Wall clock time and date at job start Sat Mar 6 2021 11:10:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 C 1.35538 * 125.67264 * 2 1 4 4 C 1.35450 * 108.86822 * 179.73121 * 3 2 1 5 5 C 1.50707 * 126.06475 * 179.97438 * 4 3 2 6 6 O 1.42901 * 109.46800 * 120.02461 * 5 4 3 7 7 Si 1.86300 * 109.47122 * 0.03045 * 5 4 3 8 8 C 1.39831 * 107.86697 * 0.02562 * 4 3 2 9 9 C 1.37648 * 125.68097 * 179.68654 * 2 1 3 10 10 C 1.46670 * 126.23473 * 0.26631 * 9 2 1 11 11 O 1.21704 * 120.00089 * 5.71275 * 10 9 2 12 12 N 1.34772 * 120.00525 * 185.70757 * 10 9 2 13 13 C 1.46501 * 120.00605 * 185.11880 * 12 10 9 14 14 H 1.08999 * 112.84739 * 336.19688 * 13 12 10 15 15 C 1.53784 * 113.61589 * 107.50191 * 13 12 10 16 16 C 1.53781 * 87.07751 * 89.11893 * 15 13 12 17 17 H 1.09003 * 113.61282 * 270.88297 * 16 15 13 18 18 C 1.50700 * 113.69054 * 139.99595 * 16 15 13 19 19 C 1.38240 * 119.98775 * 322.18376 * 18 16 15 20 20 C 1.38224 * 120.01058 * 179.76867 * 19 18 16 21 21 C 1.38321 * 119.98750 * 0.50843 * 20 19 18 22 22 Br 1.89097 * 120.01171 * 179.76624 * 21 20 19 23 23 C 1.38323 * 119.98061 * 359.74773 * 21 20 19 24 24 C 1.38226 * 119.99131 * 0.02562 * 23 21 20 25 25 C 1.53780 * 113.61628 * 205.00404 * 13 12 10 26 26 H 1.09007 * 109.46561 * 86.05338 * 1 2 3 27 27 H 1.09006 * 109.46716 * 206.04508 * 1 2 3 28 28 H 1.08994 * 109.47781 * 326.05034 * 1 2 3 29 29 H 1.08002 * 125.56526 * 359.75272 * 3 2 1 30 30 H 1.08995 * 109.47094 * 240.02766 * 5 4 3 31 31 H 0.96700 * 114.00251 * 300.00178 * 6 5 4 32 32 H 1.48503 * 109.99993 * 179.97438 * 7 5 4 33 33 H 1.48503 * 109.99641 * 301.31440 * 7 5 4 34 34 H 1.08004 * 126.45477 * 180.02562 * 8 4 3 35 35 H 0.97004 * 119.99395 * 5.12006 * 12 10 9 36 36 H 1.08993 * 113.61566 * 203.66876 * 15 13 12 37 37 H 1.08996 * 113.61137 * 334.57566 * 15 13 12 38 38 H 1.08003 * 119.99678 * 0.02562 * 19 18 16 39 39 H 1.07996 * 120.00528 * 180.23779 * 20 19 18 40 40 H 1.08001 * 120.00426 * 180.02562 * 23 21 20 41 41 H 1.07999 * 119.99117 * 180.02562 * 24 23 21 42 42 H 1.09002 * 113.61257 * 25.42816 * 25 13 12 43 43 H 1.09001 * 113.61255 * 156.25365 * 25 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2554 1.1011 0.0000 4 6 3.5521 0.7095 0.0060 5 6 4.7536 1.6192 0.0076 6 8 5.5360 1.3729 1.1777 7 14 4.1885 3.3944 0.0008 8 6 3.5780 -0.6886 0.0093 9 6 2.2679 -1.1181 0.0061 10 6 1.8126 -2.5123 0.0082 11 8 0.6272 -2.7655 -0.1004 12 7 2.7069 -3.5131 0.1305 13 6 2.2671 -4.9062 0.0203 14 1 1.2099 -5.0358 0.2520 15 6 2.7008 -5.5875 -1.2884 16 6 3.9897 -5.9966 -0.5562 17 1 4.7880 -5.2582 -0.6318 18 6 4.4525 -7.3938 -0.8797 19 6 3.5266 -8.4059 -1.0515 20 6 3.9503 -9.6866 -1.3530 21 6 5.3014 -9.9577 -1.4724 22 35 5.8821 -11.7109 -1.8783 23 6 6.2277 -8.9458 -1.2952 24 6 5.8029 -7.6644 -0.9984 25 6 3.1843 -5.9014 0.7504 26 1 -0.3633 0.0707 -1.0253 27 1 -0.3633 -0.9234 0.4513 28 1 -0.3634 0.8524 0.5739 29 1 1.9081 2.1237 -0.0038 30 1 5.3564 1.4264 -0.8798 31 1 5.0621 1.5247 2.0069 32 1 5.3641 4.3017 0.0029 33 1 3.3473 3.6550 -1.1950 34 1 4.4585 -1.3141 0.0146 35 1 3.6419 -3.3110 0.2914 36 1 2.0719 -6.4319 -1.5703 37 1 2.8676 -4.8900 -2.1092 38 1 2.4718 -8.1951 -0.9542 39 1 3.2267 -10.4764 -1.4910 40 1 7.2827 -9.1569 -1.3888 41 1 6.5261 -6.8742 -0.8604 42 1 3.7414 -5.4574 1.5754 43 1 2.6872 -6.8312 1.0271 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_10803934.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:10:44 Heat of formation + Delta-G solvation = 45.346809 kcal Electronic energy + Delta-G solvation = -26767.365687 eV Core-core repulsion = 22827.217307 eV Total energy + Delta-G solvation = -3940.148381 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.057 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -42.57332 -41.46081 -40.13171 -38.76024 -37.63336 -34.98851 -33.79651 -33.04885 -32.04635 -31.02205 -30.12176 -28.30131 -26.71774 -26.16608 -25.58277 -24.17156 -23.63871 -22.36492 -21.27413 -20.65387 -20.00701 -18.85379 -18.10931 -17.61316 -17.06183 -16.75923 -16.63416 -16.44909 -16.13093 -15.90237 -15.54426 -15.46381 -15.10995 -15.05096 -14.64402 -14.53121 -14.40894 -14.28179 -14.08583 -13.51077 -13.46765 -13.44667 -13.22723 -13.13254 -12.91264 -12.41402 -12.26069 -12.06811 -11.92007 -11.86834 -11.42712 -11.29177 -11.24604 -11.16673 -10.31598 -10.19175 -10.01336 -9.68554 -9.51879 -9.25742 -4.93553 0.04833 0.31637 0.39160 0.64895 1.41089 1.54224 1.57550 1.73414 2.05490 2.24688 2.30509 2.55871 3.43127 3.60718 3.63986 3.69301 3.75259 3.82389 3.84750 3.94664 3.95259 4.04323 4.18917 4.24773 4.35346 4.36717 4.40679 4.42408 4.61283 4.67787 4.70267 4.72588 4.76630 4.78125 4.84032 4.88750 5.00925 5.03813 5.12179 5.19987 5.23000 5.23796 5.47129 5.62012 5.68775 5.83258 5.89086 6.16533 6.43944 6.92261 7.09606 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.061 3.939 2 N -0.412 5.412 3 C 0.034 3.966 4 C -0.219 4.219 5 C -0.035 4.035 6 O -0.559 6.559 7 Si 0.777 3.223 8 C -0.110 4.110 9 C -0.079 4.079 10 C 0.590 3.410 11 O -0.582 6.582 12 N -0.690 5.690 13 C 0.118 3.882 14 H 0.091 0.909 15 C -0.142 4.142 16 C -0.068 4.068 17 H 0.114 0.886 18 C -0.056 4.056 19 C -0.114 4.114 20 C -0.099 4.099 21 C -0.110 4.110 22 Br -0.063 7.063 23 C -0.099 4.099 24 C -0.113 4.113 25 C -0.124 4.124 26 H 0.079 0.921 27 H 0.086 0.914 28 H 0.115 0.885 29 H 0.199 0.801 30 H 0.101 0.899 31 H 0.393 0.607 32 H -0.305 1.305 33 H -0.284 1.284 34 H 0.157 0.843 35 H 0.415 0.585 36 H 0.101 0.899 37 H 0.067 0.933 38 H 0.148 0.852 39 H 0.138 0.862 40 H 0.138 0.862 41 H 0.150 0.850 42 H 0.088 0.912 43 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.988 3.690 3.289 5.041 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 N -0.084 5.084 3 C -0.103 4.103 4 C -0.225 4.225 5 C -0.146 4.146 6 O -0.367 6.367 7 Si 0.683 3.317 8 C -0.137 4.137 9 C -0.192 4.192 10 C 0.379 3.621 11 O -0.464 6.464 12 N -0.341 5.341 13 C 0.012 3.988 14 H 0.109 0.891 15 C -0.181 4.181 16 C -0.086 4.086 17 H 0.132 0.868 18 C -0.056 4.056 19 C -0.133 4.133 20 C -0.118 4.118 21 C -0.189 4.189 22 Br 0.022 6.978 23 C -0.119 4.119 24 C -0.132 4.132 25 C -0.161 4.161 26 H 0.098 0.902 27 H 0.105 0.895 28 H 0.133 0.867 29 H 0.216 0.784 30 H 0.118 0.882 31 H 0.243 0.757 32 H -0.233 1.233 33 H -0.211 1.211 34 H 0.175 0.825 35 H 0.253 0.747 36 H 0.119 0.881 37 H 0.086 0.914 38 H 0.165 0.835 39 H 0.156 0.844 40 H 0.156 0.844 41 H 0.168 0.832 42 H 0.107 0.893 43 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges -1.567 3.395 2.189 4.333 hybrid contribution 0.519 -0.323 -0.517 0.801 sum -1.048 3.073 1.672 3.651 Atomic orbital electron populations 1.22442 0.74884 1.06091 1.04542 1.44030 1.07628 1.04823 1.51932 1.22319 0.89813 0.92494 1.05708 1.19900 0.94148 0.94817 1.13676 1.24423 0.91669 1.08036 0.90454 1.86439 1.41542 1.92321 1.16354 0.93988 0.79651 0.72326 0.85704 1.21399 0.94236 0.95166 1.02861 1.20051 0.90963 0.87524 1.20656 1.17169 0.85231 0.84251 0.75401 1.90781 1.17696 1.85303 1.52644 1.45213 1.11772 1.04676 1.72390 1.21875 0.99750 0.79721 0.97438 0.89098 1.23575 0.96806 1.00787 0.96898 1.21646 0.97259 0.92859 0.96814 0.86827 1.20004 0.93193 0.95573 0.96872 1.21252 1.00947 0.91557 0.99509 1.21302 0.93760 0.98283 0.98499 1.21980 0.96492 0.91672 1.08801 1.96752 1.90335 1.17249 1.93458 1.21325 0.99784 0.92434 0.98351 1.21352 0.96066 0.96437 0.99350 1.23382 0.96840 0.99364 0.96554 0.90241 0.89493 0.86681 0.78393 0.88177 0.75694 1.23314 1.21070 0.82519 0.74711 0.88084 0.91450 0.83486 0.84410 0.84382 0.83236 0.89319 0.87725 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.13 10.64 127.77 1.36 1.23 16 2 N -0.41 -0.37 3.16 -534.30 -1.69 -2.06 16 3 C 0.03 -0.08 9.94 83.48 0.83 0.74 16 4 C -0.22 0.22 5.44 -20.12 -0.11 0.11 16 5 C -0.03 0.07 3.02 71.24 0.22 0.28 16 6 O -0.56 0.64 12.88 -148.98 -1.92 -1.28 16 7 Si 0.78 -3.06 30.59 68.60 2.10 -0.97 16 8 C -0.11 -0.01 10.28 22.57 0.23 0.22 16 9 C -0.08 -0.23 6.88 40.35 0.28 0.05 16 10 C 0.59 2.75 7.77 86.45 0.67 3.42 16 11 O -0.58 -6.51 14.24 -4.36 -0.06 -6.57 16 12 N -0.69 1.21 5.24 -444.00 -2.32 -1.11 16 13 C 0.12 -0.30 4.36 45.52 0.20 -0.10 16 14 H 0.09 0.13 7.41 -2.39 -0.02 0.12 16 15 C -0.14 0.54 7.26 31.12 0.23 0.76 16 16 C -0.07 0.41 3.85 -11.01 -0.04 0.37 16 17 H 0.11 -0.95 8.09 -2.39 -0.02 -0.97 16 18 C -0.06 0.16 5.29 -19.86 -0.11 0.06 16 19 C -0.11 0.24 8.60 22.27 0.19 0.43 16 20 C -0.10 -0.06 9.79 22.29 0.22 0.16 16 21 C -0.11 -0.28 6.22 22.31 0.14 -0.14 16 22 Br -0.06 -0.23 33.70 -20.37 -0.69 -0.92 16 23 C -0.10 -0.06 9.79 22.29 0.22 0.16 16 24 C -0.11 0.25 9.71 22.27 0.22 0.47 16 25 C -0.12 0.80 7.29 31.12 0.23 1.03 16 26 H 0.08 -0.19 8.14 -2.38 -0.02 -0.21 16 27 H 0.09 0.20 6.22 -2.38 -0.01 0.19 16 28 H 0.11 -0.97 8.14 -2.39 -0.02 -0.99 16 29 H 0.20 -1.76 6.19 -2.91 -0.02 -1.78 16 30 H 0.10 -0.01 7.96 -2.39 -0.02 -0.03 16 31 H 0.39 -3.50 8.70 -74.06 -0.64 -4.15 16 32 H -0.30 -1.34 7.11 99.48 0.71 -0.64 16 33 H -0.28 -0.13 7.11 99.48 0.71 0.58 16 34 H 0.16 -0.55 7.50 -2.91 -0.02 -0.57 16 35 H 0.42 -2.71 7.66 -92.71 -0.71 -3.42 16 36 H 0.10 -0.46 6.33 -2.39 -0.02 -0.47 16 37 H 0.07 -0.10 8.14 -2.39 -0.02 -0.11 16 38 H 0.15 -0.83 6.68 -2.91 -0.02 -0.85 16 39 H 0.14 -0.17 8.06 -2.91 -0.02 -0.19 16 40 H 0.14 -0.19 8.06 -2.91 -0.02 -0.21 16 41 H 0.15 -0.97 8.05 -2.91 -0.02 -0.99 16 42 H 0.09 -0.68 8.14 -2.39 -0.02 -0.69 16 43 H 0.10 -0.71 7.72 -2.39 -0.02 -0.73 16 Total: 0.00 -19.90 377.34 0.13 -19.77 By element: Atomic # 1 Polarization: -15.87 SS G_CDS: -0.25 Total: -16.12 kcal Atomic # 6 Polarization: 4.30 SS G_CDS: 4.96 Total: 9.26 kcal Atomic # 7 Polarization: 0.85 SS G_CDS: -4.01 Total: -3.17 kcal Atomic # 8 Polarization: -5.87 SS G_CDS: -1.98 Total: -7.85 kcal Atomic # 14 Polarization: -3.06 SS G_CDS: 2.10 Total: -0.97 kcal Atomic # 35 Polarization: -0.23 SS G_CDS: -0.69 Total: -0.92 kcal Total: -19.90 0.13 -19.77 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_10803934.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 65.117 kcal (2) G-P(sol) polarization free energy of solvation -19.897 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 45.219 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.127 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.770 kcal (6) G-S(sol) free energy of system = (1) + (5) 45.347 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds