation = -4276.744990 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.082 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -50.06832 -42.54334 -41.50934 -40.18460 -38.81198 -37.64772 -37.58382 -34.74900 -32.24581 -32.03261 -31.70450 -31.04615 -27.21513 -26.74886 -25.94712 -24.35814 -23.53488 -22.71161 -21.59367 -21.17187 -20.31274 -19.85483 -18.97242 -18.14489 -17.74542 -17.38286 -16.89210 -16.87509 -16.68444 -16.31312 -15.98539 -15.78259 -15.45306 -15.12603 -15.01506 -14.82112 -14.60395 -14.44053 -14.31411 -14.18384 -14.07179 -13.94531 -13.64352 -13.55900 -13.49036 -12.65214 -12.56103 -12.22146 -12.19835 -12.05887 -11.97510 -11.68510 -11.36360 -11.30680 -10.64071 -10.27492 -10.06681 -10.05326 -9.62005 -9.26588 -4.89468 -0.15463 -0.01261 0.30072 0.91259 1.24921 1.55543 1.73993 1.89770 1.98616 2.23153 2.26032 2.30535 3.00804 3.35917 3.49977 3.54042 3.60053 3.62219 3.63770 3.79526 3.88348 4.00364 4.06655 4.21168 4.27178 4.32485 4.42653 4.47314 4.61119 4.72537 4.79227 4.80615 4.83582 4.90520 4.98014 5.00033 5.02154 5.10345 5.13783 5.33198 5.51706 5.61051 5.63691 5.80639 6.28712 6.46512 6.70282 7.03803 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.052 4.052 3 Si 0.800 3.200 4 C 0.029 3.971 5 C -0.205 4.205 6 C -0.118 4.118 7 C -0.064 4.064 8 C 0.591 3.409 9 O -0.569 6.569 10 N -0.698 5.698 11 C 0.113 3.887 12 H 0.088 0.912 13 C -0.145 4.145 14 C -0.061 4.061 15 H 0.126 0.874 16 C -0.065 4.065 17 C -0.074 4.074 18 C -0.139 4.139 19 C 0.078 3.922 20 F -0.143 7.143 21 C -0.087 4.087 22 Cl -0.064 7.064 23 C -0.084 4.084 24 C -0.126 4.126 25 N -0.511 5.511 26 H 0.399 0.601 27 H 0.117 0.883 28 H -0.288 1.288 29 H -0.296 1.296 30 H 0.169 0.831 31 H 0.145 0.855 32 H 0.411 0.589 33 H 0.096 0.904 34 H 0.072 0.928 35 H 0.171 0.829 36 H 0.162 0.838 37 H 0.153 0.847 38 H 0.092 0.908 39 H 0.101 0.899 40 H 0.428 0.572 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.500 4.861 -5.082 7.464 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.361 6.361 2 C -0.162 4.162 3 Si 0.705 3.295 4 C -0.090 4.090 5 C -0.229 4.229 6 C -0.145 4.145 7 C -0.177 4.177 8 C 0.380 3.620 9 O -0.448 6.448 10 N -0.349 5.349 11 C 0.008 3.992 12 H 0.106 0.894 13 C -0.183 4.183 14 C -0.079 4.079 15 H 0.144 0.856 16 C -0.066 4.066 17 C -0.092 4.092 18 C -0.158 4.158 19 C 0.058 3.942 20 F -0.121 7.121 21 C -0.114 4.114 22 Cl -0.035 7.035 23 C -0.102 4.102 24 C -0.164 4.164 25 N -0.109 5.109 26 H 0.250 0.750 27 H 0.135 0.865 28 H -0.214 1.214 29 H -0.224 1.224 30 H 0.186 0.814 31 H 0.163 0.837 32 H 0.247 0.753 33 H 0.115 0.885 34 H 0.091 0.909 35 H 0.188 0.812 36 H 0.179 0.821 37 H 0.170 0.830 38 H 0.111 0.889 39 H 0.120 0.880 40 H 0.268 0.732 Dipole moment (debyes) X Y Z Total from point charges -1.618 4.720 -5.233 7.230 hybrid contribution -0.322 -1.660 -0.249 1.709 sum -1.940 3.060 -5.482 6.571 Atomic orbital electron populations 1.86477 1.16735 1.82130 1.50799 1.24976 0.85436 1.10946 0.94819 0.92996 0.77801 0.74075 0.84669 1.21333 1.03905 0.84288 0.99434 1.20953 1.06169 1.00869 0.94920 1.21498 1.01296 0.91109 1.00627 1.20268 1.10887 0.95365 0.91209 1.17224 0.77746 0.82942 0.84071 1.90855 1.46178 1.84958 1.22836 1.45391 1.56861 1.08067 1.24580 1.21891 0.98988 0.82111 0.96201 0.89393 1.23587 0.96593 1.00939 0.97186 1.21648 0.95041 0.92423 0.98779 0.85607 1.19876 0.96558 0.95988 0.94174 1.21410 0.93605 0.95407 0.98772 1.21455 1.02496 0.94171 0.97689 1.17841 0.94990 0.83348 0.98007 1.91516 1.80824 1.43924 1.95879 1.21195 1.00916 0.95146 0.94171 1.98403 1.92556 1.62742 1.49780 1.21013 0.99444 0.90422 0.99349 1.23415 0.94529 0.97669 1.00770 1.41872 1.42583 1.09678 1.16721 0.75031 0.86526 1.21444 1.22388 0.81393 0.83743 0.75278 0.88518 0.90898 0.81181 0.82065 0.82985 0.88921 0.88032 0.73204 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 3.46 12.88 -148.98 -1.92 1.54 16 2 C -0.05 0.33 3.08 71.23 0.22 0.55 16 3 Si 0.80 -4.99 30.56 68.60 2.10 -2.90 16 4 C 0.03 -0.12 6.46 41.34 0.27 0.14 16 5 C -0.21 0.46 9.32 22.01 0.21 0.67 16 6 C -0.12 -0.28 10.65 22.57 0.24 -0.04 16 7 C -0.06 -0.07 7.06 40.35 0.28 0.22 16 8 C 0.59 2.13 7.79 86.45 0.67 2.80 16 9 O -0.57 -7.25 16.48 -4.32 -0.07 -7.32 16 10 N -0.70 3.07 5.26 -444.01 -2.33 0.74 16 11 C 0.11 -0.47 4.32 45.52 0.20 -0.27 16 12 H 0.09 0.09 7.46 -2.39 -0.02 0.08 16 13 C -0.14 0.82 7.25 31.12 0.23 1.05 16 14 C -0.06 0.58 3.86 -11.02 -0.04 0.54 16 15 H 0.13 -1.72 8.09 -2.38 -0.02 -1.74 16 16 C -0.07 0.39 5.29 -19.86 -0.11 0.28 16 17 C -0.07 0.51 9.70 22.26 0.22 0.73 16 18 C -0.14 0.39 10.03 22.31 0.22 0.61 16 19 C 0.08 0.25 7.28 22.39 0.16 0.41 16 20 F -0.14 -1.05 16.84 44.97 0.76 -0.29 16 21 C -0.09 -0.24 6.33 22.36 0.14 -0.09 16 22 Cl -0.06 -0.33 28.62 -2.72 -0.08 -0.41 16 23 C -0.08 0.18 8.38 22.29 0.19 0.37 16 24 C -0.13 1.10 7.29 31.12 0.23 1.33 16 25 N -0.51 2.49 5.99 -171.93 -1.03 1.46 16 26 H 0.40 -5.27 8.70 -74.06 -0.64 -5.92 16 27 H 0.12 -0.77 7.96 -2.39 -0.02 -0.78 16 28 H -0.29 0.07 7.11 99.48 0.71 0.78 16 29 H -0.30 -0.32 7.11 99.48 0.71 0.39 16 30 H 0.17 -1.12 6.19 -2.91 -0.02 -1.13 16 31 H 0.14 0.48 8.06 -2.91 -0.02 0.45 16 32 H 0.41 -4.52 7.83 -92.71 -0.73 -5.25 16 33 H 0.10 -0.51 6.32 -2.39 -0.02 -0.52 16 34 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 35 H 0.17 -2.25 8.05 -2.91 -0.02 -2.27 16 36 H 0.16 -1.04 8.06 -2.91 -0.02 -1.06 16 37 H 0.15 -0.67 6.67 -2.91 -0.02 -0.69 16 38 H 0.09 -1.00 8.14 -2.39 -0.02 -1.01 16 39 H 0.10 -0.82 7.71 -2.39 -0.02 -0.84 16 40 H 0.43 -4.49 8.19 -92.71 -0.76 -5.25 16 Total: 0.00 -22.77 360.51 -0.21 -22.98 By element: Atomic # 1 Polarization: -24.13 SS G_CDS: -0.95 Total: -25.08 kcal Atomic # 6 Polarization: 5.95 SS G_CDS: 3.32 Total: 9.27 kcal Atomic # 7 Polarization: 5.57 SS G_CDS: -3.37 Total: 2.20 kcal Atomic # 8 Polarization: -3.79 SS G_CDS: -1.99 Total: -5.78 kcal Atomic # 9 Polarization: -1.05 SS G_CDS: 0.76 Total: -0.29 kcal Atomic # 14 Polarization: -4.99 SS G_CDS: 2.10 Total: -2.90 kcal Atomic # 17 Polarization: -0.33 SS G_CDS: -0.08 Total: -0.41 kcal Total: -22.77 -0.21 -22.98 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10156534_6580494.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.095 kcal (2) G-P(sol) polarization free energy of solvation -22.769 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.674 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.208 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.977 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.882 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds