Wall clock time and date at job start Sat Mar 6 2021 11:11:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86296 * 109.47106 * 2 1 4 4 C 1.50702 * 109.46957 * 119.99997 * 2 1 3 5 5 C 1.38241 * 120.00049 * 64.99853 * 4 2 1 6 6 C 1.38230 * 120.00057 * 179.97438 * 5 4 2 7 7 C 1.38233 * 119.99903 * 0.02562 * 6 5 4 8 8 C 1.50702 * 119.99913 * 179.97438 * 7 6 5 9 9 C 1.50701 * 109.46965 * 90.00270 * 8 7 6 10 10 O 1.21277 * 120.00099 * 359.97438 * 9 8 7 11 11 N 1.34778 * 119.99998 * 180.02562 * 9 8 7 12 12 C 1.46500 * 119.99919 * 180.02562 * 11 9 8 13 13 H 1.09002 * 112.85132 * 25.33083 * 12 11 9 14 14 C 1.53781 * 113.61711 * 156.52821 * 12 11 9 15 15 C 1.53785 * 87.08277 * 89.19510 * 14 12 11 16 16 H 1.08995 * 113.61449 * 270.88726 * 15 14 12 17 17 C 1.50693 * 113.61331 * 140.06613 * 15 14 12 18 18 C 1.38249 * 119.99201 * 299.72772 * 17 15 14 19 19 C 1.38209 * 120.01083 * 179.76717 * 18 17 15 20 20 C 1.38330 * 119.99126 * 0.51120 * 19 18 17 21 21 Br 1.89100 * 120.01170 * 179.77138 * 20 19 18 22 22 C 1.38326 * 119.97963 * 359.74070 * 20 19 18 23 23 C 1.38220 * 119.98817 * 0.02562 * 22 20 19 24 24 C 1.53776 * 87.07661 * 25.43397 * 15 14 12 25 25 C 1.38238 * 120.00281 * 0.25423 * 7 6 5 26 26 C 1.38231 * 119.99908 * 245.02212 * 4 2 1 27 27 H 0.96703 * 113.99891 * 60.00081 * 1 2 3 28 28 H 1.09004 * 109.46894 * 239.99488 * 2 1 3 29 29 H 1.48498 * 109.99835 * 298.67704 * 3 2 1 30 30 H 1.48494 * 110.00016 * 59.99877 * 3 2 1 31 31 H 1.08002 * 119.99546 * 0.02562 * 5 4 2 32 32 H 1.07994 * 120.00352 * 179.97438 * 6 5 4 33 33 H 1.08998 * 109.47660 * 330.00305 * 8 7 6 34 34 H 1.09005 * 109.47245 * 209.99576 * 8 7 6 35 35 H 0.96998 * 120.00229 * 359.97438 * 11 9 8 36 36 H 1.08993 * 113.62030 * 203.74957 * 14 12 11 37 37 H 1.09006 * 113.61109 * 334.56882 * 14 12 11 38 38 H 1.07997 * 119.98911 * 0.02562 * 18 17 15 39 39 H 1.07999 * 120.00586 * 180.27597 * 19 18 17 40 40 H 1.07994 * 120.00610 * 180.02562 * 22 20 19 41 41 H 1.07997 * 119.99260 * 180.02562 * 23 22 20 42 42 H 1.09003 * 113.61687 * 220.01420 * 24 15 14 43 43 H 1.09009 * 113.61565 * 89.11769 * 24 15 14 44 44 H 1.07994 * 120.00286 * 179.72791 * 25 7 6 45 45 H 1.07994 * 120.00168 * 0.02562 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6847 -2.0602 1.3984 6 6 2.1459 -2.7120 2.5268 7 6 2.8533 -2.0139 3.4876 8 6 3.3556 -2.7243 4.7181 9 6 4.7371 -3.2665 4.4563 10 8 5.2619 -3.0935 3.3767 11 7 5.3890 -3.9445 5.4215 12 6 6.7322 -4.4711 5.1672 13 1 7.2649 -3.9167 4.3945 14 6 7.5582 -4.6952 6.4448 15 6 6.9567 -6.1097 6.4914 16 1 6.0183 -6.1672 7.0427 17 6 7.9433 -7.1719 6.9031 18 6 9.0800 -7.3896 6.1469 19 6 9.9874 -8.3604 6.5267 20 6 9.7530 -9.1215 7.6578 21 35 10.9910 -10.4542 8.1744 22 6 8.6129 -8.9069 8.4112 23 6 7.7083 -7.9325 8.0333 24 6 6.7709 -5.9956 4.9692 25 6 3.0950 -0.6628 3.3225 26 6 2.6383 -0.0122 2.1915 27 1 -0.3933 0.4417 -0.7651 28 1 1.7924 -0.5139 -0.8900 29 1 1.5880 2.4584 -1.2243 30 1 1.5615 2.4678 1.2084 31 1 1.1323 -2.6057 0.6475 32 1 1.9528 -3.7664 2.6582 33 1 2.6831 -3.5464 4.9631 34 1 3.3923 -2.0239 5.5525 35 1 4.9691 -4.0832 6.2849 36 1 8.6350 -4.6838 6.2763 37 1 7.2536 -4.0621 7.2783 38 1 9.2609 -6.7982 5.2616 39 1 10.8776 -8.5274 5.9385 40 1 8.4296 -9.5005 9.2946 41 1 6.8184 -7.7646 8.6217 42 1 5.8298 -6.4135 4.6116 43 1 7.6326 -6.3399 4.3971 44 1 3.6438 -0.1165 4.0752 45 1 2.8303 1.0425 2.0607 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_12335836.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:11:14 Heat of formation + Delta-G solvation = 17.932368 kcal Electronic energy + Delta-G solvation = -27274.029844 eV Core-core repulsion = 23269.892455 eV Total energy + Delta-G solvation = -4004.137390 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 402.062 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -41.62548 -40.81599 -40.01594 -38.78986 -37.73791 -34.67092 -34.10271 -32.96377 -32.03061 -31.93084 -30.50439 -29.59978 -26.67169 -26.24614 -25.30590 -23.88070 -23.80994 -22.59709 -22.12127 -21.30803 -20.09109 -18.58130 -18.38322 -17.71973 -17.56521 -16.98362 -16.86577 -16.50368 -16.15999 -16.13019 -15.93005 -15.29045 -15.17358 -15.08303 -14.61976 -14.59202 -14.46910 -14.35080 -14.24480 -13.97684 -13.57209 -13.49858 -13.41471 -13.03735 -12.89458 -12.83970 -12.39080 -12.24513 -12.02083 -11.94568 -11.83072 -11.72532 -11.39453 -11.28046 -11.18582 -10.94382 -10.50964 -10.04527 -9.98280 -9.86332 -9.59929 -9.49945 -4.94327 0.06318 0.24595 0.32980 0.46769 0.66091 1.27644 1.56265 1.66937 1.89757 2.16580 2.57402 2.75651 3.40267 3.49315 3.65871 3.67550 3.72602 3.84776 3.86316 3.91639 3.95858 3.98849 4.05549 4.08343 4.22866 4.31424 4.36846 4.43085 4.46851 4.49867 4.63640 4.68491 4.72503 4.73312 4.80253 4.89567 4.92889 5.03648 5.04955 5.07258 5.09815 5.18731 5.24559 5.26789 5.38894 5.54956 5.55403 5.59505 5.69841 5.84963 6.02496 6.56325 6.60187 7.32132 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.087 4.087 3 Si 0.760 3.240 4 C -0.091 4.091 5 C -0.109 4.109 6 C -0.116 4.116 7 C -0.072 4.072 8 C -0.098 4.098 9 C 0.517 3.483 10 O -0.576 6.576 11 N -0.702 5.702 12 C 0.117 3.883 13 H 0.082 0.918 14 C -0.124 4.124 15 C -0.066 4.066 16 H 0.118 0.882 17 C -0.057 4.057 18 C -0.115 4.115 19 C -0.100 4.100 20 C -0.111 4.111 21 Br -0.064 7.064 22 C -0.100 4.100 23 C -0.112 4.112 24 C -0.144 4.144 25 C -0.110 4.110 26 C -0.127 4.127 27 H 0.394 0.606 28 H 0.089 0.911 29 H -0.283 1.283 30 H -0.295 1.295 31 H 0.124 0.876 32 H 0.134 0.866 33 H 0.129 0.871 34 H 0.133 0.867 35 H 0.418 0.582 36 H 0.098 0.902 37 H 0.091 0.909 38 H 0.145 0.855 39 H 0.136 0.864 40 H 0.139 0.861 41 H 0.152 0.848 42 H 0.068 0.932 43 H 0.094 0.906 44 H 0.143 0.857 45 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.514 0.837 3.461 3.597 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.367 6.367 2 C -0.196 4.196 3 Si 0.665 3.335 4 C -0.091 4.091 5 C -0.127 4.127 6 C -0.134 4.134 7 C -0.072 4.072 8 C -0.137 4.137 9 C 0.304 3.696 10 O -0.455 6.455 11 N -0.354 5.354 12 C 0.011 3.989 13 H 0.100 0.900 14 C -0.162 4.162 15 C -0.084 4.084 16 H 0.136 0.864 17 C -0.057 4.057 18 C -0.134 4.134 19 C -0.120 4.120 20 C -0.190 4.190 21 Br 0.021 6.979 22 C -0.119 4.119 23 C -0.131 4.131 24 C -0.183 4.183 25 C -0.128 4.128 26 C -0.145 4.145 27 H 0.244 0.756 28 H 0.107 0.893 29 H -0.210 1.210 30 H -0.222 1.222 31 H 0.142 0.858 32 H 0.152 0.848 33 H 0.147 0.853 34 H 0.151 0.849 35 H 0.255 0.745 36 H 0.116 0.884 37 H 0.109 0.891 38 H 0.163 0.837 39 H 0.154 0.846 40 H 0.156 0.844 41 H 0.170 0.830 42 H 0.086 0.914 43 H 0.112 0.888 44 H 0.161 0.839 45 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 0.214 0.971 3.438 3.578 hybrid contribution -1.424 -0.210 -0.504 1.525 sum -1.210 0.760 2.933 3.263 Atomic orbital electron populations 1.86543 1.18511 1.80721 1.50962 1.25022 0.84038 1.11991 0.98526 0.94022 0.90643 0.72248 0.76584 1.19486 0.99259 0.94514 0.95878 1.21114 0.99190 0.94193 0.98210 1.21244 0.98004 1.00346 0.93770 1.19598 0.97505 0.93902 0.96242 1.20754 0.92849 1.02786 0.97309 1.20956 0.87938 0.77054 0.83625 1.90746 1.69436 1.59155 1.26142 1.45579 1.16935 1.55850 1.17068 1.21780 0.83777 0.94409 0.98962 0.90012 1.23357 1.00468 0.95179 0.97188 1.21649 0.97800 0.92422 0.96520 0.86388 1.20045 0.95147 0.96181 0.94318 1.21247 0.93747 0.97837 1.00557 1.21292 1.00334 0.95201 0.95131 1.21981 0.97229 0.99288 1.00485 1.96753 1.58134 1.51271 1.91718 1.21336 0.92631 0.98459 0.99504 1.21360 0.99868 0.94846 0.96985 1.23555 1.03038 0.95873 0.95792 1.21217 0.99248 0.94432 0.97907 1.21150 0.99111 1.00017 0.94183 0.75595 0.89334 1.21044 1.22221 0.85763 0.84771 0.85276 0.84930 0.74451 0.88402 0.89062 0.83740 0.84573 0.84351 0.82987 0.91365 0.88810 0.83903 0.84653 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.58 12.81 -148.98 -1.91 -4.49 16 2 C -0.09 -0.23 2.79 71.24 0.20 -0.03 16 3 Si 0.76 0.40 29.85 68.60 2.05 2.45 16 4 C -0.09 -0.54 5.38 -19.86 -0.11 -0.64 16 5 C -0.11 -0.66 9.69 22.27 0.22 -0.44 16 6 C -0.12 -0.44 9.70 22.27 0.22 -0.23 16 7 C -0.07 -0.14 4.37 -19.87 -0.09 -0.23 16 8 C -0.10 0.53 5.83 29.10 0.17 0.70 16 9 C 0.52 -0.12 7.82 87.66 0.69 0.57 16 10 O -0.58 -5.90 15.65 -3.02 -0.05 -5.94 16 11 N -0.70 4.35 5.27 -440.04 -2.32 2.03 16 12 C 0.12 -0.50 4.30 45.52 0.20 -0.30 16 13 H 0.08 0.09 7.50 -2.39 -0.02 0.07 16 14 C -0.12 0.99 7.29 31.12 0.23 1.22 16 15 C -0.07 0.51 3.86 -11.02 -0.04 0.47 16 16 H 0.12 -1.30 8.09 -2.39 -0.02 -1.32 16 17 C -0.06 0.22 5.29 -19.86 -0.11 0.12 16 18 C -0.12 0.28 8.63 22.27 0.19 0.47 16 19 C -0.10 -0.04 9.79 22.28 0.22 0.18 16 20 C -0.11 -0.22 6.22 22.31 0.14 -0.08 16 21 Br -0.06 -0.21 33.70 -20.37 -0.69 -0.90 16 22 C -0.10 0.03 9.79 22.29 0.22 0.25 16 23 C -0.11 0.39 9.71 22.27 0.22 0.61 16 24 C -0.14 0.69 7.26 31.12 0.23 0.92 16 25 C -0.11 -0.29 9.70 22.27 0.22 -0.07 16 26 C -0.13 -0.55 8.67 22.27 0.19 -0.35 16 27 H 0.39 -1.45 8.74 -74.06 -0.65 -2.09 16 28 H 0.09 -0.05 7.96 -2.38 -0.02 -0.07 16 29 H -0.28 -1.12 7.11 99.48 0.71 -0.42 16 30 H -0.29 -2.05 7.05 99.48 0.70 -1.35 16 31 H 0.12 0.57 8.06 -2.91 -0.02 0.54 16 32 H 0.13 0.02 8.06 -2.91 -0.02 -0.01 16 33 H 0.13 -1.32 8.09 -2.39 -0.02 -1.34 16 34 H 0.13 -1.44 8.08 -2.38 -0.02 -1.45 16 35 H 0.42 -5.37 8.71 -92.71 -0.81 -6.18 16 36 H 0.10 -0.71 7.73 -2.39 -0.02 -0.73 16 37 H 0.09 -0.91 8.14 -2.38 -0.02 -0.93 16 38 H 0.14 -0.80 6.65 -2.91 -0.02 -0.82 16 39 H 0.14 -0.17 8.06 -2.91 -0.02 -0.19 16 40 H 0.14 -0.32 8.06 -2.91 -0.02 -0.34 16 41 H 0.15 -1.26 8.05 -2.91 -0.02 -1.28 16 42 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 43 H 0.09 -0.42 6.31 -2.38 -0.02 -0.43 16 44 H 0.14 -0.30 8.06 -2.91 -0.02 -0.32 16 45 H 0.14 0.14 4.87 -2.91 -0.01 0.12 16 Total: 0.00 -22.37 394.89 -0.12 -22.48 By element: Atomic # 1 Polarization: -18.36 SS G_CDS: -0.39 Total: -18.74 kcal Atomic # 6 Polarization: -0.06 SS G_CDS: 3.19 Total: 3.12 kcal Atomic # 7 Polarization: 4.35 SS G_CDS: -2.32 Total: 2.03 kcal Atomic # 8 Polarization: -8.48 SS G_CDS: -1.96 Total: -10.44 kcal Atomic # 14 Polarization: 0.40 SS G_CDS: 2.05 Total: 2.45 kcal Atomic # 35 Polarization: -0.21 SS G_CDS: -0.69 Total: -0.90 kcal Total: -22.37 -0.12 -22.48 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_12335836.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 40.417 kcal (2) G-P(sol) polarization free energy of solvation -22.369 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 18.048 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.115 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.485 kcal (6) G-S(sol) free energy of system = (1) + (5) 17.932 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds