Wall clock time and date at job start Sat Mar 6 2021 11:12:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86302 * 109.47055 * 2 1 4 4 C 1.50709 * 109.46602 * 240.00677 * 2 1 3 5 5 C 1.38628 * 119.94548 * 74.99896 * 4 2 1 6 6 F 1.35100 * 119.87710 * 0.25330 * 5 4 2 7 7 C 1.38675 * 120.24072 * 179.97438 * 5 4 2 8 8 C 1.37813 * 120.11677 * 359.97438 * 7 5 4 9 9 C 1.39664 * 119.88359 * 359.97438 * 8 7 5 10 10 C 1.47724 * 120.12189 * 179.97438 * 9 8 7 11 11 O 1.21567 * 120.00061 * 179.97438 * 10 9 8 12 12 N 1.34778 * 119.99431 * 0.02562 * 10 9 8 13 13 C 1.46503 * 119.99621 * 179.97438 * 12 10 9 14 14 H 1.09003 * 112.84760 * 25.33051 * 13 12 10 15 15 C 1.53779 * 113.61538 * 156.52857 * 13 12 10 16 16 C 1.53784 * 87.07803 * 89.11675 * 15 13 12 17 17 H 1.08998 * 113.61459 * 270.79455 * 16 15 13 18 18 C 1.50703 * 113.61256 * 139.98747 * 16 15 13 19 19 C 1.38247 * 119.98418 * 299.71734 * 18 16 15 20 20 C 1.38220 * 120.00454 * 179.76766 * 19 18 16 21 21 C 1.38320 * 119.99170 * 0.51333 * 20 19 18 22 22 Br 1.89099 * 120.01040 * 179.76565 * 21 20 19 23 23 C 1.38323 * 119.97869 * 359.74128 * 21 20 19 24 24 C 1.38212 * 119.99233 * 0.02562 * 23 21 20 25 25 C 1.53778 * 113.61397 * 254.13970 * 13 12 10 26 26 C 1.37861 * 119.93477 * 254.97369 * 4 2 1 27 27 H 0.96705 * 113.99684 * 299.99881 * 1 2 3 28 28 H 1.08997 * 109.47067 * 120.00513 * 2 1 3 29 29 H 1.48504 * 109.99538 * 178.68448 * 3 2 1 30 30 H 1.48500 * 110.00101 * 300.00300 * 3 2 1 31 31 H 1.08006 * 119.93815 * 179.97438 * 7 5 4 32 32 H 1.08000 * 120.05605 * 179.97438 * 8 7 5 33 33 H 0.96998 * 120.00332 * 359.97438 * 12 10 9 34 34 H 1.08993 * 113.61200 * 203.66267 * 15 13 12 35 35 H 1.08998 * 113.61160 * 334.48539 * 15 13 12 36 36 H 1.07994 * 119.99544 * 0.02818 * 19 18 16 37 37 H 1.08003 * 120.00268 * 180.22978 * 20 19 18 38 38 H 1.08004 * 120.00579 * 180.02562 * 23 21 20 39 39 H 1.08007 * 119.99786 * 180.02562 * 24 23 21 40 40 H 1.09002 * 113.61931 * 25.42554 * 25 13 12 41 41 H 1.08996 * 113.61733 * 156.33591 * 25 13 12 42 42 H 1.08003 * 120.06291 * 0.02562 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2307 5 6 1.8687 -0.0834 -2.4655 6 9 1.3621 1.1654 -2.5613 7 6 2.3296 -0.7311 -3.6018 8 6 2.8531 -2.0025 -3.5086 9 6 2.9195 -2.6385 -2.2669 10 6 3.4791 -4.0015 -2.1611 11 8 3.5363 -4.5528 -1.0791 12 7 3.9273 -4.6334 -3.2640 13 6 4.4828 -5.9849 -3.1590 14 1 4.1021 -6.5332 -2.2972 15 6 4.4187 -6.7811 -4.4730 16 6 5.7952 -6.1840 -4.8103 17 1 5.7406 -5.2336 -5.3412 18 6 6.7355 -7.1650 -5.4618 19 6 7.1012 -8.3191 -4.7943 20 6 7.9599 -9.2215 -5.3934 21 6 8.4616 -8.9645 -6.6565 22 35 9.6416 -10.1955 -7.4740 23 6 8.0995 -7.8071 -7.3218 24 6 7.2371 -6.9076 -6.7240 25 6 6.0139 -6.0337 -3.2928 26 6 2.4526 -1.9823 -1.1262 27 1 -0.3933 0.4417 0.7651 28 1 1.7924 -0.5139 0.8899 29 1 3.5347 1.7702 0.0320 30 1 1.5615 2.4679 -1.2084 31 1 2.2782 -0.2382 -4.5614 32 1 3.2114 -2.5062 -4.3942 33 1 3.8820 -4.1933 -4.1272 34 1 4.4346 -7.8615 -4.3301 35 1 3.6235 -6.4544 -5.1431 36 1 6.7126 -8.5177 -3.8065 37 1 8.2426 -10.1249 -4.8735 38 1 8.4907 -7.6062 -8.3082 39 1 6.9540 -6.0040 -7.2435 40 1 6.5068 -5.1031 -3.0114 41 1 6.4652 -6.9102 -2.8279 42 1 2.5009 -2.4699 -0.1637 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_12496548.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:12:14 Heat of formation + Delta-G solvation = -11.185375 kcal Electronic energy + Delta-G solvation = -28171.554548 eV Core-core repulsion = 23852.238162 eV Total energy + Delta-G solvation = -4319.316386 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.037 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -50.57100 -41.85023 -40.91772 -39.78189 -38.75328 -37.63400 -34.97316 -33.35624 -32.82066 -32.07119 -31.92090 -30.29770 -27.06240 -26.72147 -26.27184 -24.88270 -23.84782 -23.46247 -22.42647 -21.64554 -20.24830 -19.05967 -18.98677 -18.52878 -18.04709 -17.92475 -17.16875 -16.94812 -16.55238 -16.24464 -16.21110 -16.04317 -15.48856 -15.23347 -15.19031 -15.09309 -14.80447 -14.68339 -14.50490 -14.28276 -14.22101 -13.90504 -13.69093 -13.45352 -13.39984 -12.93085 -12.85141 -12.42080 -12.34425 -12.07519 -11.88207 -11.58379 -11.43347 -11.30079 -11.26033 -11.22656 -10.66294 -10.31812 -10.18191 -10.01814 -9.91156 -9.51837 -4.98508 -0.63844 -0.11432 0.04723 0.31640 0.64959 1.21276 1.46528 1.61638 1.89398 1.94470 2.42632 2.55759 2.87758 3.16420 3.41898 3.43916 3.48244 3.63845 3.68699 3.74438 3.82114 3.87626 3.94250 3.94618 4.01381 4.19010 4.21798 4.35216 4.40783 4.53228 4.60780 4.63322 4.70367 4.77017 4.77692 4.80881 4.86087 4.88649 4.96469 5.00738 5.03843 5.11680 5.23104 5.23353 5.43081 5.48526 5.62771 5.83401 6.36092 6.80631 7.03272 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.562 6.562 2 C -0.078 4.078 3 Si 0.756 3.244 4 C -0.137 4.137 5 C 0.100 3.900 6 F -0.126 7.126 7 C -0.154 4.154 8 C -0.038 4.038 9 C -0.154 4.154 10 C 0.565 3.435 11 O -0.572 6.572 12 N -0.692 5.692 13 C 0.114 3.886 14 H 0.088 0.912 15 C -0.123 4.123 16 C -0.067 4.067 17 H 0.119 0.881 18 C -0.056 4.056 19 C -0.115 4.115 20 C -0.100 4.100 21 C -0.110 4.110 22 Br -0.064 7.064 23 C -0.100 4.100 24 C -0.112 4.112 25 C -0.143 4.143 26 C -0.024 4.024 27 H 0.405 0.595 28 H 0.097 0.903 29 H -0.303 1.303 30 H -0.265 1.265 31 H 0.173 0.827 32 H 0.181 0.819 33 H 0.417 0.583 34 H 0.102 0.898 35 H 0.092 0.908 36 H 0.146 0.854 37 H 0.137 0.863 38 H 0.138 0.862 39 H 0.153 0.847 40 H 0.069 0.931 41 H 0.099 0.901 42 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.256 2.319 -1.411 2.991 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.372 6.372 2 C -0.188 4.188 3 Si 0.660 3.340 4 C -0.138 4.138 5 C 0.081 3.919 6 F -0.105 7.105 7 C -0.172 4.172 8 C -0.056 4.056 9 C -0.158 4.158 10 C 0.354 3.646 11 O -0.452 6.452 12 N -0.344 5.344 13 C 0.008 3.992 14 H 0.106 0.894 15 C -0.161 4.161 16 C -0.085 4.085 17 H 0.137 0.863 18 C -0.057 4.057 19 C -0.133 4.133 20 C -0.120 4.120 21 C -0.190 4.190 22 Br 0.021 6.979 23 C -0.119 4.119 24 C -0.131 4.131 25 C -0.182 4.182 26 C -0.043 4.043 27 H 0.257 0.743 28 H 0.115 0.885 29 H -0.230 1.230 30 H -0.192 1.192 31 H 0.190 0.810 32 H 0.198 0.802 33 H 0.255 0.745 34 H 0.121 0.879 35 H 0.111 0.889 36 H 0.164 0.836 37 H 0.154 0.846 38 H 0.156 0.844 39 H 0.170 0.830 40 H 0.088 0.912 41 H 0.117 0.883 42 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges -0.231 1.770 -1.938 2.635 hybrid contribution -0.035 -0.021 -0.304 0.306 sum -0.266 1.749 -2.242 2.856 Atomic orbital electron populations 1.86446 1.16735 1.82396 1.51615 1.24745 0.86372 1.11077 0.96579 0.95012 0.77740 0.76581 0.84631 1.19595 1.04398 0.95939 0.93909 1.18352 0.97254 0.80763 0.95536 1.91480 1.84986 1.38048 1.95968 1.21471 1.00901 0.96361 0.98464 1.21558 0.93828 0.93044 0.97177 1.20023 1.05434 0.95151 0.95143 1.18209 0.77002 0.85288 0.84151 1.90799 1.57590 1.67966 1.28858 1.45429 1.61948 1.16739 1.10235 1.21907 0.94390 0.82752 1.00110 0.89379 1.23375 0.96670 1.00876 0.95188 1.21722 0.93718 0.98022 0.95046 0.86314 1.20018 0.96481 0.95069 0.94123 1.21258 0.97576 0.93645 1.00863 1.21297 0.96945 1.00424 0.93288 1.21983 1.02010 0.97067 0.97901 1.96756 1.61280 1.58623 1.81238 1.21332 0.97624 0.92533 1.00458 1.21357 0.96631 0.99962 0.95102 1.23620 0.95751 1.03387 0.95420 1.21095 0.92215 0.91259 0.99717 0.74284 0.88522 1.23037 1.19178 0.80998 0.80173 0.74454 0.87945 0.88923 0.83603 0.84557 0.84382 0.82978 0.91247 0.88315 0.83700 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.82 12.86 -148.98 -1.92 -2.73 16 2 C -0.08 -0.09 2.80 71.24 0.20 0.11 16 3 Si 0.76 0.22 30.77 68.60 2.11 2.33 16 4 C -0.14 -0.65 4.80 -19.86 -0.10 -0.75 16 5 C 0.10 0.46 6.68 22.47 0.15 0.61 16 6 F -0.13 -1.01 12.82 44.97 0.58 -0.43 16 7 C -0.15 0.30 10.01 22.27 0.22 0.52 16 8 C -0.04 0.19 9.54 22.51 0.21 0.40 16 9 C -0.15 -0.15 5.87 -20.09 -0.12 -0.27 16 10 C 0.57 1.59 7.77 86.75 0.67 2.26 16 11 O -0.57 -6.59 15.96 -3.93 -0.06 -6.65 16 12 N -0.69 3.29 5.21 -443.02 -2.31 0.98 16 13 C 0.11 -0.49 4.29 45.52 0.20 -0.29 16 14 H 0.09 0.04 7.50 -2.39 -0.02 0.02 16 15 C -0.12 1.04 7.29 31.12 0.23 1.27 16 16 C -0.07 0.55 3.87 -10.92 -0.04 0.51 16 17 H 0.12 -1.39 8.09 -2.39 -0.02 -1.41 16 18 C -0.06 0.25 5.29 -19.86 -0.11 0.15 16 19 C -0.11 0.34 8.62 22.27 0.19 0.53 16 20 C -0.10 0.00 9.79 22.28 0.22 0.22 16 21 C -0.11 -0.19 6.22 22.31 0.14 -0.05 16 22 Br -0.06 -0.20 33.70 -20.37 -0.69 -0.89 16 23 C -0.10 0.06 9.79 22.28 0.22 0.28 16 24 C -0.11 0.43 9.71 22.26 0.22 0.65 16 25 C -0.14 0.76 7.27 31.21 0.23 0.98 16 26 C -0.02 -0.10 9.21 22.52 0.21 0.11 16 27 H 0.41 -3.70 8.74 -74.05 -0.65 -4.34 16 28 H 0.10 -0.27 7.77 -2.39 -0.02 -0.29 16 29 H -0.30 -2.08 7.11 99.48 0.71 -1.37 16 30 H -0.27 -1.83 5.33 99.48 0.53 -1.30 16 31 H 0.17 -1.25 8.06 -2.91 -0.02 -1.27 16 32 H 0.18 -2.55 6.40 -2.91 -0.02 -2.56 16 33 H 0.42 -4.87 6.73 -92.71 -0.62 -5.49 16 34 H 0.10 -0.83 7.73 -2.39 -0.02 -0.85 16 35 H 0.09 -0.97 8.14 -2.39 -0.02 -0.99 16 36 H 0.15 -0.92 6.64 -2.91 -0.02 -0.94 16 37 H 0.14 -0.21 8.06 -2.91 -0.02 -0.24 16 38 H 0.14 -0.34 8.06 -2.91 -0.02 -0.37 16 39 H 0.15 -1.32 8.05 -2.91 -0.02 -1.35 16 40 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 41 H 0.10 -0.53 6.30 -2.39 -0.02 -0.55 16 42 H 0.15 0.65 7.59 -2.91 -0.02 0.62 16 Total: 0.00 -23.39 374.58 0.34 -23.06 By element: Atomic # 1 Polarization: -22.58 SS G_CDS: -0.32 Total: -22.90 kcal Atomic # 6 Polarization: 4.31 SS G_CDS: 2.94 Total: 7.25 kcal Atomic # 7 Polarization: 3.29 SS G_CDS: -2.31 Total: 0.98 kcal Atomic # 8 Polarization: -7.41 SS G_CDS: -1.98 Total: -9.39 kcal Atomic # 9 Polarization: -1.01 SS G_CDS: 0.58 Total: -0.43 kcal Atomic # 14 Polarization: 0.22 SS G_CDS: 2.11 Total: 2.33 kcal Atomic # 35 Polarization: -0.20 SS G_CDS: -0.69 Total: -0.89 kcal Total: -23.39 0.34 -23.06 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_12496548.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.870 kcal (2) G-P(sol) polarization free energy of solvation -23.392 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.521 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.336 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.056 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.185 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds