Wall clock time and date at job start Sat Mar 6 2021 11:12:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86298 * 109.46983 * 2 1 4 4 C 1.50700 * 109.47440 * 120.00139 * 2 1 3 5 5 C 1.38189 * 119.83892 * 15.00161 * 4 2 1 6 6 C 1.38307 * 120.14008 * 180.02562 * 5 4 2 7 7 F 1.35098 * 120.08198 * 179.97438 * 6 5 4 8 8 C 1.39812 * 119.83528 * 359.97263 * 6 5 4 9 9 C 1.47694 * 120.15488 * 179.97438 * 8 6 5 10 10 O 1.21573 * 120.00145 * 0.02562 * 9 8 6 11 11 N 1.34777 * 119.99918 * 180.02562 * 9 8 6 12 12 C 1.46498 * 119.99828 * 180.27859 * 11 9 8 13 13 H 1.09002 * 112.85447 * 23.52517 * 12 11 9 14 14 C 1.53782 * 113.61542 * 154.72141 * 12 11 9 15 15 C 1.53779 * 87.08038 * 89.11161 * 14 12 11 16 16 H 1.09002 * 113.61739 * 270.80215 * 15 14 12 17 17 C 1.50699 * 113.61459 * 139.97997 * 15 14 12 18 18 C 1.38243 * 119.99290 * 299.72806 * 17 15 14 19 19 C 1.38217 * 120.01479 * 179.76286 * 18 17 15 20 20 C 1.38329 * 119.98350 * 0.51201 * 19 18 17 21 21 Br 1.89101 * 120.00748 * 179.76725 * 20 19 18 22 22 C 1.38323 * 119.98348 * 359.74283 * 20 19 18 23 23 C 1.38220 * 119.98900 * 0.02562 * 22 20 19 24 24 C 1.53778 * 113.61220 * 252.21874 * 12 11 9 25 25 C 1.39649 * 119.68780 * 0.25610 * 8 6 5 26 26 C 1.38069 * 119.85261 * 359.51465 * 25 8 6 27 27 F 1.35102 * 119.92067 * 180.20734 * 26 25 8 28 28 H 0.96693 * 113.99432 * 299.99440 * 1 2 3 29 29 H 1.09002 * 109.46670 * 240.00476 * 2 1 3 30 30 H 1.48503 * 110.00405 * 300.00321 * 3 2 1 31 31 H 1.48498 * 109.99884 * 61.32084 * 3 2 1 32 32 H 1.07994 * 119.93098 * 359.97438 * 5 4 2 33 33 H 0.97001 * 119.99727 * 359.97438 * 11 9 8 34 34 H 1.08999 * 113.61850 * 203.66149 * 14 12 11 35 35 H 1.08997 * 113.61469 * 334.56635 * 14 12 11 36 36 H 1.08003 * 119.98974 * 0.02562 * 18 17 15 37 37 H 1.07997 * 120.00945 * 180.27339 * 19 18 17 38 38 H 1.08005 * 120.00588 * 180.02562 * 22 20 19 39 39 H 1.07993 * 119.99185 * 180.02562 * 23 22 20 40 40 H 1.08998 * 113.61637 * 25.42993 * 24 12 11 41 41 H 1.08999 * 113.61924 * 156.33648 * 24 12 11 42 42 H 1.08001 * 120.07329 * 179.74477 * 25 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.0691 -1.4963 1.9710 6 6 1.5234 -2.1506 3.1016 7 9 0.6792 -2.9182 3.8249 8 6 2.8586 -2.0158 3.4939 9 6 3.3511 -2.7110 4.7004 10 8 2.5952 -3.4028 5.3546 11 7 4.6386 -2.5784 5.0761 12 6 5.1287 -3.2729 6.2693 13 1 4.5305 -4.1472 6.5259 14 6 6.6416 -3.5473 6.2446 15 6 6.8225 -2.1709 6.9060 16 1 6.9224 -1.3531 6.1923 17 6 7.8861 -2.1492 7.9734 18 6 7.7684 -2.9654 9.0830 19 6 8.7461 -2.9494 10.0598 20 6 9.8371 -2.1087 9.9323 21 35 11.1718 -2.0816 11.2716 22 6 9.9519 -1.2883 8.8245 23 6 8.9761 -1.3085 7.8458 24 6 5.3975 -2.3372 7.4597 25 6 3.7227 -1.2161 2.7431 26 6 3.2567 -0.5725 1.6140 27 9 4.0926 0.1982 0.8843 28 1 -0.3932 0.4416 0.7651 29 1 1.7923 -0.5138 -0.8901 30 1 1.5614 2.4680 -1.2084 31 1 1.5879 2.4585 1.2242 32 1 0.0380 -1.5990 1.6667 33 1 5.2419 -2.0268 4.5539 34 1 6.9448 -4.3800 6.8792 35 1 7.0582 -3.6067 5.2391 36 1 6.9144 -3.6188 9.1844 37 1 8.6563 -3.5903 10.9244 38 1 10.8038 -0.6321 8.7243 39 1 9.0658 -0.6683 6.9807 40 1 4.8097 -1.4196 7.4352 41 1 5.3605 -2.8390 8.4266 42 1 4.7543 -1.1043 3.0429 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_12360598.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:12:04 Heat of formation + Delta-G solvation = -60.331760 kcal Electronic energy + Delta-G solvation = -30888.257001 eV Core-core repulsion = 26097.355492 eV Total energy + Delta-G solvation = -4790.901509 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 424.027 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -50.28831 -50.11363 -41.78532 -40.83195 -39.95698 -38.83699 -37.76247 -34.95853 -33.38719 -32.60136 -32.01082 -31.42598 -30.32434 -28.03487 -26.68931 -25.92384 -24.21000 -24.14043 -23.67144 -22.41685 -21.99238 -20.26105 -19.56105 -19.04879 -18.50443 -18.05975 -17.86340 -17.35339 -17.24433 -16.85994 -16.65637 -16.41866 -16.14584 -16.02783 -15.91796 -15.74634 -15.70095 -15.27682 -15.12792 -14.76526 -14.53265 -14.44252 -14.22221 -14.10559 -13.82812 -13.52934 -13.42382 -13.26915 -12.96947 -12.89612 -12.65368 -12.38469 -12.08566 -12.04599 -11.84746 -11.40347 -11.30192 -11.26660 -11.20474 -11.11225 -10.30301 -10.15109 -9.98705 -9.74215 -9.49127 -4.80556 -0.77834 -0.26870 0.07490 0.34467 0.67435 1.10164 1.46491 1.56577 1.83237 1.91011 2.28861 2.58541 2.77081 2.83765 3.11263 3.16626 3.43274 3.46722 3.52864 3.66850 3.71458 3.82907 3.84936 3.97131 3.97832 4.20377 4.24990 4.36284 4.38096 4.42339 4.44231 4.58496 4.67974 4.73253 4.75105 4.76324 4.79992 4.86606 4.90572 5.03838 5.06685 5.13649 5.25926 5.26055 5.40794 5.47479 5.65452 5.86411 6.33866 6.34633 7.02261 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.081 4.081 3 Si 0.749 3.251 4 C -0.089 4.089 5 C -0.128 4.128 6 C 0.135 3.865 7 F -0.130 7.130 8 C -0.159 4.159 9 C 0.561 3.439 10 O -0.565 6.565 11 N -0.687 5.687 12 C 0.113 3.887 13 H 0.086 0.914 14 C -0.123 4.123 15 C -0.066 4.066 16 H 0.123 0.877 17 C -0.056 4.056 18 C -0.116 4.116 19 C -0.101 4.101 20 C -0.111 4.111 21 Br -0.065 7.065 22 C -0.100 4.100 23 C -0.110 4.110 24 C -0.144 4.144 25 C -0.064 4.064 26 C 0.086 3.914 27 F -0.090 7.090 28 H 0.390 0.610 29 H 0.148 0.852 30 H -0.290 1.290 31 H -0.283 1.283 32 H 0.165 0.835 33 H 0.418 0.582 34 H 0.101 0.899 35 H 0.094 0.906 36 H 0.145 0.855 37 H 0.135 0.865 38 H 0.139 0.861 39 H 0.155 0.845 40 H 0.070 0.930 41 H 0.097 0.903 42 H 0.192 0.808 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.982 2.869 -3.818 6.902 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.189 4.189 3 Si 0.652 3.348 4 C -0.091 4.091 5 C -0.147 4.147 6 C 0.114 3.886 7 F -0.108 7.108 8 C -0.163 4.163 9 C 0.348 3.652 10 O -0.444 6.444 11 N -0.340 5.340 12 C 0.008 3.992 13 H 0.104 0.896 14 C -0.161 4.161 15 C -0.084 4.084 16 H 0.141 0.859 17 C -0.057 4.057 18 C -0.134 4.134 19 C -0.121 4.121 20 C -0.190 4.190 21 Br 0.020 6.980 22 C -0.119 4.119 23 C -0.129 4.129 24 C -0.182 4.182 25 C -0.083 4.083 26 C 0.066 3.934 27 F -0.069 7.069 28 H 0.240 0.760 29 H 0.165 0.835 30 H -0.217 1.217 31 H -0.209 1.209 32 H 0.182 0.818 33 H 0.258 0.742 34 H 0.119 0.881 35 H 0.113 0.887 36 H 0.163 0.837 37 H 0.153 0.847 38 H 0.157 0.843 39 H 0.173 0.827 40 H 0.089 0.911 41 H 0.115 0.885 42 H 0.209 0.791 Dipole moment (debyes) X Y Z Total from point charges 4.849 2.896 -3.370 6.576 hybrid contribution -1.401 -0.134 0.432 1.472 sum 3.448 2.762 -2.938 5.305 Atomic orbital electron populations 1.86596 1.17498 1.80399 1.50548 1.25198 0.84353 1.11489 0.97907 0.93960 0.91600 0.71506 0.77749 1.20511 0.92771 0.97624 0.98186 1.20856 1.02914 0.97524 0.93384 1.17983 0.87244 0.92154 0.91185 1.91586 1.70044 1.72636 1.76572 1.19800 0.93327 1.04259 0.98905 1.18077 0.82831 0.80472 0.83820 1.90875 1.56759 1.40992 1.55789 1.45374 1.09665 1.50413 1.28528 1.21911 0.96257 0.95844 0.85211 0.89554 1.23386 0.92628 0.97127 1.02958 1.21689 0.91503 0.99442 0.95788 0.85937 1.20021 0.95467 0.94923 0.95241 1.21253 0.98986 0.99759 0.93427 1.21287 0.92817 0.97795 1.00154 1.21986 0.96698 1.03705 0.96598 1.96756 1.51464 1.98501 1.51281 1.21344 1.00181 0.97829 0.92591 1.21375 0.93078 0.99140 0.99305 1.23576 0.95751 1.00422 0.98485 1.21362 1.01761 0.93337 0.91888 1.17076 0.87329 0.96202 0.92747 1.91241 1.69119 1.70933 1.75568 0.75971 0.83499 1.21695 1.20925 0.81786 0.74249 0.88096 0.88697 0.83740 0.84701 0.84341 0.82741 0.91095 0.88486 0.79120 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.03 11.63 -148.98 -1.73 -0.70 16 2 C -0.08 0.38 2.96 71.24 0.21 0.59 16 3 Si 0.75 -2.84 29.56 68.60 2.03 -0.81 16 4 C -0.09 0.40 5.14 -19.78 -0.10 0.30 16 5 C -0.13 0.20 9.20 22.27 0.20 0.41 16 6 C 0.13 0.39 7.28 22.67 0.17 0.55 16 7 F -0.13 -1.29 15.55 44.97 0.70 -0.59 16 8 C -0.16 0.16 5.88 -20.06 -0.12 0.04 16 9 C 0.56 1.38 7.77 86.74 0.67 2.05 16 10 O -0.56 -7.19 14.94 -3.95 -0.06 -7.25 16 11 N -0.69 3.98 5.21 -443.05 -2.31 1.67 16 12 C 0.11 -0.55 4.33 45.52 0.20 -0.35 16 13 H 0.09 0.04 7.46 -2.39 -0.02 0.03 16 14 C -0.12 1.14 7.29 31.12 0.23 1.36 16 15 C -0.07 0.61 3.86 -11.01 -0.04 0.57 16 16 H 0.12 -1.63 8.09 -2.39 -0.02 -1.65 16 17 C -0.06 0.29 5.29 -19.86 -0.11 0.19 16 18 C -0.12 0.38 8.62 22.27 0.19 0.57 16 19 C -0.10 0.02 9.79 22.29 0.22 0.24 16 20 C -0.11 -0.15 6.22 22.31 0.14 -0.01 16 21 Br -0.07 -0.19 33.70 -20.37 -0.69 -0.88 16 22 C -0.10 0.12 9.79 22.29 0.22 0.34 16 23 C -0.11 0.53 9.71 22.27 0.22 0.74 16 24 C -0.14 0.85 7.25 31.12 0.23 1.08 16 25 C -0.06 0.55 9.51 22.57 0.21 0.76 16 26 C 0.09 -0.62 6.65 22.33 0.15 -0.47 16 27 F -0.09 0.85 13.69 44.97 0.62 1.46 16 28 H 0.39 -2.94 8.42 -74.06 -0.62 -3.56 16 29 H 0.15 -1.02 7.96 -2.39 -0.02 -1.04 16 30 H -0.29 -1.00 7.11 99.48 0.71 -0.29 16 31 H -0.28 -0.29 7.11 99.48 0.71 0.42 16 32 H 0.16 -0.48 7.06 -2.91 -0.02 -0.50 16 33 H 0.42 -5.63 6.73 -92.71 -0.62 -6.25 16 34 H 0.10 -0.86 7.73 -2.39 -0.02 -0.88 16 35 H 0.09 -1.10 8.14 -2.39 -0.02 -1.12 16 36 H 0.14 -0.92 6.64 -2.91 -0.02 -0.94 16 37 H 0.14 -0.21 8.06 -2.91 -0.02 -0.24 16 38 H 0.14 -0.44 8.06 -2.91 -0.02 -0.46 16 39 H 0.15 -1.53 8.05 -2.91 -0.02 -1.56 16 40 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 41 H 0.10 -0.55 6.30 -2.39 -0.02 -0.56 16 42 H 0.19 -3.23 6.41 -2.91 -0.02 -3.25 16 Total: 0.00 -21.65 378.29 1.35 -20.30 By element: Atomic # 1 Polarization: -22.08 SS G_CDS: -0.09 Total: -22.17 kcal Atomic # 6 Polarization: 6.08 SS G_CDS: 2.88 Total: 8.96 kcal Atomic # 7 Polarization: 3.98 SS G_CDS: -2.31 Total: 1.67 kcal Atomic # 8 Polarization: -6.15 SS G_CDS: -1.79 Total: -7.95 kcal Atomic # 9 Polarization: -0.44 SS G_CDS: 1.31 Total: 0.88 kcal Atomic # 14 Polarization: -2.84 SS G_CDS: 2.03 Total: -0.81 kcal Atomic # 35 Polarization: -0.19 SS G_CDS: -0.69 Total: -0.88 kcal Total: -21.65 1.35 -20.30 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_12360598.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.033 kcal (2) G-P(sol) polarization free energy of solvation -21.646 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.679 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.347 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.299 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.332 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds