Wall clock time and date at job start Sat Mar 6 2021 11:11:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50699 * 109.46830 * 240.00466 * 2 1 3 5 5 C 1.37946 * 119.92427 * 299.72724 * 4 2 1 6 6 C 1.39599 * 119.87460 * 179.70573 * 5 4 2 7 7 C 1.47842 * 120.13830 * 180.26491 * 6 5 4 8 8 O 1.21551 * 120.00202 * 0.30077 * 7 6 5 9 9 N 1.34781 * 120.00038 * 180.29539 * 7 6 5 10 10 C 1.46498 * 120.00206 * 180.02562 * 9 7 6 11 11 H 1.08999 * 112.84956 * 23.80908 * 10 9 7 12 12 C 1.53783 * 113.61412 * 155.00030 * 10 9 7 13 13 C 1.53780 * 87.07820 * 89.11714 * 12 10 9 14 14 H 1.08996 * 113.61768 * 270.88113 * 13 12 10 15 15 C 1.50708 * 113.61289 * 140.06438 * 13 12 10 16 16 C 1.38241 * 119.98629 * 299.72587 * 15 13 12 17 17 C 1.38226 * 120.00507 * 179.76428 * 16 15 13 18 18 C 1.38321 * 119.98991 * 0.51070 * 17 16 15 19 19 Br 1.89104 * 120.01031 * 179.76419 * 18 17 16 20 20 C 1.38325 * 119.98069 * 359.74501 * 18 17 16 21 21 C 1.38218 * 119.99056 * 359.97438 * 20 18 17 22 22 C 1.53769 * 113.61786 * 252.50146 * 10 9 7 23 23 C 1.39539 * 119.71927 * 0.56731 * 6 5 4 24 24 C 1.38075 * 119.84330 * 359.72357 * 23 6 5 25 25 Br 1.89102 * 119.93757 * 180.02562 * 24 23 6 26 26 C 1.38360 * 119.92208 * 119.99627 * 4 2 1 27 27 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 28 28 H 1.08991 * 109.47274 * 120.00272 * 2 1 3 29 29 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 30 30 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 31 31 H 1.07994 * 120.05923 * 359.97438 * 5 4 2 32 32 H 0.97003 * 119.99681 * 0.02562 * 9 7 6 33 33 H 1.09001 * 113.61530 * 203.66806 * 12 10 9 34 34 H 1.09005 * 113.61371 * 334.48927 * 12 10 9 35 35 H 1.07993 * 119.99793 * 0.02562 * 16 15 13 36 36 H 1.08000 * 120.00156 * 180.27810 * 17 16 15 37 37 H 1.08000 * 120.00957 * 180.02562 * 20 18 17 38 38 H 1.08001 * 119.99487 * 180.02562 * 21 20 18 39 39 H 1.08999 * 113.61802 * 25.43182 * 22 10 9 40 40 H 1.09004 * 113.61968 * 156.33813 * 22 10 9 41 41 H 1.08002 * 120.08313 * 179.70659 * 23 6 5 42 42 H 1.08004 * 119.86004 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.6017 -2.0326 -1.4445 6 6 2.0624 -2.6878 -2.5879 7 6 1.7078 -4.1032 -2.8260 8 8 1.0093 -4.6973 -2.0281 9 7 2.1591 -4.7348 -3.9278 10 6 1.8073 -6.1372 -4.1640 11 1 0.8920 -6.4358 -3.6531 12 6 1.8441 -6.5400 -5.6477 13 6 3.3257 -6.8922 -5.4341 14 1 4.0026 -6.0553 -5.6056 15 6 3.7563 -8.1485 -6.1466 16 6 3.1494 -9.3543 -5.8487 17 6 3.5406 -10.5060 -6.5053 18 6 4.5468 -10.4536 -7.4530 19 35 5.0872 -12.0300 -8.3469 20 6 5.1575 -9.2477 -7.7469 21 6 4.7616 -8.0956 -7.0939 22 6 2.9788 -7.1104 -3.9519 23 6 2.8642 -2.0031 -3.5018 24 6 3.1920 -0.6814 -3.2731 25 35 4.2778 0.2493 -4.5102 26 6 2.7265 -0.0363 -2.1402 27 1 -0.3934 0.4418 -0.7650 28 1 1.7923 -0.5138 0.8899 29 1 1.5616 2.4678 1.2086 30 1 3.5346 1.7703 -0.0322 31 1 0.9848 -2.5586 -0.7311 32 1 2.7168 -4.2608 -4.5643 33 1 1.2196 -7.4022 -5.8817 34 1 1.6864 -5.7053 -6.3308 35 1 2.3665 -9.3958 -5.1059 36 1 3.0633 -11.4472 -6.2758 37 1 5.9429 -9.2062 -8.4870 38 1 5.2381 -7.1540 -7.3237 39 1 3.7388 -6.7361 -3.2660 40 1 2.6647 -8.1286 -3.7223 41 1 3.2278 -2.5056 -4.3859 42 1 2.9849 0.9978 -1.9660 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_12335870.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:11:50 Heat of formation + Delta-G solvation = 28.250218 kcal Electronic energy + Delta-G solvation = -27773.744994 eV Core-core repulsion = 23585.774636 eV Total energy + Delta-G solvation = -4187.970358 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 465.957 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -41.89243 -41.04448 -40.00011 -38.80968 -37.67743 -34.97744 -33.60635 -33.39261 -32.56573 -32.02924 -30.45405 -30.31608 -27.06868 -26.71678 -26.40157 -24.99716 -23.83912 -22.81661 -22.41395 -21.68556 -20.22128 -19.18737 -18.13666 -17.81996 -17.55073 -17.23489 -16.70593 -16.42558 -16.31934 -16.13773 -16.06810 -15.68122 -15.23961 -15.16007 -14.96392 -14.64996 -14.50366 -14.34005 -14.25344 -14.13905 -13.50511 -13.44374 -13.27401 -13.02929 -12.91612 -12.40920 -12.20241 -12.07766 -11.96302 -11.94264 -11.87497 -11.46661 -11.42516 -11.28868 -11.23387 -11.20553 -10.59682 -10.34331 -10.10423 -10.00501 -9.90570 -9.51201 -5.05479 -0.52219 -0.16031 0.05469 0.32365 0.43703 0.65607 1.21224 1.50171 1.59144 1.88401 1.95957 2.45744 2.56529 3.26876 3.34133 3.43076 3.53981 3.64012 3.68565 3.80486 3.82735 3.87565 3.95043 3.95402 3.96388 4.19196 4.21506 4.28241 4.35933 4.41382 4.47922 4.61895 4.71051 4.75624 4.77423 4.82578 4.88355 4.92807 5.01049 5.04198 5.07642 5.12783 5.23756 5.23969 5.36472 5.46789 5.63222 5.84061 6.34970 6.71343 7.02756 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.075 4.075 3 Si 0.771 3.229 4 C -0.116 4.116 5 C -0.030 4.030 6 C -0.135 4.135 7 C 0.563 3.437 8 O -0.571 6.571 9 N -0.693 5.693 10 C 0.113 3.887 11 H 0.089 0.911 12 C -0.123 4.123 13 C -0.067 4.067 14 H 0.117 0.883 15 C -0.056 4.056 16 C -0.115 4.115 17 C -0.100 4.100 18 C -0.110 4.110 19 Br -0.064 7.064 20 C -0.099 4.099 21 C -0.112 4.112 22 C -0.143 4.143 23 C -0.043 4.043 24 C -0.099 4.099 25 Br -0.028 7.028 26 C -0.062 4.062 27 H 0.397 0.603 28 H 0.113 0.887 29 H -0.294 1.294 30 H -0.276 1.276 31 H 0.130 0.870 32 H 0.415 0.585 33 H 0.103 0.897 34 H 0.092 0.908 35 H 0.146 0.854 36 H 0.137 0.863 37 H 0.138 0.862 38 H 0.152 0.848 39 H 0.068 0.932 40 H 0.099 0.901 41 H 0.164 0.836 42 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.014 4.776 -4.431 6.594 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.361 6.361 2 C -0.184 4.184 3 Si 0.676 3.324 4 C -0.117 4.117 5 C -0.049 4.049 6 C -0.140 4.140 7 C 0.351 3.649 8 O -0.451 6.451 9 N -0.344 5.344 10 C 0.008 3.992 11 H 0.107 0.893 12 C -0.161 4.161 13 C -0.085 4.085 14 H 0.135 0.865 15 C -0.057 4.057 16 C -0.133 4.133 17 C -0.119 4.119 18 C -0.189 4.189 19 Br 0.021 6.979 20 C -0.119 4.119 21 C -0.130 4.130 22 C -0.182 4.182 23 C -0.063 4.063 24 C -0.178 4.178 25 Br 0.058 6.942 26 C -0.081 4.081 27 H 0.247 0.753 28 H 0.130 0.870 29 H -0.222 1.222 30 H -0.203 1.203 31 H 0.148 0.852 32 H 0.254 0.746 33 H 0.121 0.879 34 H 0.110 0.890 35 H 0.164 0.836 36 H 0.154 0.846 37 H 0.156 0.844 38 H 0.170 0.830 39 H 0.087 0.913 40 H 0.117 0.883 41 H 0.181 0.819 42 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 1.700 4.367 -3.744 5.998 hybrid contribution 0.021 -0.702 0.568 0.903 sum 1.721 3.665 -3.175 5.145 Atomic orbital electron populations 1.86513 1.16872 1.82136 1.50563 1.25241 0.85603 1.11007 0.96594 0.93846 0.78302 0.74774 0.85479 1.20328 0.99353 0.94333 0.97735 1.21249 0.94840 0.93555 0.95269 1.19851 1.02823 0.93675 0.97601 1.18324 0.79038 0.86244 0.81320 1.90808 1.39433 1.68181 1.46687 1.45467 1.52775 1.12388 1.23806 1.21908 0.98740 0.80337 0.98201 0.89278 1.23386 0.95337 1.02967 0.94437 1.21666 0.97355 0.95167 0.94347 0.86454 1.20007 0.95005 0.95022 0.95625 1.21252 1.00651 0.91416 1.00006 1.21296 0.95653 1.00139 0.94855 1.21982 1.02349 0.92655 1.01954 1.96756 1.90816 1.33105 1.77213 1.21331 0.99524 0.91158 0.99901 1.21356 0.97086 0.98682 0.95910 1.23574 0.98089 1.00473 0.96046 1.21461 0.93949 0.92371 0.98555 1.21741 1.02947 0.95877 0.97255 1.96868 1.65642 1.75312 1.56373 1.21386 0.94558 1.00455 0.91689 0.75278 0.86982 1.22176 1.20270 0.85199 0.74635 0.87888 0.88978 0.83614 0.84554 0.84366 0.83011 0.91279 0.88268 0.81896 0.82687 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.41 12.77 -148.98 -1.90 -1.49 16 2 C -0.07 0.16 2.82 71.24 0.20 0.36 16 3 Si 0.77 -3.21 29.78 68.60 2.04 -1.17 16 4 C -0.12 0.22 5.38 -19.90 -0.11 0.11 16 5 C -0.03 -0.05 9.16 22.53 0.21 0.16 16 6 C -0.14 0.03 5.87 -20.09 -0.12 -0.09 16 7 C 0.56 1.59 7.77 86.78 0.67 2.26 16 8 O -0.57 -6.75 15.95 -3.88 -0.06 -6.82 16 9 N -0.69 2.91 5.21 -442.93 -2.31 0.60 16 10 C 0.11 -0.44 4.32 45.51 0.20 -0.24 16 11 H 0.09 0.07 7.46 -2.39 -0.02 0.05 16 12 C -0.12 0.99 7.29 31.12 0.23 1.22 16 13 C -0.07 0.52 3.85 -11.01 -0.04 0.48 16 14 H 0.12 -1.29 8.09 -2.39 -0.02 -1.30 16 15 C -0.06 0.23 5.29 -19.86 -0.11 0.13 16 16 C -0.11 0.32 8.63 22.27 0.19 0.51 16 17 C -0.10 -0.01 9.79 22.29 0.22 0.21 16 18 C -0.11 -0.21 6.22 22.31 0.14 -0.07 16 19 Br -0.06 -0.21 33.70 -20.37 -0.69 -0.89 16 20 C -0.10 0.04 9.79 22.29 0.22 0.26 16 21 C -0.11 0.40 9.71 22.27 0.22 0.62 16 22 C -0.14 0.71 7.25 31.12 0.23 0.93 16 23 C -0.04 0.21 9.28 22.55 0.21 0.42 16 24 C -0.10 0.40 6.22 22.28 0.14 0.53 16 25 Br -0.03 0.12 33.69 -20.37 -0.69 -0.57 16 26 C -0.06 0.25 8.41 22.34 0.19 0.43 16 27 H 0.40 -3.63 8.70 -74.05 -0.64 -4.28 16 28 H 0.11 -0.08 7.96 -2.39 -0.02 -0.10 16 29 H -0.29 -1.06 7.11 99.48 0.71 -0.35 16 30 H -0.28 0.08 7.11 99.48 0.71 0.79 16 31 H 0.13 0.67 7.65 -2.91 -0.02 0.65 16 32 H 0.42 -4.32 6.74 -92.71 -0.62 -4.95 16 33 H 0.10 -0.81 7.73 -2.39 -0.02 -0.83 16 34 H 0.09 -0.91 8.14 -2.38 -0.02 -0.93 16 35 H 0.15 -0.89 6.65 -2.91 -0.02 -0.91 16 36 H 0.14 -0.20 8.06 -2.91 -0.02 -0.22 16 37 H 0.14 -0.32 8.06 -2.91 -0.02 -0.35 16 38 H 0.15 -1.26 8.05 -2.91 -0.02 -1.29 16 39 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 40 H 0.10 -0.51 6.31 -2.38 -0.02 -0.52 16 41 H 0.16 -1.77 6.41 -2.91 -0.02 -1.79 16 42 H 0.16 -1.12 4.86 -2.91 -0.01 -1.13 16 Total: 0.00 -18.92 391.38 -0.85 -19.77 By element: Atomic # 1 Polarization: -17.54 SS G_CDS: -0.13 Total: -17.67 kcal Atomic # 6 Polarization: 5.36 SS G_CDS: 2.88 Total: 8.24 kcal Atomic # 7 Polarization: 2.91 SS G_CDS: -2.31 Total: 0.60 kcal Atomic # 8 Polarization: -6.34 SS G_CDS: -1.96 Total: -8.31 kcal Atomic # 14 Polarization: -3.21 SS G_CDS: 2.04 Total: -1.17 kcal Atomic # 35 Polarization: -0.09 SS G_CDS: -1.37 Total: -1.46 kcal Total: -18.92 -0.85 -19.77 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_12335870.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 48.019 kcal (2) G-P(sol) polarization free energy of solvation -18.915 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 29.104 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.854 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.769 kcal (6) G-S(sol) free energy of system = (1) + (5) 28.250 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds