Wall clock time and date at job start Sat Mar 6 2021 11:52:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.33817 * 122.44683 * 2 1 4 4 C 1.50703 * 124.52400 * 359.95562 * 3 2 1 5 5 O 1.42905 * 109.46828 * 113.45282 * 4 3 2 6 6 Si 1.86291 * 109.47207 * 233.45155 * 4 3 2 7 7 S 1.70621 * 110.95098 * 179.97438 * 3 2 1 8 8 C 1.75831 * 91.56257 * 0.02562 * 7 3 2 9 9 C 1.46580 * 125.45294 * 179.97438 * 8 7 3 10 10 O 1.21705 * 119.99830 * 180.02562 * 9 8 7 11 11 N 1.34775 * 120.00363 * 0.02684 * 9 8 7 12 12 C 1.46496 * 120.00153 * 179.97438 * 11 9 8 13 13 H 1.09003 * 112.91026 * 23.75137 * 12 11 9 14 14 C 1.53785 * 113.61836 * 154.99844 * 12 11 9 15 15 C 1.53786 * 87.17102 * 89.15844 * 14 12 11 16 16 H 1.08999 * 113.61608 * 270.76046 * 15 14 12 17 17 C 1.50694 * 113.60914 * 139.94302 * 15 14 12 18 18 C 1.38218 * 119.96851 * 120.00255 * 17 15 14 19 19 C 1.38318 * 120.01013 * 179.97438 * 18 17 15 20 20 Cl 1.73608 * 120.02339 * 179.97438 * 19 18 17 21 21 C 1.38547 * 119.95771 * 0.03048 * 19 18 17 22 22 F 1.35098 * 120.03444 * 179.97438 * 21 19 18 23 23 C 1.38454 * 119.93409 * 359.97438 * 21 19 18 24 24 C 1.38197 * 119.98660 * 359.71117 * 23 21 19 25 25 C 1.53778 * 87.07834 * 25.39422 * 15 14 12 26 26 C 1.36645 * 109.08443 * 0.24391 * 8 7 3 27 27 H 1.09003 * 109.47632 * 85.00783 * 1 2 3 28 28 H 1.08997 * 109.47456 * 205.00545 * 1 2 3 29 29 H 1.08998 * 109.47303 * 325.00817 * 1 2 3 30 30 H 1.08991 * 109.46949 * 353.45744 * 4 3 2 31 31 H 0.96701 * 114.00279 * 179.97438 * 5 4 3 32 32 H 1.48503 * 110.00513 * 300.00111 * 6 4 3 33 33 H 1.48505 * 109.99973 * 61.32564 * 6 4 3 34 34 H 0.97001 * 119.99715 * 359.97438 * 11 9 8 35 35 H 1.09000 * 113.60917 * 334.57090 * 14 12 11 36 36 H 1.08992 * 113.61732 * 203.75257 * 14 12 11 37 37 H 1.08002 * 119.99240 * 359.97438 * 18 17 15 38 38 H 1.07992 * 120.00372 * 180.02562 * 23 21 19 39 39 H 1.07996 * 119.97677 * 180.29634 * 24 23 21 40 40 H 1.08998 * 113.61575 * 89.11710 * 25 15 14 41 41 H 1.09007 * 113.61406 * 219.93205 * 25 15 14 42 42 H 1.08000 * 123.34989 * 179.75638 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2249 1.1293 0.0000 4 6 1.6354 2.5162 -0.0010 5 8 1.9418 3.1648 1.2350 6 14 2.3559 3.4963 -1.4119 7 16 3.8969 0.7892 0.0007 8 6 3.5936 -0.9427 0.0002 9 6 4.6231 -1.9862 0.0000 10 8 4.3001 -3.1596 -0.0008 11 7 5.9272 -1.6462 0.0006 12 6 6.9561 -2.6891 0.0009 13 1 6.6001 -3.6365 -0.4038 14 6 8.2981 -2.2308 -0.5939 15 6 8.6847 -1.7773 0.8239 16 1 8.3939 -0.7511 1.0486 17 6 10.1188 -2.0708 1.1814 18 6 10.9735 -1.0363 1.5126 19 6 12.2899 -1.3048 1.8414 20 17 13.3639 -0.0055 2.2568 21 6 12.7512 -2.6112 1.8380 22 9 14.0368 -2.8752 2.1585 23 6 11.8934 -3.6460 1.5059 24 6 10.5769 -3.3754 1.1841 25 6 7.6919 -2.8292 1.3460 26 6 2.2446 -1.1601 -0.0059 27 1 -0.3634 0.0894 -1.0238 28 1 -0.3634 -0.9313 0.4344 29 1 -0.3634 0.8419 0.5893 30 1 0.5538 2.4511 -0.1187 31 1 1.5929 4.0640 1.3044 32 1 3.8304 3.5923 -1.2629 33 1 2.0171 2.8493 -2.7049 34 1 6.1846 -0.7110 0.0009 35 1 8.2031 -1.4095 -1.3042 36 1 8.9102 -3.0493 -0.9726 37 1 10.6133 -0.0181 1.5145 38 1 12.2517 -4.6647 1.5033 39 1 9.9067 -4.1832 0.9297 40 1 8.1373 -3.8123 1.4982 41 1 7.1084 -2.4917 2.2026 42 1 1.8019 -2.1451 -0.0113 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10156534_6739946.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:52:18 Heat of formation + Delta-G solvation = -30.702131 kcal Electronic energy + Delta-G solvation = -28666.763531 eV Core-core repulsion = 24260.233672 eV Total energy + Delta-G solvation = -4406.529859 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.059 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -50.07503 -41.75138 -40.66499 -39.76316 -38.84639 -37.59880 -37.47498 -34.76187 -32.65595 -32.16960 -31.35345 -29.98251 -27.30450 -26.75988 -25.82663 -24.45300 -24.19426 -22.83833 -22.10005 -20.49573 -19.91850 -19.39174 -18.95250 -18.43542 -17.79487 -17.49738 -17.42975 -16.88701 -16.83453 -16.36301 -16.17196 -15.84499 -15.80523 -15.37110 -15.07773 -14.85516 -14.76186 -14.49001 -14.39679 -14.33949 -14.28169 -13.83931 -13.64345 -13.47634 -13.34868 -13.16102 -13.03981 -12.66489 -12.63918 -12.54551 -12.41256 -12.31120 -11.90786 -11.87572 -11.71899 -11.40940 -11.33839 -10.60956 -10.31782 -10.08317 -9.85572 -9.62938 -9.55568 -5.11173 -0.81092 -0.17594 -0.01266 0.20425 0.62094 0.90184 1.01071 1.25607 1.58638 1.84629 1.90511 1.92919 2.28422 2.99919 3.22872 3.34669 3.45887 3.52834 3.63498 3.64736 3.81825 3.85504 3.98383 4.00381 4.04346 4.13001 4.15754 4.34975 4.45282 4.48635 4.53997 4.65202 4.72022 4.75367 4.77789 4.79705 4.81856 4.86934 4.91710 4.96904 5.05320 5.06177 5.19831 5.29256 5.30986 5.50439 5.61239 6.20170 6.83257 6.89121 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.100 4.100 2 C -0.107 4.107 3 C -0.203 4.203 4 C -0.046 4.046 5 O -0.560 6.560 6 Si 0.758 3.242 7 S 0.221 5.779 8 C -0.284 4.284 9 C 0.594 3.406 10 O -0.563 6.563 11 N -0.699 5.699 12 C 0.110 3.890 13 H 0.097 0.903 14 C -0.124 4.124 15 C -0.067 4.067 16 H 0.112 0.888 17 C -0.063 4.063 18 C -0.082 4.082 19 C -0.086 4.086 20 Cl -0.062 7.062 21 C 0.079 3.921 22 F -0.142 7.142 23 C -0.137 4.137 24 C -0.078 4.078 25 C -0.141 4.141 26 C -0.055 4.055 27 H 0.085 0.915 28 H 0.077 0.923 29 H 0.083 0.917 30 H 0.110 0.890 31 H 0.408 0.592 32 H -0.275 1.275 33 H -0.289 1.289 34 H 0.408 0.592 35 H 0.086 0.914 36 H 0.114 0.886 37 H 0.156 0.844 38 H 0.162 0.838 39 H 0.166 0.834 40 H 0.111 0.889 41 H 0.068 0.932 42 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.380 5.414 -2.132 7.925 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.158 4.158 2 C -0.120 4.120 3 C -0.323 4.323 4 C -0.157 4.157 5 O -0.371 6.371 6 Si 0.661 3.339 7 S 0.491 5.509 8 C -0.404 4.404 9 C 0.382 3.618 10 O -0.444 6.444 11 N -0.350 5.350 12 C 0.006 3.994 13 H 0.115 0.885 14 C -0.162 4.162 15 C -0.085 4.085 16 H 0.130 0.870 17 C -0.064 4.064 18 C -0.100 4.100 19 C -0.114 4.114 20 Cl -0.033 7.033 21 C 0.059 3.941 22 F -0.121 7.121 23 C -0.156 4.156 24 C -0.096 4.096 25 C -0.179 4.179 26 C -0.088 4.088 27 H 0.103 0.897 28 H 0.096 0.904 29 H 0.102 0.898 30 H 0.128 0.872 31 H 0.261 0.739 32 H -0.201 1.201 33 H -0.215 1.215 34 H 0.245 0.755 35 H 0.105 0.895 36 H 0.132 0.868 37 H 0.173 0.827 38 H 0.180 0.820 39 H 0.183 0.817 40 H 0.129 0.871 41 H 0.087 0.913 42 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges -3.249 5.053 -2.639 6.562 hybrid contribution -0.593 -0.951 0.494 1.225 sum -3.841 4.102 -2.145 6.015 Atomic orbital electron populations 1.20686 0.87166 1.04290 1.03662 1.18957 0.99582 0.90235 1.03253 1.23671 0.98571 0.99720 1.10314 1.24291 1.04257 0.90421 0.96755 1.86462 1.80709 1.34632 1.35309 0.94504 0.79542 0.86389 0.73417 1.82891 1.04200 0.96542 1.67253 1.24639 0.98199 0.97893 1.19681 1.17056 0.82399 0.86953 0.75432 1.90828 1.82238 1.19597 1.51692 1.45482 1.04408 1.10634 1.74433 1.22034 0.87277 0.91808 0.98325 0.88495 1.23440 0.93970 1.03018 0.95767 1.21623 0.89077 1.00828 0.97021 0.87033 1.19827 0.95699 0.92537 0.98324 1.21088 0.89662 1.01653 0.97621 1.21207 0.93913 0.88024 1.08223 1.98401 1.64749 1.48146 1.92033 1.17820 0.79899 0.92954 1.03400 1.91516 1.35528 1.94620 1.90393 1.21420 0.93826 0.99287 1.01033 1.21315 0.94425 0.97385 0.96496 1.23639 0.96719 1.00560 0.96981 1.20861 0.91159 1.00498 0.96302 0.89673 0.90414 0.89826 0.87222 0.73935 1.20104 1.21550 0.75526 0.89527 0.86764 0.82658 0.82031 0.81667 0.87090 0.91307 0.82602 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.30 9.48 71.24 0.68 0.97 16 2 C -0.11 -0.26 5.78 -21.05 -0.12 -0.39 16 3 C -0.20 -0.45 4.86 24.68 0.12 -0.33 16 4 C -0.05 0.17 2.76 71.24 0.20 0.36 16 5 O -0.56 2.10 12.86 -148.98 -1.92 0.19 16 6 Si 0.76 -3.50 32.13 68.60 2.20 -1.30 16 7 S 0.22 0.49 20.83 -56.49 -1.18 -0.68 16 8 C -0.28 -1.59 6.45 24.07 0.16 -1.43 16 9 C 0.59 4.25 7.78 86.42 0.67 4.92 16 10 O -0.56 -8.06 16.44 -4.36 -0.07 -8.13 16 11 N -0.70 -0.11 5.26 -443.81 -2.33 -2.44 16 12 C 0.11 -0.27 4.33 45.58 0.20 -0.07 16 13 H 0.10 0.10 7.46 -2.39 -0.02 0.08 16 14 C -0.12 0.90 7.29 31.12 0.23 1.12 16 15 C -0.07 0.46 3.86 -11.01 -0.04 0.42 16 16 H 0.11 -0.93 8.09 -2.39 -0.02 -0.95 16 17 C -0.06 0.27 5.29 -19.86 -0.11 0.17 16 18 C -0.08 0.12 9.49 22.28 0.21 0.33 16 19 C -0.09 -0.28 6.33 22.36 0.14 -0.14 16 20 Cl -0.06 -0.32 28.62 -2.72 -0.08 -0.40 16 21 C 0.08 0.31 7.28 22.40 0.16 0.47 16 22 F -0.14 -1.11 16.84 44.97 0.76 -0.35 16 23 C -0.14 0.22 10.03 22.31 0.22 0.44 16 24 C -0.08 0.39 8.62 22.27 0.19 0.58 16 25 C -0.14 0.67 7.26 31.18 0.23 0.89 16 26 C -0.05 -0.29 9.78 21.72 0.21 -0.07 16 27 H 0.08 -0.43 8.14 -2.39 -0.02 -0.45 16 28 H 0.08 -0.28 8.11 -2.39 -0.02 -0.30 16 29 H 0.08 -0.42 6.99 -2.39 -0.02 -0.44 16 30 H 0.11 -0.88 6.24 -2.39 -0.01 -0.89 16 31 H 0.41 -5.86 8.74 -74.06 -0.65 -6.51 16 32 H -0.27 -0.28 7.11 99.48 0.71 0.42 16 33 H -0.29 -0.59 7.11 99.48 0.71 0.12 16 34 H 0.41 -1.61 7.82 -92.71 -0.72 -2.33 16 35 H 0.09 -0.68 8.14 -2.39 -0.02 -0.70 16 36 H 0.11 -1.03 7.73 -2.39 -0.02 -1.05 16 37 H 0.16 -0.72 8.05 -2.91 -0.02 -0.75 16 38 H 0.16 -0.85 8.06 -2.91 -0.02 -0.87 16 39 H 0.17 -1.66 6.64 -2.91 -0.02 -1.68 16 40 H 0.11 -0.79 6.29 -2.39 -0.02 -0.80 16 41 H 0.07 -0.14 8.14 -2.38 -0.02 -0.16 16 42 H 0.16 0.74 8.06 -2.91 -0.02 0.72 16 Total: 0.00 -21.90 386.56 0.50 -21.40 By element: Atomic # 1 Polarization: -16.30 SS G_CDS: -0.23 Total: -16.53 kcal Atomic # 6 Polarization: 4.91 SS G_CDS: 3.34 Total: 8.25 kcal Atomic # 7 Polarization: -0.11 SS G_CDS: -2.33 Total: -2.44 kcal Atomic # 8 Polarization: -5.96 SS G_CDS: -1.99 Total: -7.94 kcal Atomic # 9 Polarization: -1.11 SS G_CDS: 0.76 Total: -0.35 kcal Atomic # 14 Polarization: -3.50 SS G_CDS: 2.20 Total: -1.30 kcal Atomic # 16 Polarization: 0.49 SS G_CDS: -1.18 Total: -0.68 kcal Atomic # 17 Polarization: -0.32 SS G_CDS: -0.08 Total: -0.40 kcal Total: -21.90 0.50 -21.40 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10156534_6739946.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.302 kcal (2) G-P(sol) polarization free energy of solvation -21.902 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -31.204 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.502 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.400 kcal (6) G-S(sol) free energy of system = (1) + (5) -30.702 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds