Wall clock time and date at job start Sat Mar 6 2021 11:11:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86295 * 109.47173 * 2 1 4 4 C 1.50704 * 109.47537 * 119.99991 * 2 1 3 5 5 C 1.34454 * 126.48284 * 255.04823 * 4 2 1 6 6 N 1.36569 * 109.98189 * 179.97438 * 5 4 2 7 7 C 1.37824 * 109.86047 * 359.97438 * 6 5 4 8 8 C 1.38654 * 133.37801 * 180.35159 * 7 6 5 9 9 C 1.39314 * 119.66326 * 180.17593 * 8 7 6 10 10 C 1.47579 * 119.83052 * 179.72877 * 9 8 7 11 11 O 1.21593 * 119.99882 * 359.73316 * 10 9 8 12 12 N 1.34777 * 119.99797 * 180.02562 * 10 9 8 13 13 C 1.46505 * 119.99724 * 179.72717 * 12 10 9 14 14 H 1.09006 * 112.84949 * 336.19785 * 13 12 10 15 15 C 1.53774 * 113.61597 * 107.50390 * 13 12 10 16 16 C 1.53786 * 87.08098 * 89.11511 * 15 13 12 17 17 H 1.08997 * 113.69343 * 270.87341 * 16 15 13 18 18 C 1.50698 * 113.61411 * 139.98016 * 16 15 13 19 19 C 1.38244 * 119.98945 * 322.23292 * 18 16 15 20 20 C 1.38226 * 120.00735 * 179.72578 * 19 18 16 21 21 C 1.38326 * 119.98981 * 0.54272 * 20 19 18 22 22 Br 1.89099 * 120.01106 * 179.70495 * 21 20 19 23 23 C 1.38334 * 119.97956 * 359.72964 * 21 20 19 24 24 C 1.38222 * 119.98896 * 359.97438 * 23 21 20 25 25 C 1.53780 * 113.61431 * 205.00632 * 13 12 10 26 26 C 1.40201 * 120.34074 * 359.46360 * 9 8 7 27 27 C 1.36241 * 120.37419 * 0.24261 * 26 9 8 28 28 C 1.39870 * 119.95973 * 0.02623 * 27 26 9 29 29 H 0.96699 * 114.00484 * 59.99781 * 1 2 3 30 30 H 1.09001 * 109.46830 * 240.00049 * 2 1 3 31 31 H 1.48508 * 110.00082 * 298.68276 * 3 2 1 32 32 H 1.48503 * 110.00254 * 60.00212 * 3 2 1 33 33 H 1.07999 * 125.00650 * 359.95350 * 5 4 2 34 34 H 0.96998 * 125.06477 * 179.97438 * 6 5 4 35 35 H 1.08000 * 120.16522 * 359.91669 * 8 7 6 36 36 H 0.96990 * 120.00491 * 359.73145 * 12 10 9 37 37 H 1.09001 * 113.61556 * 203.66413 * 15 13 12 38 38 H 1.09001 * 113.61597 * 334.57149 * 15 13 12 39 39 H 1.07988 * 119.99705 * 359.97438 * 19 18 16 40 40 H 1.07990 * 120.00362 * 180.29799 * 20 19 18 41 41 H 1.07994 * 120.00231 * 180.02562 * 23 21 20 42 42 H 1.07993 * 119.99353 * 179.97438 * 24 23 21 43 43 H 1.09002 * 113.61835 * 25.42776 * 25 13 12 44 44 H 1.08996 * 113.61604 * 156.25110 * 25 13 12 45 45 H 1.07993 * 119.81463 * 180.26795 * 26 9 8 46 46 H 1.08000 * 120.01713 * 180.02562 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.4609 -0.1362 2.3249 6 7 2.8026 -1.0947 3.2358 7 6 2.4940 -2.3431 2.7399 8 6 2.6247 -3.6275 3.2455 9 6 2.2123 -4.7154 2.4792 10 6 2.3553 -6.0845 3.0112 11 8 2.8365 -6.2611 4.1138 12 7 1.9579 -7.1394 2.2725 13 6 2.1053 -8.4989 2.7982 14 1 2.8838 -8.5771 3.5573 15 6 0.7735 -9.1480 3.2101 16 6 0.6671 -9.6614 1.7644 17 1 0.1642 -8.9688 1.0895 18 6 0.1368 -11.0682 1.6608 19 6 0.5036 -12.0156 2.5984 20 6 0.0129 -13.3046 2.5070 21 6 -0.8363 -13.6494 1.4710 22 35 -1.5012 -15.4148 1.3407 23 6 -1.1985 -12.7025 0.5298 24 6 -0.7122 -11.4121 0.6255 25 6 2.2014 -9.5754 1.7043 26 6 1.6570 -4.5159 1.2074 27 6 1.5194 -3.2568 0.7055 28 6 1.9339 -2.1548 1.4605 29 1 -0.3934 0.4417 -0.7650 30 1 1.7923 -0.5138 -0.8900 31 1 1.5878 2.4586 -1.2243 32 1 1.5615 2.4679 1.2085 33 1 2.5964 0.9263 2.4631 34 1 3.2028 -0.9224 4.1024 35 1 3.0480 -3.7841 4.2267 36 1 1.5744 -6.9987 1.3928 37 1 0.8847 -9.9421 3.9484 38 1 0.0001 -8.4272 3.4754 39 1 1.1703 -11.7476 3.4045 40 1 0.2956 -14.0434 3.2422 41 1 -1.8617 -12.9711 -0.2790 42 1 -0.9946 -10.6729 -0.1094 43 1 2.5807 -9.1997 0.7540 44 1 2.7041 -10.4858 2.0305 45 1 1.3362 -5.3651 0.6224 46 1 1.0905 -3.1098 -0.2747 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_12335838.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:11:19 Heat of formation + Delta-G solvation = 57.079018 kcal Electronic energy + Delta-G solvation = -30414.709918 eV Core-core repulsion = 26090.391862 eV Total energy + Delta-G solvation = -4324.318055 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 427.057 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -42.45400 -41.60913 -40.47116 -38.93880 -37.87290 -37.50304 -34.77408 -33.35468 -33.05080 -32.03131 -30.85549 -30.73516 -30.05048 -26.69299 -26.53785 -26.05909 -24.64300 -23.80290 -23.63077 -22.38585 -21.61927 -20.59748 -20.14457 -19.30973 -18.43427 -18.30850 -17.88183 -17.31377 -17.05214 -16.56205 -16.20867 -16.06471 -15.86943 -15.78720 -15.37061 -15.16180 -14.99488 -14.93911 -14.75415 -14.63759 -14.47976 -14.42797 -14.22454 -13.84202 -13.50779 -13.42818 -13.15365 -12.90052 -12.64622 -12.59589 -12.39094 -12.17833 -12.04750 -11.86913 -11.84235 -11.40818 -11.28173 -11.20724 -11.11741 -10.76538 -10.32439 -10.14749 -9.99739 -9.50350 -9.35401 -8.79040 -4.84586 -0.31590 0.06311 0.33130 0.38867 0.66022 1.35890 1.40056 1.66065 1.87497 1.90122 2.01999 2.24171 2.57268 2.87143 3.45424 3.56892 3.59386 3.66109 3.71741 3.73963 3.83624 3.84416 3.96047 3.97406 4.05526 4.11367 4.21284 4.30136 4.36895 4.38520 4.42686 4.51962 4.59699 4.65570 4.72153 4.78768 4.79135 4.87942 4.90605 4.98958 5.03294 5.05833 5.14569 5.23033 5.24464 5.25416 5.42305 5.47792 5.54577 5.62238 5.66043 5.84814 5.98979 6.47499 6.52427 6.71334 7.14983 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.562 6.562 2 C -0.049 4.049 3 Si 0.767 3.233 4 C -0.190 4.190 5 C 0.087 3.913 6 N -0.577 5.577 7 C 0.067 3.933 8 C -0.067 4.067 9 C -0.136 4.136 10 C 0.565 3.435 11 O -0.581 6.581 12 N -0.693 5.693 13 C 0.114 3.886 14 H 0.087 0.913 15 C -0.144 4.144 16 C -0.067 4.067 17 H 0.117 0.883 18 C -0.056 4.056 19 C -0.115 4.115 20 C -0.099 4.099 21 C -0.110 4.110 22 Br -0.064 7.064 23 C -0.099 4.099 24 C -0.112 4.112 25 C -0.123 4.123 26 C -0.106 4.106 27 C -0.082 4.082 28 C -0.081 4.081 29 H 0.391 0.609 30 H 0.085 0.915 31 H -0.290 1.290 32 H -0.287 1.287 33 H 0.202 0.798 34 H 0.434 0.566 35 H 0.129 0.871 36 H 0.415 0.585 37 H 0.099 0.901 38 H 0.067 0.933 39 H 0.146 0.854 40 H 0.137 0.863 41 H 0.139 0.861 42 H 0.152 0.848 43 H 0.091 0.909 44 H 0.103 0.897 45 H 0.156 0.844 46 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.450 4.455 -4.826 7.009 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.372 6.372 2 C -0.158 4.158 3 Si 0.672 3.328 4 C -0.197 4.197 5 C -0.042 4.042 6 N -0.181 5.181 7 C -0.040 4.040 8 C -0.088 4.088 9 C -0.140 4.140 10 C 0.354 3.646 11 O -0.462 6.462 12 N -0.345 5.345 13 C 0.008 3.992 14 H 0.105 0.895 15 C -0.182 4.182 16 C -0.085 4.085 17 H 0.135 0.865 18 C -0.056 4.056 19 C -0.133 4.133 20 C -0.119 4.119 21 C -0.190 4.190 22 Br 0.021 6.979 23 C -0.119 4.119 24 C -0.131 4.131 25 C -0.161 4.161 26 C -0.125 4.125 27 C -0.100 4.100 28 C -0.087 4.087 29 H 0.241 0.759 30 H 0.103 0.897 31 H -0.217 1.217 32 H -0.214 1.214 33 H 0.219 0.781 34 H 0.275 0.725 35 H 0.146 0.854 36 H 0.254 0.746 37 H 0.117 0.883 38 H 0.086 0.914 39 H 0.164 0.836 40 H 0.155 0.845 41 H 0.157 0.843 42 H 0.169 0.831 43 H 0.109 0.891 44 H 0.121 0.879 45 H 0.173 0.827 46 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 2.484 4.188 -3.434 5.958 hybrid contribution -1.186 0.143 -0.164 1.206 sum 1.298 4.331 -3.597 5.778 Atomic orbital electron populations 1.86592 1.19246 1.80587 1.50740 1.24296 0.83310 1.11194 0.97014 0.94230 0.90070 0.71528 0.77019 1.19803 1.10619 0.91167 0.98107 1.22196 0.98350 0.95425 0.88227 1.41766 1.54328 1.03344 1.18641 1.18144 1.03955 0.86796 0.95120 1.20131 0.99930 0.88718 1.00047 1.19459 1.06192 0.91660 0.96730 1.18345 0.76703 0.85366 0.84167 1.90769 1.46646 1.86746 1.22065 1.45439 1.63269 1.04790 1.21019 1.21889 0.98560 0.80856 0.97884 0.89454 1.23575 0.97391 1.00477 0.96760 1.21657 0.96394 0.92403 0.98052 0.86527 1.20012 0.95720 0.95677 0.94215 1.21251 1.00320 0.91959 0.99794 1.21295 0.95975 0.97754 0.96892 1.21982 1.04081 0.91844 1.01054 1.96751 1.86588 1.16127 1.98384 1.21331 0.99547 0.92991 0.98023 1.21356 0.97084 0.95924 0.98710 1.23380 0.94888 0.98481 0.99345 1.20915 0.99488 0.98131 0.94007 1.20415 0.98865 0.90499 1.00233 1.19565 1.01032 0.94074 0.93990 0.75923 0.89691 1.21711 1.21443 0.78098 0.72539 0.85358 0.74591 0.88273 0.91443 0.83615 0.84512 0.84341 0.83050 0.89071 0.87875 0.82694 0.83939 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.92 12.86 -148.98 -1.92 -2.84 16 2 C -0.05 0.08 3.05 71.24 0.22 0.30 16 3 Si 0.77 -3.55 30.79 68.60 2.11 -1.44 16 4 C -0.19 -0.30 5.60 -18.64 -0.10 -0.41 16 5 C 0.09 -0.17 10.43 83.09 0.87 0.70 16 6 N -0.58 0.75 6.07 -187.71 -1.14 -0.39 16 7 C 0.07 0.27 7.26 38.96 0.28 0.55 16 8 C -0.07 -0.37 9.61 22.63 0.22 -0.16 16 9 C -0.14 -0.57 5.87 -20.08 -0.12 -0.69 16 10 C 0.57 3.40 7.76 86.71 0.67 4.07 16 11 O -0.58 -8.31 15.91 -4.01 -0.06 -8.37 16 12 N -0.69 1.01 5.21 -443.14 -2.31 -1.30 16 13 C 0.11 -0.21 4.32 45.51 0.20 -0.01 16 14 H 0.09 0.24 7.46 -2.38 -0.02 0.22 16 15 C -0.14 0.45 7.25 31.12 0.23 0.68 16 16 C -0.07 0.42 3.86 -11.01 -0.04 0.37 16 17 H 0.12 -1.07 8.09 -2.39 -0.02 -1.09 16 18 C -0.06 0.17 5.29 -19.86 -0.11 0.06 16 19 C -0.11 0.21 8.60 22.27 0.19 0.40 16 20 C -0.10 -0.08 9.79 22.29 0.22 0.13 16 21 C -0.11 -0.28 6.22 22.31 0.14 -0.14 16 22 Br -0.06 -0.24 33.70 -20.37 -0.69 -0.92 16 23 C -0.10 -0.03 9.79 22.29 0.22 0.19 16 24 C -0.11 0.29 9.71 22.27 0.22 0.51 16 25 C -0.12 0.79 7.29 31.12 0.23 1.02 16 26 C -0.11 0.06 9.46 22.28 0.21 0.28 16 27 C -0.08 -0.10 10.03 22.20 0.22 0.12 16 28 C -0.08 -0.34 6.35 -20.14 -0.13 -0.47 16 29 H 0.39 -2.49 8.74 -74.06 -0.65 -3.14 16 30 H 0.09 -0.39 7.96 -2.39 -0.02 -0.41 16 31 H -0.29 -0.11 7.11 99.48 0.71 0.60 16 32 H -0.29 -0.22 7.04 99.48 0.70 0.48 16 33 H 0.20 -1.63 6.30 -2.91 -0.02 -1.65 16 34 H 0.43 -3.04 8.96 -92.71 -0.83 -3.87 16 35 H 0.13 0.79 7.62 -2.91 -0.02 0.77 16 36 H 0.42 -3.14 6.69 -92.72 -0.62 -3.76 16 37 H 0.10 -0.36 6.32 -2.39 -0.02 -0.38 16 38 H 0.07 -0.05 8.14 -2.39 -0.02 -0.07 16 39 H 0.15 -0.75 6.67 -2.92 -0.02 -0.77 16 40 H 0.14 -0.12 8.06 -2.92 -0.02 -0.14 16 41 H 0.14 -0.23 8.06 -2.91 -0.02 -0.25 16 42 H 0.15 -1.10 8.05 -2.91 -0.02 -1.12 16 43 H 0.09 -0.75 8.14 -2.39 -0.02 -0.77 16 44 H 0.10 -0.67 7.72 -2.39 -0.02 -0.69 16 45 H 0.16 -1.23 6.36 -2.91 -0.02 -1.25 16 46 H 0.14 -0.32 8.06 -2.91 -0.02 -0.34 16 Total: 0.00 -24.23 403.65 -1.17 -25.39 By element: Atomic # 1 Polarization: -16.64 SS G_CDS: -0.99 Total: -17.64 kcal Atomic # 6 Polarization: 3.67 SS G_CDS: 3.82 Total: 7.49 kcal Atomic # 7 Polarization: 1.76 SS G_CDS: -3.45 Total: -1.69 kcal Atomic # 8 Polarization: -9.23 SS G_CDS: -1.98 Total: -11.21 kcal Atomic # 14 Polarization: -3.55 SS G_CDS: 2.11 Total: -1.44 kcal Atomic # 35 Polarization: -0.24 SS G_CDS: -0.69 Total: -0.92 kcal Total: -24.23 -1.17 -25.39 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_12335838.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 82.472 kcal (2) G-P(sol) polarization free energy of solvation -24.225 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 58.247 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.168 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.393 kcal (6) G-S(sol) free energy of system = (1) + (5) 57.079 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds