Wall clock time and date at job start Sat Mar 6 2021 11:11:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86303 * 109.47052 * 2 1 4 4 C 1.50697 * 109.47068 * 240.00188 * 2 1 3 5 5 C 1.37858 * 119.89023 * 300.28208 * 4 2 1 6 6 C 1.39661 * 119.87740 * 180.27745 * 5 4 2 7 7 C 1.47686 * 120.16676 * 179.71543 * 6 5 4 8 8 O 1.21576 * 120.00146 * 179.72277 * 7 6 5 9 9 N 1.34778 * 120.00293 * 359.72536 * 7 6 5 10 10 C 1.46503 * 120.00501 * 180.02562 * 9 7 6 11 11 H 1.09007 * 112.84569 * 23.79879 * 10 9 7 12 12 C 1.53771 * 113.61562 * 154.99623 * 10 9 7 13 13 C 1.53789 * 87.08100 * 89.20088 * 12 10 9 14 14 H 1.08996 * 113.61194 * 270.80250 * 13 12 10 15 15 C 1.50696 * 113.61444 * 139.97837 * 13 12 10 16 16 C 1.38237 * 119.99226 * 301.25618 * 15 13 12 17 17 C 1.38217 * 120.01513 * 180.27497 * 16 15 13 18 18 C 1.38326 * 119.98844 * 359.97438 * 17 16 15 19 19 Br 1.89102 * 120.01478 * 180.02562 * 18 17 16 20 20 C 1.38328 * 119.97878 * 0.02562 * 18 17 16 21 21 C 1.38217 * 119.99010 * 359.97438 * 20 18 17 22 22 C 1.53784 * 87.17108 * 25.38828 * 13 12 10 23 23 C 1.39828 * 119.66813 * 359.44097 * 6 5 4 24 24 F 1.35097 * 120.11370 * 180.29641 * 23 6 5 25 25 C 1.38325 * 119.77643 * 0.27511 * 23 6 5 26 26 C 1.38208 * 120.11847 * 0.02562 * 25 23 6 27 27 H 0.96695 * 113.99925 * 59.99949 * 1 2 3 28 28 H 1.08999 * 109.47106 * 119.99759 * 2 1 3 29 29 H 1.48496 * 109.99966 * 298.68614 * 3 2 1 30 30 H 1.48501 * 109.99991 * 60.00189 * 3 2 1 31 31 H 1.07999 * 120.06329 * 0.02562 * 5 4 2 32 32 H 0.97002 * 119.99639 * 359.97438 * 9 7 6 33 33 H 1.09005 * 113.61852 * 334.65633 * 12 10 9 34 34 H 1.08997 * 113.69333 * 203.75715 * 12 10 9 35 35 H 1.08002 * 119.99480 * 0.27249 * 16 15 13 36 36 H 1.08000 * 120.00779 * 179.97438 * 17 16 15 37 37 H 1.08002 * 120.00878 * 179.97438 * 20 18 17 38 38 H 1.08000 * 119.99610 * 180.02562 * 21 20 18 39 39 H 1.09002 * 113.61119 * 89.15367 * 22 13 12 40 40 H 1.08996 * 113.61625 * 220.05875 * 22 13 12 41 41 H 1.07999 * 119.94308 * 179.97438 * 25 23 6 42 42 H 1.07997 * 119.83065 * 180.02562 * 26 25 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.5921 -2.0285 -1.4494 6 6 2.0626 -2.6883 -2.5868 7 6 1.7083 -4.1022 -2.8245 8 8 2.1153 -4.6721 -3.8182 9 7 0.9337 -4.7607 -1.9397 10 6 0.5826 -6.1635 -2.1751 11 1 1.2950 -6.6752 -2.8223 12 6 0.2505 -6.9394 -0.8897 13 6 -1.2064 -6.4884 -1.0876 14 1 -1.4360 -5.5339 -0.6141 15 6 -2.2183 -7.5585 -0.7685 16 6 -2.1897 -8.7615 -1.4489 17 6 -3.1210 -9.7412 -1.1606 18 6 -4.0816 -9.5180 -0.1907 19 35 -5.3558 -10.8581 0.2049 20 6 -4.1099 -8.3140 0.4900 21 6 -3.1781 -7.3350 0.2009 22 6 -0.8862 -6.3707 -2.5871 23 6 2.8660 -2.0018 -3.5025 24 9 3.3210 -2.6295 -4.6089 25 6 3.1929 -0.6777 -3.2720 26 6 2.7276 -0.0354 -2.1402 27 1 -0.3933 0.4417 -0.7650 28 1 1.7924 -0.5138 0.8900 29 1 1.5878 2.4586 -1.2241 30 1 1.5616 2.4679 1.2085 31 1 0.9671 -2.5512 -0.7405 32 1 0.6092 -4.3061 -1.1467 33 1 0.7182 -6.5253 0.0036 34 1 0.3901 -8.0166 -0.9800 35 1 -1.4394 -8.9359 -2.2060 36 1 -3.0988 -10.6809 -1.6925 37 1 -4.8600 -8.1391 1.2471 38 1 -3.1999 -6.3951 0.7326 39 1 -1.0576 -7.2921 -3.1437 40 1 -1.3347 -5.4983 -3.0623 41 1 3.8136 -0.1450 -3.9773 42 1 2.9853 0.9987 -1.9650 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10390340_12335834.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:11:10 Heat of formation + Delta-G solvation = -23.731056 kcal Electronic energy + Delta-G solvation = -28560.589236 eV Core-core repulsion = 24240.728828 eV Total energy + Delta-G solvation = -4319.860408 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.037 amu Computer time = 1.82 seconds Orbital eigenvalues (eV) -49.89596 -41.83449 -40.97149 -40.00356 -38.83435 -37.72194 -34.90204 -33.33673 -32.55251 -32.29566 -32.09256 -30.31906 -26.88910 -26.81128 -26.41825 -25.27670 -24.02075 -23.34947 -22.38846 -21.72476 -20.31960 -19.30873 -18.53535 -18.45671 -17.95495 -17.42914 -16.97201 -16.87215 -16.53885 -16.37020 -16.23390 -16.09958 -15.81796 -15.75673 -15.19244 -15.14243 -14.78772 -14.60037 -14.53023 -14.40735 -14.29389 -13.72276 -13.63985 -13.57828 -13.26696 -12.99017 -12.90328 -12.51163 -12.44327 -12.13197 -12.00340 -11.89002 -11.48101 -11.36040 -11.23314 -11.14805 -10.78472 -10.47077 -10.18517 -10.07685 -9.90136 -9.55255 -5.13040 -0.56900 -0.15896 -0.00060 0.24879 0.66385 1.07366 1.42540 1.59562 1.81045 1.87387 2.41267 2.49052 2.96401 3.10765 3.26687 3.30540 3.35009 3.46569 3.49603 3.55706 3.70405 3.79669 3.82489 3.85191 3.94341 4.01534 4.24669 4.26863 4.31322 4.39572 4.48450 4.56695 4.60550 4.62945 4.65551 4.74992 4.76193 4.80808 4.85932 4.90735 4.96224 4.98874 5.15733 5.16713 5.38701 5.48201 5.51904 5.73857 6.17925 6.29945 7.06606 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.073 4.073 3 Si 0.684 3.316 4 C -0.139 4.139 5 C -0.031 4.031 6 C -0.175 4.175 7 C 0.562 3.438 8 O -0.517 6.517 9 N -0.708 5.708 10 C 0.120 3.880 11 H 0.109 0.891 12 C -0.135 4.135 13 C -0.077 4.077 14 H 0.100 0.900 15 C -0.055 4.055 16 C -0.111 4.111 17 C -0.087 4.087 18 C -0.095 4.095 19 Br -0.051 7.051 20 C -0.088 4.088 21 C -0.110 4.110 22 C -0.143 4.143 23 C 0.168 3.832 24 F -0.110 7.110 25 C -0.156 4.156 26 C -0.059 4.059 27 H 0.378 0.622 28 H 0.123 0.877 29 H -0.257 1.257 30 H -0.254 1.254 31 H 0.139 0.861 32 H 0.401 0.599 33 H 0.079 0.921 34 H 0.101 0.899 35 H 0.133 0.867 36 H 0.133 0.867 37 H 0.133 0.867 38 H 0.131 0.869 39 H 0.098 0.902 40 H 0.076 0.924 41 H 0.150 0.850 42 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.949 3.999 3.223 5.493 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.183 4.183 3 Si 0.584 3.416 4 C -0.139 4.139 5 C -0.050 4.050 6 C -0.179 4.179 7 C 0.349 3.651 8 O -0.393 6.393 9 N -0.360 5.360 10 C 0.015 3.985 11 H 0.127 0.873 12 C -0.172 4.172 13 C -0.095 4.095 14 H 0.118 0.882 15 C -0.056 4.056 16 C -0.130 4.130 17 C -0.107 4.107 18 C -0.174 4.174 19 Br 0.035 6.965 20 C -0.108 4.108 21 C -0.129 4.129 22 C -0.182 4.182 23 C 0.147 3.853 24 F -0.088 7.088 25 C -0.175 4.175 26 C -0.077 4.077 27 H 0.226 0.774 28 H 0.141 0.859 29 H -0.182 1.182 30 H -0.178 1.178 31 H 0.156 0.844 32 H 0.237 0.763 33 H 0.098 0.902 34 H 0.119 0.881 35 H 0.151 0.849 36 H 0.151 0.849 37 H 0.151 0.849 38 H 0.149 0.851 39 H 0.116 0.884 40 H 0.095 0.905 41 H 0.168 0.832 42 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 1.655 3.562 3.152 5.036 hybrid contribution -1.006 0.208 -0.370 1.092 sum 0.649 3.770 2.783 4.730 Atomic orbital electron populations 1.86611 1.17419 1.79941 1.49518 1.25019 0.84158 1.11149 0.97954 0.95004 0.91585 0.74201 0.80782 1.20277 1.00645 0.94905 0.98109 1.21013 0.95764 0.93678 0.94536 1.20045 1.04699 0.95150 0.98042 1.17965 0.78379 0.85638 0.83116 1.90880 1.52811 1.68258 1.27329 1.45532 1.52387 1.12297 1.25823 1.21907 0.96982 0.81423 0.98205 0.87307 1.23433 0.94488 1.01498 0.97829 1.21662 0.93104 0.97181 0.97564 0.88199 1.19824 0.95642 0.94782 0.95328 1.21037 0.99017 0.92850 1.00097 1.21144 0.93606 0.99885 0.96057 1.21863 0.98326 0.95231 1.01977 1.96781 1.54870 1.50565 1.94289 1.21152 0.98958 0.91804 0.98861 1.21091 0.94652 0.99296 0.97871 1.23609 0.95831 1.03489 0.95253 1.17758 0.93624 0.90541 0.83348 1.91634 1.85994 1.82075 1.49111 1.21180 1.03468 0.92930 0.99921 1.21106 0.94500 0.99827 0.92247 0.77408 0.85879 1.18194 1.17846 0.84366 0.76331 0.90242 0.88065 0.84932 0.84868 0.84918 0.85121 0.88416 0.90492 0.83194 0.84028 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 34. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.91 12.76 -35.23 -0.45 0.46 16 2 C -0.07 0.23 2.82 36.00 0.10 0.33 16 3 Si 0.68 -2.24 29.78 -169.99 -5.06 -7.31 16 4 C -0.14 0.36 5.39 -104.68 -0.56 -0.20 16 5 C -0.03 0.06 9.09 -39.19 -0.36 -0.29 16 6 C -0.18 -0.11 5.88 -104.91 -0.62 -0.73 16 7 C 0.56 1.26 7.77 -12.40 -0.10 1.17 16 8 O -0.52 -3.32 14.94 5.30 0.08 -3.24 16 9 N -0.71 0.73 5.22 -53.92 -0.28 0.45 16 10 C 0.12 -0.14 4.33 -67.03 -0.29 -0.43 16 11 H 0.11 0.06 7.46 -51.92 -0.39 -0.32 16 12 C -0.13 0.37 7.29 -25.92 -0.19 0.19 16 13 C -0.08 0.19 3.86 -90.96 -0.35 -0.16 16 14 H 0.10 -0.34 8.09 -51.93 -0.42 -0.76 16 15 C -0.06 0.06 5.29 -104.62 -0.55 -0.50 16 16 C -0.11 0.09 8.54 -39.59 -0.34 -0.25 16 17 C -0.09 -0.02 9.79 -39.56 -0.39 -0.41 16 18 C -0.09 -0.10 6.22 -39.52 -0.25 -0.34 16 19 Br -0.05 -0.07 33.70 -68.01 -2.29 -2.37 16 20 C -0.09 -0.02 9.79 -39.56 -0.39 -0.41 16 21 C -0.11 0.08 9.71 -39.59 -0.38 -0.30 16 22 C -0.14 0.23 7.27 -25.83 -0.19 0.04 16 23 C 0.17 0.24 7.29 -38.96 -0.28 -0.04 16 24 F -0.11 -0.48 15.55 2.25 0.04 -0.44 16 25 C -0.16 0.22 10.01 -39.56 -0.40 -0.17 16 26 C -0.06 0.17 8.66 -39.51 -0.34 -0.17 16 27 H 0.38 -1.59 8.70 45.56 0.40 -1.20 16 28 H 0.12 -0.50 7.96 -51.93 -0.41 -0.91 16 29 H -0.26 0.34 7.11 56.52 0.40 0.74 16 30 H -0.25 -0.11 7.11 56.52 0.40 0.30 16 31 H 0.14 -0.54 6.41 -52.49 -0.34 -0.88 16 32 H 0.40 -1.43 6.74 -40.82 -0.27 -1.71 16 33 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 34 H 0.10 -0.29 7.66 -51.93 -0.40 -0.69 16 35 H 0.13 -0.32 6.73 -52.49 -0.35 -0.68 16 36 H 0.13 -0.11 8.06 -52.49 -0.42 -0.53 16 37 H 0.13 -0.11 8.06 -52.49 -0.42 -0.53 16 38 H 0.13 -0.33 8.05 -52.49 -0.42 -0.76 16 39 H 0.10 -0.19 6.38 -51.93 -0.33 -0.52 16 40 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 41 H 0.15 -0.49 8.06 -52.49 -0.42 -0.91 16 42 H 0.14 -0.71 4.86 -52.49 -0.25 -0.97 16 LS Contribution 374.62 15.07 5.65 5.65 Total: 0.00 -8.26 374.62 -12.70 -20.96 By element: Atomic # 1 Polarization: -6.98 SS G_CDS: -4.51 Total: -11.48 kcal Atomic # 6 Polarization: 3.19 SS G_CDS: -5.87 Total: -2.67 kcal Atomic # 7 Polarization: 0.73 SS G_CDS: -0.28 Total: 0.45 kcal Atomic # 8 Polarization: -2.41 SS G_CDS: -0.37 Total: -2.78 kcal Atomic # 9 Polarization: -0.48 SS G_CDS: 0.04 Total: -0.44 kcal Atomic # 14 Polarization: -2.24 SS G_CDS: -5.06 Total: -7.31 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -2.29 Total: -2.37 kcal Total LS contribution 5.65 Total: 5.65 kcal Total: -8.26 -12.70 -20.96 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_12335834.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.772 kcal (2) G-P(sol) polarization free energy of solvation -8.260 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.032 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.699 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.959 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.731 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.82 seconds