Wall clock time and date at job start Sat Mar 6 2021 11:10:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86298 * 109.47294 * 2 1 4 4 C 1.50702 * 109.47184 * 120.00040 * 2 1 3 5 5 C 1.35454 * 126.06474 * 245.04282 * 4 2 1 6 6 N 1.35536 * 108.87062 * 179.69223 * 5 4 2 7 7 C 1.37649 * 108.64394 * 0.44133 * 6 5 4 8 8 C 1.46680 * 126.23602 * 179.83198 * 7 6 5 9 9 O 1.21693 * 119.99780 * 179.68909 * 8 7 6 10 10 N 1.34776 * 119.99613 * 359.68351 * 8 7 6 11 11 C 1.46505 * 119.99597 * 180.02562 * 10 8 7 12 12 H 1.09000 * 112.85296 * 23.80222 * 11 10 8 13 13 C 1.53781 * 113.61334 * 154.99978 * 11 10 8 14 14 C 1.53786 * 87.17350 * 89.07333 * 13 11 10 15 15 H 1.09000 * 113.60973 * 270.92699 * 14 13 11 16 16 C 1.50690 * 113.61518 * 140.02616 * 14 13 11 17 17 C 1.38248 * 119.99055 * 299.71980 * 16 14 13 18 18 C 1.38211 * 120.01215 * 179.76798 * 17 16 14 19 19 C 1.38329 * 119.99012 * 0.51371 * 18 17 16 20 20 Br 1.89101 * 120.01037 * 179.76836 * 19 18 17 21 21 C 1.38329 * 119.97866 * 359.73951 * 19 18 17 22 22 C 1.38217 * 119.98807 * 0.02562 * 21 19 18 23 23 C 1.53781 * 113.61146 * 252.49455 * 11 10 8 24 24 C 1.37871 * 107.53239 * 359.56338 * 7 6 5 25 25 H 0.96703 * 113.99972 * 299.99880 * 1 2 3 26 26 H 1.09004 * 109.47265 * 239.99615 * 2 1 3 27 27 H 1.48501 * 110.00193 * 178.67991 * 3 2 1 28 28 H 1.48505 * 109.99861 * 299.99869 * 3 2 1 29 29 H 1.07999 * 125.56893 * 359.97438 * 5 4 2 30 30 H 0.97003 * 125.68218 * 180.29784 * 6 5 4 31 31 H 0.96995 * 120.00232 * 359.97438 * 10 8 7 32 32 H 1.09002 * 113.61445 * 203.66333 * 13 11 10 33 33 H 1.09002 * 113.61408 * 334.48063 * 13 11 10 34 34 H 1.08000 * 119.98931 * 0.02562 * 17 16 14 35 35 H 1.08004 * 120.00594 * 180.23568 * 18 17 16 36 36 H 1.07999 * 120.00108 * 180.02562 * 21 19 18 37 37 H 1.08002 * 119.99071 * 180.02562 * 22 21 19 38 38 H 1.09005 * 113.61471 * 25.43638 * 23 11 10 39 39 H 1.08996 * 113.61178 * 156.24980 * 23 11 10 40 40 H 1.08001 * 126.45692 * 180.30121 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6327 -0.1496 2.2445 6 7 2.8991 -1.1013 3.1721 7 6 2.3680 -2.2961 2.7418 8 6 2.4359 -3.5796 3.4485 9 8 1.9193 -4.5691 2.9637 10 7 3.0704 -3.6631 4.6346 11 6 3.1386 -4.9452 5.3402 12 1 3.0300 -5.8012 4.6742 13 6 4.3363 -5.0582 6.2982 14 6 3.4299 -4.4496 7.3813 15 1 3.4587 -3.3605 7.4133 16 6 3.6035 -5.0811 8.7384 17 6 3.3555 -6.4303 8.9097 18 6 3.5192 -7.0110 10.1532 19 6 3.9211 -6.2397 11.2289 20 35 4.1389 -7.0323 12.9319 21 6 4.1641 -4.8887 11.0583 22 6 4.0048 -4.3099 9.8133 23 6 2.2375 -5.0122 6.5845 24 6 1.7555 -2.0653 1.5284 25 1 -0.3933 0.4417 0.7651 26 1 1.7924 -0.5139 -0.8900 27 1 3.5346 1.7703 0.0321 28 1 1.5615 2.4678 -1.2086 29 1 2.9274 0.8876 2.3063 30 1 3.3850 -0.9638 4.0004 31 1 3.4825 -2.8745 5.0207 32 1 4.6344 -6.0860 6.5052 33 1 5.1768 -4.4208 6.0234 34 1 3.0377 -7.0315 8.0706 35 1 3.3290 -8.0658 10.2860 36 1 4.4783 -4.2863 11.8978 37 1 4.1950 -3.2552 9.6799 38 1 1.3831 -4.3367 6.5418 39 1 1.9607 -6.0274 6.8689 40 1 1.2369 -2.7935 0.9225 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_10543058.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:10:39 Heat of formation + Delta-G solvation = 36.519828 kcal Electronic energy + Delta-G solvation = -24499.674841 eV Core-core repulsion = 20714.681313 eV Total energy + Delta-G solvation = -3784.993528 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 377.041 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -42.50350 -41.45343 -40.16505 -38.78229 -37.62687 -34.87928 -33.15434 -32.42922 -32.04281 -30.85021 -30.18272 -26.78419 -26.72744 -25.84934 -24.31809 -23.72467 -22.39752 -21.30720 -20.80973 -20.34099 -19.81281 -18.08579 -17.48399 -17.18776 -16.80738 -16.49047 -16.41258 -16.12905 -15.87998 -15.60824 -15.21224 -15.06798 -14.76290 -14.55300 -14.44677 -14.38492 -14.26543 -13.92624 -13.51670 -13.46835 -13.45643 -12.92315 -12.42303 -12.26038 -12.08432 -11.96718 -11.89489 -11.43684 -11.35933 -11.29106 -11.24314 -10.32453 -10.27482 -10.01609 -9.94747 -9.52165 -9.28151 -4.92613 0.04482 0.31658 0.35317 0.65192 1.42707 1.53191 1.74681 1.89630 2.10616 2.14260 2.23750 2.55477 3.41123 3.62758 3.64881 3.70197 3.79841 3.82055 3.93374 3.94625 3.99426 4.17456 4.18981 4.35130 4.37363 4.40563 4.59526 4.66472 4.70086 4.75634 4.79703 4.86251 4.91256 4.98999 5.02125 5.04499 5.09857 5.22983 5.23273 5.43669 5.58854 5.62005 5.73306 5.83326 6.34908 6.53404 6.91913 7.04965 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.566 6.566 2 C -0.053 4.053 3 Si 0.804 3.196 4 C -0.230 4.230 5 C 0.063 3.937 6 N -0.514 5.514 7 C -0.069 4.069 8 C 0.591 3.409 9 O -0.576 6.576 10 N -0.696 5.696 11 C 0.113 3.887 12 H 0.085 0.915 13 C -0.123 4.123 14 C -0.064 4.064 15 H 0.120 0.880 16 C -0.057 4.057 17 C -0.116 4.116 18 C -0.100 4.100 19 C -0.110 4.110 20 Br -0.064 7.064 21 C -0.099 4.099 22 C -0.111 4.111 23 C -0.143 4.143 24 C -0.106 4.106 25 H 0.393 0.607 26 H 0.090 0.910 27 H -0.274 1.274 28 H -0.311 1.311 29 H 0.218 0.782 30 H 0.438 0.562 31 H 0.413 0.587 32 H 0.101 0.899 33 H 0.091 0.909 34 H 0.145 0.855 35 H 0.136 0.864 36 H 0.139 0.861 37 H 0.154 0.846 38 H 0.069 0.931 39 H 0.097 0.903 40 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.639 7.603 4.634 9.619 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.374 6.374 2 C -0.162 4.162 3 Si 0.709 3.291 4 C -0.236 4.236 5 C -0.075 4.075 6 N -0.111 5.111 7 C -0.182 4.182 8 C 0.380 3.620 9 O -0.455 6.455 10 N -0.347 5.347 11 C 0.008 3.992 12 H 0.103 0.897 13 C -0.161 4.161 14 C -0.082 4.082 15 H 0.138 0.862 16 C -0.057 4.057 17 C -0.134 4.134 18 C -0.120 4.120 19 C -0.189 4.189 20 Br 0.021 6.979 21 C -0.119 4.119 22 C -0.129 4.129 23 C -0.182 4.182 24 C -0.133 4.133 25 H 0.243 0.757 26 H 0.107 0.893 27 H -0.200 1.200 28 H -0.240 1.240 29 H 0.235 0.765 30 H 0.280 0.720 31 H 0.250 0.750 32 H 0.119 0.881 33 H 0.110 0.890 34 H 0.162 0.838 35 H 0.154 0.846 36 H 0.157 0.843 37 H 0.172 0.828 38 H 0.088 0.912 39 H 0.116 0.884 40 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges 4.019 6.813 4.180 8.946 hybrid contribution 0.120 -0.690 -0.201 0.729 sum 4.139 6.122 3.979 8.393 Atomic orbital electron populations 1.86460 1.18260 1.82399 1.50308 1.24749 0.84484 1.11263 0.95749 0.93952 0.77205 0.73063 0.84916 1.19953 1.09079 0.94367 1.00184 1.22399 1.00370 0.95935 0.88818 1.41842 1.43129 1.06294 1.19841 1.20067 1.11972 0.86739 0.99465 1.17247 0.77644 0.86505 0.80622 1.90855 1.48521 1.37967 1.68169 1.45343 1.56591 1.12541 1.20200 1.21890 0.98132 0.86299 0.92904 0.89676 1.23378 0.96270 1.03377 0.93095 1.21690 0.96536 1.00837 0.89153 0.86171 1.20002 0.96697 0.93506 0.95516 1.21251 0.99945 0.95254 0.96968 1.21291 0.98223 1.00447 0.92036 1.21991 1.08525 0.96499 0.91923 1.96758 1.96622 1.82596 1.21906 1.21343 0.98682 0.92732 0.99138 1.21360 0.99076 1.01298 0.91182 1.23615 0.97087 1.02825 0.94628 1.21227 1.00358 0.96661 0.95073 0.75685 0.89269 1.20043 1.23982 0.76532 0.72034 0.75016 0.88081 0.89033 0.83768 0.84633 0.84275 0.82806 0.91202 0.88431 0.86088 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -1.38 12.88 -148.98 -1.92 -3.30 16 2 C -0.05 -0.01 3.02 71.24 0.22 0.21 16 3 Si 0.80 -4.17 30.60 68.60 2.10 -2.07 16 4 C -0.23 0.09 5.43 -20.12 -0.11 -0.02 16 5 C 0.06 -0.50 10.45 83.48 0.87 0.37 16 6 N -0.51 4.31 5.99 -183.62 -1.10 3.21 16 7 C -0.07 -0.09 7.06 40.35 0.28 0.19 16 8 C 0.59 2.57 7.79 86.45 0.67 3.24 16 9 O -0.58 -8.45 16.48 -4.32 -0.07 -8.53 16 10 N -0.70 3.13 5.26 -443.99 -2.33 0.79 16 11 C 0.11 -0.41 4.32 45.52 0.20 -0.22 16 12 H 0.09 0.16 7.46 -2.39 -0.02 0.14 16 13 C -0.12 1.02 7.28 31.12 0.23 1.25 16 14 C -0.06 0.55 3.87 -10.92 -0.04 0.51 16 15 H 0.12 -1.51 8.10 -2.39 -0.02 -1.53 16 16 C -0.06 0.27 5.29 -19.86 -0.11 0.17 16 17 C -0.12 0.34 8.63 22.27 0.19 0.54 16 18 C -0.10 0.01 9.79 22.28 0.22 0.23 16 19 C -0.11 -0.16 6.22 22.31 0.14 -0.02 16 20 Br -0.06 -0.18 33.70 -20.37 -0.69 -0.87 16 21 C -0.10 0.12 9.79 22.29 0.22 0.34 16 22 C -0.11 0.51 9.71 22.27 0.22 0.72 16 23 C -0.14 0.73 7.26 31.21 0.23 0.95 16 24 C -0.11 -0.61 10.59 22.57 0.24 -0.37 16 25 H 0.39 -2.57 8.70 -74.06 -0.64 -3.22 16 26 H 0.09 0.31 7.96 -2.39 -0.02 0.29 16 27 H -0.27 0.62 7.11 99.48 0.71 1.33 16 28 H -0.31 -1.29 7.11 99.48 0.71 -0.58 16 29 H 0.22 -3.58 6.21 -2.91 -0.02 -3.60 16 30 H 0.44 -7.30 8.19 -92.71 -0.76 -8.06 16 31 H 0.41 -5.06 7.83 -92.71 -0.73 -5.79 16 32 H 0.10 -0.77 7.73 -2.39 -0.02 -0.79 16 33 H 0.09 -0.95 8.14 -2.39 -0.02 -0.97 16 34 H 0.14 -0.86 6.65 -2.91 -0.02 -0.88 16 35 H 0.14 -0.20 8.06 -2.91 -0.02 -0.23 16 36 H 0.14 -0.45 8.06 -2.91 -0.02 -0.47 16 37 H 0.15 -1.51 8.06 -2.91 -0.02 -1.53 16 38 H 0.07 -0.22 8.14 -2.38 -0.02 -0.24 16 39 H 0.10 -0.48 6.31 -2.39 -0.02 -0.49 16 40 H 0.12 1.27 8.06 -2.91 -0.02 1.25 16 Total: 0.00 -26.72 359.28 -1.33 -28.05 By element: Atomic # 1 Polarization: -24.40 SS G_CDS: -0.98 Total: -25.37 kcal Atomic # 6 Polarization: 4.44 SS G_CDS: 3.66 Total: 8.10 kcal Atomic # 7 Polarization: 7.43 SS G_CDS: -3.44 Total: 4.00 kcal Atomic # 8 Polarization: -9.84 SS G_CDS: -1.99 Total: -11.83 kcal Atomic # 14 Polarization: -4.17 SS G_CDS: 2.10 Total: -2.07 kcal Atomic # 35 Polarization: -0.18 SS G_CDS: -0.69 Total: -0.87 kcal Total: -26.72 -1.33 -28.05 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_10543058.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 64.565 kcal (2) G-P(sol) polarization free energy of solvation -26.719 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 37.847 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.327 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.045 kcal (6) G-S(sol) free energy of system = (1) + (5) 36.520 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds