Wall clock time and date at job start Sat Mar 6 2021 11:10:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.37646 * 125.67682 * 2 1 4 4 C 1.46680 * 126.23547 * 359.97438 * 3 2 1 5 5 O 1.21692 * 119.99804 * 5.26441 * 4 3 2 6 6 N 1.34780 * 120.00225 * 185.25854 * 4 3 2 7 7 C 1.46494 * 119.99928 * 174.74385 * 6 4 3 8 8 H 1.09003 * 112.85518 * 336.20866 * 7 6 4 9 9 C 1.53785 * 113.61332 * 107.50743 * 7 6 4 10 10 C 1.53779 * 87.08167 * 89.11587 * 9 7 6 11 11 H 1.09005 * 113.61502 * 270.88641 * 10 9 7 12 12 C 1.50695 * 113.61565 * 139.98347 * 10 9 7 13 13 C 1.38238 * 119.98838 * 322.23166 * 12 10 9 14 14 C 1.38220 * 120.00869 * 179.73024 * 13 12 10 15 15 C 1.38325 * 119.98931 * 0.53974 * 14 13 12 16 16 Br 1.89099 * 120.01005 * 179.70767 * 15 14 13 17 17 C 1.38320 * 119.98168 * 359.73197 * 15 14 13 18 18 C 1.38218 * 119.98852 * 359.97438 * 17 15 14 19 19 C 1.53777 * 87.07896 * 25.43413 * 10 9 7 20 20 C 1.37869 * 107.53512 * 180.24137 * 3 2 1 21 21 C 1.39837 * 107.08063 * 359.59038 * 20 3 2 22 22 C 1.35451 * 107.86584 * 0.41251 * 21 20 3 23 23 C 1.50703 * 125.56328 * 179.72384 * 22 21 20 24 24 O 1.42906 * 109.46867 * 210.02717 * 23 22 21 25 25 Si 1.86298 * 109.46994 * 330.02201 * 23 22 21 26 26 H 1.08997 * 109.47498 * 94.12743 * 1 2 3 27 27 H 1.09003 * 109.47408 * 214.12669 * 1 2 3 28 28 H 1.09002 * 109.47198 * 334.12276 * 1 2 3 29 29 H 0.96998 * 119.99283 * 354.75464 * 6 4 3 30 30 H 1.08994 * 113.61734 * 203.66517 * 9 7 6 31 31 H 1.09006 * 113.61021 * 334.56747 * 9 7 6 32 32 H 1.08003 * 119.99490 * 359.97408 * 13 12 10 33 33 H 1.08008 * 120.00675 * 180.24905 * 14 13 12 34 34 H 1.07994 * 120.00872 * 179.97438 * 17 15 14 35 35 H 1.08000 * 119.99609 * 179.97438 * 18 17 15 36 36 H 1.09002 * 113.61472 * 220.01565 * 19 10 9 37 37 H 1.08998 * 113.61970 * 89.11716 * 19 10 9 38 38 H 1.07995 * 126.46372 * 179.73763 * 20 3 2 39 39 H 1.08003 * 126.06931 * 180.15724 * 21 20 3 40 40 H 1.08998 * 109.47315 * 90.02671 * 23 22 21 41 41 H 0.96696 * 114.00155 * 59.99843 * 24 23 22 42 42 H 1.48500 * 110.00175 * 58.68529 * 25 23 22 43 43 H 1.48503 * 110.00206 * 180.02562 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1181 0.0000 4 6 1.8124 2.5124 -0.0005 5 8 0.6258 2.7650 0.0957 6 7 2.7080 3.5139 -0.1074 7 6 2.2470 4.8995 -0.2239 8 1 1.2341 4.9769 -0.6191 9 6 2.4802 5.7351 1.0459 10 6 3.8593 6.0890 0.4649 11 1 4.6431 5.3832 0.7399 12 6 4.2582 7.5249 0.6886 13 6 3.3087 8.5264 0.6076 14 6 3.6730 9.8430 0.8182 15 6 4.9900 10.1596 1.0989 16 35 5.4906 11.9614 1.3790 17 6 5.9407 9.1577 1.1743 18 6 5.5744 7.8408 0.9696 19 6 3.2540 5.8270 -0.9242 20 6 3.5779 0.6889 -0.0055 21 6 3.5521 -0.7093 0.0007 22 6 2.2554 -1.1009 0.0004 23 6 1.7708 -2.5279 0.0001 24 8 0.5132 -2.6037 -0.6743 25 14 3.0120 -3.6050 -0.8775 26 1 -0.3634 -0.0740 -1.0249 27 1 -0.3634 -0.8507 0.5766 28 1 -0.3634 0.9246 0.4485 29 1 3.6578 3.3171 -0.1074 30 1 1.8110 6.5909 1.1344 31 1 2.5301 5.1395 1.9574 32 1 2.2814 8.2797 0.3837 33 1 2.9304 10.6251 0.7589 34 1 6.9691 9.4044 1.3931 35 1 6.3167 7.0585 1.0280 36 1 3.9287 5.3057 -1.6033 37 1 2.7964 6.7079 -1.3744 38 1 4.4583 1.3144 -0.0110 39 1 4.4131 -1.3612 0.0010 40 1 1.6534 -2.8720 1.0277 41 1 0.5429 -2.3123 -1.5958 42 1 4.3324 -3.5102 -0.2047 43 1 2.5455 -5.0148 -0.8852 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_10803936.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:10:48 Heat of formation + Delta-G solvation = 45.809358 kcal Electronic energy + Delta-G solvation = -26804.160307 eV Core-core repulsion = 22864.031984 eV Total energy + Delta-G solvation = -3940.128323 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.057 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -42.62512 -41.46299 -40.14503 -38.75581 -37.71865 -34.98130 -33.74527 -33.03744 -32.03403 -31.36280 -30.25438 -27.51123 -27.11555 -26.69208 -25.59772 -23.93821 -23.30845 -22.39741 -21.57004 -20.54995 -20.05554 -18.88406 -18.25805 -17.84349 -17.11776 -16.93283 -16.57163 -16.22043 -16.04835 -15.97180 -15.47649 -15.38437 -15.02832 -14.79305 -14.68237 -14.53805 -14.44543 -14.38026 -14.26395 -13.70190 -13.50603 -13.42939 -13.24098 -13.02550 -12.89334 -12.39482 -12.21934 -12.05460 -12.01761 -11.84819 -11.41010 -11.28156 -11.21832 -11.14591 -10.69648 -10.18406 -9.99899 -9.76453 -9.50359 -9.11332 -4.90716 0.06261 0.33091 0.35661 0.66157 1.17673 1.52373 1.70758 1.76184 2.03083 2.30222 2.33509 2.57396 3.33291 3.45257 3.56835 3.65534 3.67680 3.75155 3.83937 3.96007 3.96579 3.97296 4.21125 4.30309 4.34892 4.36844 4.42232 4.43225 4.52695 4.62256 4.71615 4.73312 4.78628 4.85626 4.90587 5.03142 5.04428 5.05686 5.12298 5.16823 5.24490 5.25449 5.49101 5.64434 5.73005 5.84865 5.97673 6.11957 6.47032 6.59368 7.12372 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.069 3.931 2 N -0.402 5.402 3 C -0.080 4.080 4 C 0.590 3.410 5 O -0.584 6.584 6 N -0.687 5.687 7 C 0.119 3.881 8 H 0.088 0.912 9 C -0.144 4.144 10 C -0.067 4.067 11 H 0.117 0.883 12 C -0.056 4.056 13 C -0.115 4.115 14 C -0.100 4.100 15 C -0.110 4.110 16 Br -0.064 7.064 17 C -0.099 4.099 18 C -0.112 4.112 19 C -0.122 4.122 20 C -0.123 4.123 21 C -0.214 4.214 22 C 0.014 3.986 23 C -0.058 4.058 24 O -0.555 6.555 25 Si 0.810 3.190 26 H 0.087 0.913 27 H 0.092 0.908 28 H 0.083 0.917 29 H 0.417 0.583 30 H 0.098 0.902 31 H 0.065 0.935 32 H 0.146 0.854 33 H 0.137 0.863 34 H 0.139 0.861 35 H 0.152 0.848 36 H 0.092 0.908 37 H 0.103 0.897 38 H 0.175 0.825 39 H 0.161 0.839 40 H 0.112 0.888 41 H 0.394 0.606 42 H -0.273 1.273 43 H -0.296 1.296 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.861 -2.239 -3.790 5.855 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 N -0.075 5.075 3 C -0.193 4.193 4 C 0.379 3.621 5 O -0.466 6.466 6 N -0.338 5.338 7 C 0.013 3.987 8 H 0.106 0.894 9 C -0.182 4.182 10 C -0.085 4.085 11 H 0.135 0.865 12 C -0.056 4.056 13 C -0.133 4.133 14 C -0.119 4.119 15 C -0.190 4.190 16 Br 0.021 6.979 17 C -0.119 4.119 18 C -0.131 4.131 19 C -0.160 4.160 20 C -0.149 4.149 21 C -0.237 4.237 22 C -0.104 4.104 23 C -0.167 4.167 24 O -0.362 6.362 25 Si 0.713 3.287 26 H 0.105 0.895 27 H 0.111 0.889 28 H 0.101 0.899 29 H 0.255 0.745 30 H 0.117 0.883 31 H 0.084 0.916 32 H 0.164 0.836 33 H 0.155 0.845 34 H 0.156 0.844 35 H 0.170 0.830 36 H 0.111 0.889 37 H 0.122 0.878 38 H 0.192 0.808 39 H 0.179 0.821 40 H 0.129 0.871 41 H 0.244 0.756 42 H -0.199 1.199 43 H -0.223 1.223 Dipole moment (debyes) X Y Z Total from point charges 3.147 -2.207 -3.000 4.875 hybrid contribution -0.228 0.111 0.850 0.887 sum 2.918 -2.096 -2.150 4.187 Atomic orbital electron populations 1.22308 0.75598 1.04669 1.04571 1.43893 1.07194 1.04429 1.51971 1.20146 0.91358 0.87234 1.20576 1.17176 0.85269 0.84249 0.75376 1.90774 1.18072 1.85302 1.52490 1.45170 1.10071 1.04961 1.73602 1.21863 0.99344 0.79773 0.97683 0.89422 1.23576 0.96829 1.00133 0.97707 1.21656 0.97425 0.92231 0.97177 0.86517 1.20014 0.93262 0.95594 0.96768 1.21248 1.00767 0.91398 0.99921 1.21296 0.94299 0.97984 0.98356 1.21980 0.97059 0.90886 1.09037 1.96753 1.92582 1.12786 1.95759 1.21329 0.99441 0.92458 0.98674 1.21361 0.96554 0.95992 0.99162 1.23380 0.97415 0.99323 0.95869 1.21661 0.94481 0.95468 1.03291 1.20914 0.95296 0.95852 1.11681 1.21425 0.91216 0.89440 1.08338 1.25200 0.94771 0.94210 1.02537 1.86468 1.30108 1.89147 1.30506 0.92971 0.73565 0.74086 0.88117 0.89458 0.88928 0.89879 0.74472 0.88332 0.91599 0.83614 0.84529 0.84351 0.83024 0.88932 0.87840 0.80794 0.82111 0.87057 0.75586 1.19909 1.22333 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.19 9.38 127.77 1.20 1.38 16 2 N -0.40 -1.36 3.16 -519.71 -1.64 -3.01 16 3 C -0.08 -0.25 6.88 40.35 0.28 0.03 16 4 C 0.59 2.77 7.77 86.45 0.67 3.44 16 5 O -0.58 -7.05 14.21 -4.32 -0.06 -7.11 16 6 N -0.69 1.87 5.25 -444.00 -2.33 -0.46 16 7 C 0.12 -0.37 4.29 45.52 0.20 -0.18 16 8 H 0.09 0.10 7.53 -2.39 -0.02 0.09 16 9 C -0.14 0.57 7.25 31.12 0.23 0.80 16 10 C -0.07 0.47 3.86 -11.02 -0.04 0.43 16 11 H 0.12 -1.16 8.10 -2.38 -0.02 -1.18 16 12 C -0.06 0.21 5.29 -19.86 -0.11 0.10 16 13 C -0.11 0.28 8.59 22.27 0.19 0.47 16 14 C -0.10 -0.04 9.79 22.29 0.22 0.18 16 15 C -0.11 -0.23 6.22 22.31 0.14 -0.09 16 16 Br -0.06 -0.22 33.70 -20.37 -0.69 -0.90 16 17 C -0.10 0.01 9.79 22.28 0.22 0.23 16 18 C -0.11 0.35 9.71 22.27 0.22 0.57 16 19 C -0.12 0.92 7.29 31.12 0.23 1.15 16 20 C -0.12 0.21 10.36 22.57 0.23 0.44 16 21 C -0.21 0.25 9.37 22.01 0.21 0.45 16 22 C 0.01 0.01 6.14 41.35 0.25 0.26 16 23 C -0.06 0.12 2.90 71.24 0.21 0.33 16 24 O -0.55 1.13 10.48 -148.98 -1.56 -0.43 16 25 Si 0.81 -3.85 31.29 68.60 2.15 -1.70 16 26 H 0.09 -0.02 8.14 -2.39 -0.02 -0.04 16 27 H 0.09 0.18 7.07 -2.39 -0.02 0.16 16 28 H 0.08 0.59 6.00 -2.39 -0.01 0.57 16 29 H 0.42 -3.58 7.60 -92.71 -0.70 -4.29 16 30 H 0.10 -0.43 6.32 -2.39 -0.02 -0.44 16 31 H 0.07 -0.09 8.14 -2.38 -0.02 -0.11 16 32 H 0.15 -0.84 6.68 -2.91 -0.02 -0.86 16 33 H 0.14 -0.17 8.06 -2.91 -0.02 -0.20 16 34 H 0.14 -0.29 8.06 -2.91 -0.02 -0.31 16 35 H 0.15 -1.18 8.06 -2.91 -0.02 -1.21 16 36 H 0.09 -0.87 8.14 -2.39 -0.02 -0.89 16 37 H 0.10 -0.79 7.71 -2.39 -0.02 -0.80 16 38 H 0.17 -1.51 7.45 -2.91 -0.02 -1.53 16 39 H 0.16 -0.70 6.62 -2.91 -0.02 -0.71 16 40 H 0.11 -0.09 7.96 -2.39 -0.02 -0.11 16 41 H 0.39 -3.52 8.70 -74.06 -0.64 -4.16 16 42 H -0.27 0.34 6.76 99.48 0.67 1.01 16 43 H -0.30 -0.71 7.11 99.48 0.71 -0.01 16 Total: 0.00 -18.76 373.19 0.12 -18.64 By element: Atomic # 1 Polarization: -14.74 SS G_CDS: -0.28 Total: -15.02 kcal Atomic # 6 Polarization: 5.45 SS G_CDS: 4.53 Total: 9.99 kcal Atomic # 7 Polarization: 0.51 SS G_CDS: -3.97 Total: -3.46 kcal Atomic # 8 Polarization: -5.92 SS G_CDS: -1.62 Total: -7.54 kcal Atomic # 14 Polarization: -3.85 SS G_CDS: 2.15 Total: -1.70 kcal Atomic # 35 Polarization: -0.22 SS G_CDS: -0.69 Total: -0.90 kcal Total: -18.76 0.12 -18.64 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_10803936.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 64.452 kcal (2) G-P(sol) polarization free energy of solvation -18.759 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 45.693 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.117 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.642 kcal (6) G-S(sol) free energy of system = (1) + (5) 45.809 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds