Wall clock time and date at job start Sat Mar 6 2021 11:10:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86304 * 109.46938 * 2 1 4 4 C 1.50698 * 109.46801 * 120.00191 * 2 1 3 5 5 C 1.36443 * 120.29424 * 120.00409 * 4 2 1 6 6 C 1.40098 * 119.25107 * 179.97438 * 5 4 2 7 7 C 1.40856 * 132.86089 * 180.02562 * 6 5 4 8 8 C 1.46559 * 126.58127 * 359.93924 * 7 6 5 9 9 O 1.21719 * 120.00400 * 0.02562 * 8 7 6 10 10 N 1.34785 * 120.00111 * 180.02562 * 8 7 6 11 11 C 1.46499 * 120.00152 * 179.97438 * 10 8 7 12 12 H 1.09005 * 112.84634 * 336.20035 * 11 10 8 13 13 C 1.53777 * 113.61475 * 107.50023 * 11 10 8 14 14 C 1.53779 * 87.08167 * 89.11702 * 13 11 10 15 15 H 1.09000 * 113.61626 * 270.88462 * 14 13 11 16 16 C 1.50697 * 113.69311 * 139.98859 * 14 13 11 17 17 C 1.38236 * 119.98967 * 322.19726 * 16 14 13 18 18 C 1.38223 * 120.00844 * 179.72340 * 17 16 14 19 19 C 1.38328 * 119.98963 * 0.54576 * 18 17 16 20 20 Br 1.89093 * 120.01094 * 179.70571 * 19 18 17 21 21 C 1.38328 * 119.97708 * 359.72556 * 19 18 17 22 22 C 1.38214 * 119.99006 * 359.97438 * 21 19 18 23 23 C 1.53772 * 113.61542 * 205.00068 * 11 10 8 24 24 C 1.40551 * 106.83791 * 179.97438 * 7 6 5 25 25 N 1.30739 * 108.74794 * 0.02562 * 24 7 6 26 26 N 1.36574 * 120.23521 * 359.97438 * 6 5 4 27 27 C 1.36242 * 120.07615 * 359.77635 * 26 6 5 28 28 C 1.35186 * 120.70730 * 0.45259 * 27 26 6 29 29 H 0.96696 * 114.00478 * 300.00041 * 1 2 3 30 30 H 1.08996 * 109.46929 * 239.99945 * 2 1 3 31 31 H 1.48495 * 109.99583 * 178.67608 * 3 2 1 32 32 H 1.48498 * 110.00016 * 300.00229 * 3 2 1 33 33 H 1.08001 * 120.37639 * 359.94939 * 5 4 2 34 34 H 0.97000 * 119.99519 * 359.97438 * 10 8 7 35 35 H 1.08997 * 113.61567 * 203.66358 * 13 11 10 36 36 H 1.09002 * 113.61711 * 334.57162 * 13 11 10 37 37 H 1.07994 * 119.99599 * 359.97169 * 17 16 14 38 38 H 1.07995 * 120.00649 * 180.29559 * 18 17 16 39 39 H 1.08005 * 120.00152 * 180.02562 * 21 19 18 40 40 H 1.08007 * 119.99300 * 180.02562 * 22 21 19 41 41 H 1.09003 * 113.61539 * 25.43230 * 23 11 10 42 42 H 1.08999 * 113.62059 * 156.24837 * 23 11 10 43 43 H 1.08001 * 125.62953 * 180.02562 * 24 7 6 44 44 H 1.08004 * 119.64953 * 180.29253 * 27 26 6 45 45 H 1.08002 * 119.84005 * 179.75125 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.7161 -1.8203 1.1122 6 6 3.1714 -2.4633 2.2707 7 6 3.9759 -3.6000 2.4823 8 6 4.5758 -4.4499 1.4499 9 8 4.3958 -4.1970 0.2730 10 7 5.3269 -5.5117 1.8038 11 6 5.9261 -6.3616 0.7719 12 1 5.3938 -6.3130 -0.1781 13 6 7.4480 -6.1868 0.6371 14 6 7.5896 -7.2877 1.7014 15 1 7.5986 -6.9086 2.7233 16 6 8.7118 -8.2552 1.4263 17 6 8.9795 -8.6522 0.1295 18 6 10.0124 -9.5351 -0.1239 19 6 10.7709 -10.0301 0.9216 20 35 12.1788 -11.2445 0.5765 21 6 10.4990 -9.6369 2.2196 22 6 9.4700 -8.7492 2.4713 23 6 6.2119 -7.7965 1.2451 24 6 4.0923 -3.7632 3.8734 25 7 3.4189 -2.8120 4.4659 26 7 2.8321 -1.9820 3.5029 27 6 2.0522 -0.8701 3.6106 28 6 1.5977 -0.2361 2.5065 29 1 -0.3934 0.4417 0.7650 30 1 1.7923 -0.5138 -0.8900 31 1 3.5345 1.7703 0.0322 32 1 1.5614 2.4679 -1.2084 33 1 2.9831 -2.1990 0.1367 34 1 5.4707 -5.7130 2.7417 35 1 7.8353 -6.4726 -0.3409 36 1 7.8065 -5.2118 0.9671 37 1 8.3842 -8.2694 -0.6861 38 1 10.2245 -9.8415 -1.1375 39 1 11.0913 -10.0228 3.0362 40 1 9.2579 -8.4417 3.4848 41 1 5.5725 -8.1211 2.0661 42 1 6.2599 -8.5226 0.4337 43 1 4.6466 -4.5453 4.3709 44 1 1.7920 -0.4927 4.5885 45 1 0.9770 0.6418 2.6081 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_11618758.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:10:53 Heat of formation + Delta-G solvation = 97.639027 kcal Electronic energy + Delta-G solvation = -30817.369005 eV Core-core repulsion = 26429.383853 eV Total energy + Delta-G solvation = -4387.985152 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 428.052 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -43.31162 -41.52703 -40.24183 -39.34309 -38.70855 -37.20776 -34.70661 -34.17654 -33.01488 -32.09069 -32.04072 -30.65880 -29.96494 -27.37980 -26.69540 -25.98976 -24.92472 -24.07244 -23.66844 -23.05649 -22.32664 -21.40584 -20.12904 -19.19498 -18.47169 -18.07271 -17.77875 -17.43716 -16.99619 -16.96572 -16.56003 -16.37083 -16.15074 -15.85895 -15.74073 -15.40449 -15.29931 -15.09810 -14.61088 -14.50297 -14.48143 -14.23912 -14.22990 -14.01164 -13.52372 -13.46074 -13.43188 -13.13515 -12.90109 -12.42138 -12.39130 -12.23641 -12.05040 -12.00537 -11.84555 -11.57361 -11.41267 -11.29109 -11.21237 -11.01533 -10.78772 -10.26466 -10.11198 -10.00652 -9.51324 -8.80718 -5.07826 -0.57336 -0.10657 0.05176 0.31972 0.64863 0.99944 1.05104 1.20021 1.67422 1.95726 2.07411 2.17152 2.45767 2.56422 3.08190 3.23576 3.45762 3.46746 3.60092 3.65475 3.71973 3.74741 3.83037 3.87630 3.94725 3.95160 3.98503 4.18618 4.20709 4.35675 4.35881 4.38942 4.41730 4.61357 4.66082 4.71051 4.76674 4.77700 4.89395 4.91140 5.02557 5.04875 5.10441 5.15500 5.17210 5.23217 5.25206 5.28565 5.53187 5.66653 5.68069 5.83672 6.28734 6.58104 6.76461 7.27217 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.077 4.077 3 Si 0.815 3.185 4 C -0.053 4.053 5 C -0.135 4.135 6 C 0.151 3.849 7 C -0.347 4.347 8 C 0.600 3.400 9 O -0.595 6.595 10 N -0.696 5.696 11 C 0.117 3.883 12 H 0.083 0.917 13 C -0.143 4.143 14 C -0.065 4.065 15 H 0.118 0.882 16 C -0.056 4.056 17 C -0.115 4.115 18 C -0.100 4.100 19 C -0.110 4.110 20 Br -0.063 7.063 21 C -0.099 4.099 22 C -0.112 4.112 23 C -0.123 4.123 24 C 0.132 3.868 25 N -0.337 5.337 26 N -0.273 5.273 27 C 0.115 3.885 28 C -0.146 4.146 29 H 0.401 0.599 30 H 0.105 0.895 31 H -0.303 1.303 32 H -0.290 1.290 33 H 0.137 0.863 34 H 0.414 0.586 35 H 0.096 0.904 36 H 0.066 0.934 37 H 0.145 0.855 38 H 0.137 0.863 39 H 0.139 0.861 40 H 0.153 0.847 41 H 0.090 0.910 42 H 0.101 0.899 43 H 0.235 0.765 44 H 0.214 0.786 45 H 0.222 0.778 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.788 4.657 6.712 9.005 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.355 6.355 2 C -0.185 4.185 3 Si 0.719 3.281 4 C -0.060 4.060 5 C -0.155 4.155 6 C 0.029 3.971 7 C -0.362 4.362 8 C 0.390 3.610 9 O -0.477 6.477 10 N -0.347 5.347 11 C 0.012 3.988 12 H 0.101 0.899 13 C -0.182 4.182 14 C -0.083 4.083 15 H 0.136 0.864 16 C -0.056 4.056 17 C -0.134 4.134 18 C -0.119 4.119 19 C -0.190 4.190 20 Br 0.022 6.978 21 C -0.119 4.119 22 C -0.130 4.130 23 C -0.161 4.161 24 C -0.049 4.049 25 N -0.158 5.158 26 N -0.037 5.037 27 C -0.010 4.010 28 C -0.167 4.167 29 H 0.252 0.748 30 H 0.123 0.877 31 H -0.231 1.231 32 H -0.217 1.217 33 H 0.155 0.845 34 H 0.251 0.749 35 H 0.115 0.885 36 H 0.085 0.915 37 H 0.162 0.838 38 H 0.154 0.846 39 H 0.157 0.843 40 H 0.170 0.830 41 H 0.109 0.891 42 H 0.119 0.881 43 H 0.251 0.749 44 H 0.231 0.769 45 H 0.239 0.761 Dipole moment (debyes) X Y Z Total from point charges -3.125 5.026 6.054 8.466 hybrid contribution 0.620 -1.228 -0.974 1.686 sum -2.505 3.798 5.079 6.819 Atomic orbital electron populations 1.86585 1.15927 1.82279 1.50749 1.25330 0.85983 1.11193 0.95983 0.93872 0.76897 0.72255 0.85061 1.20771 0.94104 0.93529 0.97547 1.20640 1.01042 0.96612 0.97233 1.19474 0.96000 0.94654 0.86941 1.19686 1.17686 1.04482 0.94343 1.17056 0.77118 0.79935 0.86849 1.90755 1.63516 1.73013 1.20419 1.45208 1.51343 1.27728 1.10443 1.21811 0.93716 0.91133 0.92162 0.89894 1.23564 0.95521 0.99000 1.00100 1.21641 0.91946 0.94028 1.00686 0.86374 1.20018 0.96152 0.96431 0.93045 1.21242 0.97334 0.97277 0.97548 1.21289 0.95016 0.96902 0.98726 1.21979 0.98304 1.01619 0.97050 1.96750 1.45857 1.59037 1.96170 1.21335 0.98137 0.97395 0.94997 1.21360 0.94579 0.96638 1.00439 1.23375 0.95346 0.94818 1.02601 1.24585 0.93453 0.95842 0.90995 1.77556 1.19554 1.07251 1.11394 1.46381 1.32581 1.19681 1.05050 1.22479 0.90628 0.83833 1.04089 1.21363 1.03445 1.03646 0.88196 0.74791 0.87733 1.23075 1.21687 0.84535 0.74859 0.88518 0.91507 0.83774 0.84551 0.84278 0.82956 0.89109 0.88095 0.74926 0.76913 0.76109 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.97 12.88 -148.98 -1.92 0.05 16 2 C -0.08 0.22 2.84 71.24 0.20 0.42 16 3 Si 0.82 -4.36 31.96 68.60 2.19 -2.17 16 4 C -0.05 0.10 4.53 -19.82 -0.09 0.01 16 5 C -0.14 -0.81 9.35 22.30 0.21 -0.60 16 6 C 0.15 1.06 6.76 39.50 0.27 1.32 16 7 C -0.35 -2.13 6.17 -19.90 -0.12 -2.25 16 8 C 0.60 4.73 7.78 86.41 0.67 5.40 16 9 O -0.59 -9.62 15.30 -4.41 -0.07 -9.69 16 10 N -0.70 0.31 5.25 -444.10 -2.33 -2.02 16 11 C 0.12 -0.08 4.32 45.51 0.20 0.12 16 12 H 0.08 0.37 7.46 -2.38 -0.02 0.35 16 13 C -0.14 0.32 7.26 31.12 0.23 0.55 16 14 C -0.06 0.37 3.85 -11.01 -0.04 0.33 16 15 H 0.12 -1.06 8.09 -2.39 -0.02 -1.08 16 16 C -0.06 0.14 5.29 -19.87 -0.11 0.04 16 17 C -0.12 0.14 8.60 22.27 0.19 0.33 16 18 C -0.10 -0.13 9.79 22.29 0.22 0.08 16 19 C -0.11 -0.32 6.22 22.31 0.14 -0.18 16 20 Br -0.06 -0.25 33.70 -20.37 -0.69 -0.94 16 21 C -0.10 -0.06 9.79 22.29 0.22 0.16 16 22 C -0.11 0.26 9.71 22.26 0.22 0.48 16 23 C -0.12 0.68 7.29 31.12 0.23 0.91 16 24 C 0.13 0.07 11.44 85.42 0.98 1.05 16 25 N -0.34 -1.31 12.57 -56.62 -0.71 -2.03 16 26 N -0.27 -0.81 3.86 -187.27 -0.72 -1.53 16 27 C 0.12 -0.67 11.17 83.30 0.93 0.26 16 28 C -0.15 1.37 8.38 22.03 0.18 1.56 16 29 H 0.40 -5.91 8.09 -74.06 -0.60 -6.51 16 30 H 0.11 0.07 7.71 -2.39 -0.02 0.05 16 31 H -0.30 -0.84 7.11 99.48 0.71 -0.14 16 32 H -0.29 -0.55 7.11 99.48 0.71 0.15 16 33 H 0.14 1.35 7.01 -2.91 -0.02 1.33 16 34 H 0.41 -3.05 7.62 -92.71 -0.71 -3.75 16 35 H 0.10 -0.25 6.33 -2.39 -0.02 -0.26 16 36 H 0.07 0.00 8.14 -2.39 -0.02 -0.02 16 37 H 0.14 -0.60 6.68 -2.91 -0.02 -0.62 16 38 H 0.14 -0.04 8.06 -2.91 -0.02 -0.07 16 39 H 0.14 -0.22 8.06 -2.91 -0.02 -0.24 16 40 H 0.15 -1.09 8.05 -2.91 -0.02 -1.12 16 41 H 0.09 -0.67 8.14 -2.39 -0.02 -0.68 16 42 H 0.10 -0.54 7.72 -2.39 -0.02 -0.56 16 43 H 0.23 -2.20 7.46 -2.91 -0.02 -2.22 16 44 H 0.21 -2.86 8.06 -2.91 -0.02 -2.89 16 45 H 0.22 -4.69 7.31 -2.91 -0.02 -4.71 16 Total: 0.00 -31.59 400.27 0.27 -31.31 By element: Atomic # 1 Polarization: -22.78 SS G_CDS: -0.20 Total: -22.98 kcal Atomic # 6 Polarization: 5.27 SS G_CDS: 4.72 Total: 9.99 kcal Atomic # 7 Polarization: -1.81 SS G_CDS: -3.77 Total: -5.58 kcal Atomic # 8 Polarization: -7.66 SS G_CDS: -1.99 Total: -9.64 kcal Atomic # 14 Polarization: -4.36 SS G_CDS: 2.19 Total: -2.17 kcal Atomic # 35 Polarization: -0.25 SS G_CDS: -0.69 Total: -0.94 kcal Total: -31.59 0.27 -31.31 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_11618758.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 128.953 kcal (2) G-P(sol) polarization free energy of solvation -31.586 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 97.367 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.272 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.314 kcal (6) G-S(sol) free energy of system = (1) + (5) 97.639 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds