Wall clock time and date at job start Sat Mar 6 2021 11:12:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50694 * 109.47118 * 120.00721 * 2 1 3 5 5 C 1.35093 * 126.07074 * 255.02023 * 4 2 1 6 6 N 1.35042 * 107.97542 * 180.02562 * 5 4 2 7 7 C 1.46502 * 125.92720 * 180.02562 * 6 5 4 8 8 C 1.50700 * 109.46717 * 125.00017 * 7 6 5 9 9 O 1.21280 * 120.00333 * 0.02562 * 8 7 6 10 10 N 1.34778 * 119.99759 * 179.97438 * 8 7 6 11 11 C 1.46500 * 120.00334 * 179.97438 * 10 8 7 12 12 H 1.09008 * 112.84647 * 336.20004 * 11 10 8 13 13 C 1.53774 * 113.61397 * 107.50387 * 11 10 8 14 14 C 1.53786 * 87.08198 * 89.11991 * 13 11 10 15 15 H 1.09000 * 113.61088 * 270.88626 * 14 13 11 16 16 C 1.50699 * 113.69365 * 139.98984 * 14 13 11 17 17 C 1.38238 * 119.98745 * 322.19720 * 16 14 13 18 18 C 1.38220 * 120.00746 * 179.72618 * 17 16 14 19 19 C 1.38324 * 119.98985 * 0.54232 * 18 17 16 20 20 Br 1.89102 * 120.01134 * 179.70721 * 19 18 17 21 21 C 1.38329 * 119.97811 * 359.72754 * 19 18 17 22 22 C 1.38215 * 119.98729 * 0.02562 * 21 19 18 23 23 C 1.53781 * 113.61759 * 205.00446 * 11 10 8 24 24 N 1.40072 * 108.13750 * 0.02562 * 6 5 4 25 25 C 1.31617 * 108.11010 * 359.71427 * 24 6 5 26 26 C 1.48421 * 126.03689 * 180.29476 * 25 24 6 27 27 C 1.39325 * 120.11971 * 144.89694 * 26 25 24 28 28 C 1.38017 * 119.88022 * 179.74737 * 27 26 25 29 29 C 1.38319 * 120.12136 * 0.54862 * 28 27 26 30 30 C 1.38319 * 120.23823 * 359.70071 * 29 28 27 31 31 C 1.38028 * 120.12209 * 0.02562 * 30 29 28 32 32 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 33 33 H 1.09004 * 109.46690 * 240.00803 * 2 1 3 34 34 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 35 35 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 36 36 H 1.07996 * 126.01192 * 359.96679 * 5 4 2 37 37 H 1.09004 * 109.46871 * 244.99646 * 7 6 5 38 38 H 1.08997 * 109.47223 * 4.99941 * 7 6 5 39 39 H 0.97008 * 119.99681 * 0.02562 * 10 8 7 40 40 H 1.09000 * 113.61845 * 203.66504 * 13 11 10 41 41 H 1.08999 * 113.61648 * 334.57164 * 13 11 10 42 42 H 1.07999 * 120.00034 * 359.97438 * 17 16 14 43 43 H 1.08002 * 120.00360 * 180.24715 * 18 17 16 44 44 H 1.08000 * 120.00463 * 179.97438 * 21 19 18 45 45 H 1.08002 * 119.99212 * 179.97438 * 22 21 19 46 46 H 1.09004 * 113.61188 * 25.43641 * 23 11 10 47 47 H 1.09003 * 113.61127 * 156.33454 * 23 11 10 48 48 H 1.08007 * 120.05541 * 359.97438 * 27 26 25 49 49 H 1.07999 * 119.94277 * 180.27278 * 28 27 26 50 50 H 1.07997 * 119.88313 * 179.72464 * 29 28 27 51 51 H 1.08001 * 119.94512 * 180.02562 * 30 29 28 52 52 H 1.08000 * 120.06074 * 180.02562 * 31 30 29 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2303 5 6 2.4626 -0.1251 2.3258 6 7 2.7887 -1.0993 3.2022 7 6 3.3934 -0.9012 4.5219 8 6 2.5399 -1.5670 5.5704 9 8 1.5267 -2.1499 5.2472 10 7 2.9031 -1.5154 6.8673 11 6 2.0732 -2.1621 7.8867 12 1 1.0355 -2.2808 7.5749 13 6 2.6951 -3.4441 8.4650 14 6 3.3764 -2.5474 9.5122 15 1 4.3501 -2.1715 9.1981 16 6 3.3974 -3.1418 10.8969 17 6 2.3104 -3.8620 11.3561 18 6 2.3315 -4.4122 12.6239 19 6 3.4359 -4.2326 13.4373 20 35 3.4620 -4.9781 15.1750 21 6 4.5210 -3.5072 12.9793 22 6 4.5010 -2.9617 11.7095 23 6 2.2289 -1.5484 9.2881 24 7 2.4486 -2.3320 2.6305 25 6 1.9261 -2.1026 1.4444 26 6 1.4231 -3.1296 0.4984 27 6 0.3156 -2.8597 -0.3027 28 6 -0.1448 -3.8164 -1.1844 29 6 0.4842 -5.0457 -1.2656 30 6 1.5809 -5.3209 -0.4689 31 6 2.0532 -4.3693 0.4124 32 1 -0.3934 0.4418 -0.7650 33 1 1.7923 -0.5137 -0.8901 34 1 1.5616 2.4678 1.2086 35 1 3.5346 1.7703 -0.0322 36 1 2.6027 0.9354 2.4741 37 1 4.3913 -1.3395 4.5337 38 1 3.4625 0.1658 4.7334 39 1 3.7138 -1.0495 7.1257 40 1 1.9633 -4.1318 8.8888 41 1 3.3950 -3.9338 7.7879 42 1 1.4463 -3.9981 10.7229 43 1 1.4839 -4.9782 12.9812 44 1 5.3833 -3.3664 13.6141 45 1 5.3480 -2.3950 11.3520 46 1 2.5523 -0.5075 9.2754 47 1 1.3695 -1.7177 9.9369 48 1 -0.1794 -1.9020 -0.2364 49 1 -1.0005 -3.6066 -1.8090 50 1 0.1179 -5.7931 -1.9537 51 1 2.0686 -6.2821 -0.5364 52 1 2.9098 -4.5851 1.0336 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_12622748.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:12:19 Heat of formation + Delta-G solvation = 110.036923 kcal Electronic energy + Delta-G solvation = -36321.617047 eV Core-core repulsion = 31494.868129 eV Total energy + Delta-G solvation = -4826.748918 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 468.084 amu Computer time = 1.47 seconds Orbital eigenvalues (eV) -42.62305 -41.65942 -40.47898 -39.78682 -38.91407 -37.68822 -35.02646 -34.72890 -33.12243 -32.45049 -32.08628 -31.87028 -31.51835 -30.43468 -28.85665 -26.77954 -26.21683 -25.68469 -24.32226 -23.86737 -23.48971 -22.53380 -22.10965 -21.61727 -20.88800 -20.23488 -18.69297 -18.48528 -18.29938 -17.91000 -17.61718 -16.96296 -16.76747 -16.55006 -16.23921 -16.13906 -15.98566 -15.83928 -15.46809 -15.33262 -15.08214 -15.04045 -14.78513 -14.58127 -14.51332 -14.37279 -14.30655 -14.21732 -13.83580 -13.72056 -13.59529 -13.51458 -13.28454 -12.96670 -12.73940 -12.45906 -12.27634 -12.15647 -12.11849 -11.92543 -11.85397 -11.62390 -11.47120 -11.40151 -11.32671 -11.28613 -10.76332 -10.23746 -10.15357 -10.05209 -9.89788 -9.83616 -9.55646 -9.35766 -4.89824 0.00836 0.03828 0.27808 0.48582 0.61611 0.62543 1.17649 1.34753 1.38564 1.58136 1.77373 1.94111 2.01540 2.51642 2.88659 3.23312 3.37826 3.44842 3.45869 3.58898 3.63321 3.75954 3.77804 3.78123 3.89511 3.90775 3.98593 4.02234 4.05814 4.14093 4.14239 4.26970 4.31126 4.35242 4.36781 4.48964 4.55197 4.60931 4.66318 4.70308 4.74735 4.76189 4.80809 4.83679 4.94365 4.97797 4.99251 5.06226 5.18017 5.19145 5.19454 5.25872 5.41293 5.56575 5.58304 5.62328 5.62590 5.73574 5.79441 6.06979 6.35198 6.45711 7.01207 7.05976 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.046 4.046 3 Si 0.789 3.211 4 C -0.228 4.228 5 C 0.057 3.943 6 N -0.360 5.360 7 C 0.108 3.892 8 C 0.499 3.501 9 O -0.564 6.564 10 N -0.692 5.692 11 C 0.116 3.884 12 H 0.077 0.923 13 C -0.145 4.145 14 C -0.063 4.063 15 H 0.122 0.878 16 C -0.058 4.058 17 C -0.116 4.116 18 C -0.100 4.100 19 C -0.110 4.110 20 Br -0.063 7.063 21 C -0.099 4.099 22 C -0.110 4.110 23 C -0.121 4.121 24 N -0.289 5.289 25 C 0.111 3.889 26 C -0.042 4.042 27 C -0.111 4.111 28 C -0.126 4.126 29 C -0.115 4.115 30 C -0.132 4.132 31 C -0.111 4.111 32 H 0.401 0.599 33 H 0.076 0.924 34 H -0.283 1.283 35 H -0.288 1.288 36 H 0.199 0.801 37 H 0.146 0.854 38 H 0.173 0.827 39 H 0.422 0.578 40 H 0.093 0.907 41 H 0.066 0.934 42 H 0.142 0.858 43 H 0.136 0.864 44 H 0.140 0.860 45 H 0.154 0.846 46 H 0.095 0.905 47 H 0.098 0.902 48 H 0.159 0.841 49 H 0.151 0.849 50 H 0.148 0.852 51 H 0.141 0.859 52 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.677 7.616 -3.391 9.112 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.371 6.371 2 C -0.156 4.156 3 Si 0.693 3.307 4 C -0.239 4.239 5 C -0.089 4.089 6 N -0.142 5.142 7 C -0.016 4.016 8 C 0.284 3.716 9 O -0.441 6.441 10 N -0.346 5.346 11 C 0.010 3.990 12 H 0.095 0.905 13 C -0.183 4.183 14 C -0.081 4.081 15 H 0.140 0.860 16 C -0.058 4.058 17 C -0.135 4.135 18 C -0.120 4.120 19 C -0.189 4.189 20 Br 0.023 6.977 21 C -0.118 4.118 22 C -0.129 4.129 23 C -0.159 4.159 24 N -0.111 5.111 25 C -0.054 4.054 26 C -0.044 4.044 27 C -0.130 4.130 28 C -0.143 4.143 29 C -0.133 4.133 30 C -0.150 4.150 31 C -0.131 4.131 32 H 0.253 0.747 33 H 0.094 0.906 34 H -0.210 1.210 35 H -0.215 1.215 36 H 0.216 0.784 37 H 0.164 0.836 38 H 0.190 0.810 39 H 0.261 0.739 40 H 0.111 0.889 41 H 0.085 0.915 42 H 0.160 0.840 43 H 0.154 0.846 44 H 0.158 0.842 45 H 0.172 0.828 46 H 0.114 0.886 47 H 0.116 0.884 48 H 0.176 0.824 49 H 0.168 0.832 50 H 0.166 0.834 51 H 0.159 0.841 52 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges 3.948 6.362 -0.947 7.547 hybrid contribution 0.180 -0.200 0.021 0.270 sum 4.128 6.162 -0.926 7.474 Atomic orbital electron populations 1.86405 1.17901 1.81443 1.51363 1.24243 0.85245 1.11199 0.94895 0.93952 0.77376 0.73850 0.85559 1.19898 1.12501 0.92118 0.99415 1.22592 1.00252 0.95994 0.90031 1.48111 1.48383 1.03497 1.14200 1.22005 0.97200 1.06180 0.76172 1.20993 0.85895 0.80305 0.84367 1.90833 1.27745 1.44005 1.81513 1.45395 1.28354 1.56165 1.04701 1.21810 0.95010 0.94192 0.87982 0.90517 1.23555 1.00382 0.96723 0.97664 1.21647 1.00224 0.96369 0.89865 0.86013 1.20012 0.93548 0.96262 0.95985 1.21230 0.99406 0.97698 0.95178 1.21285 0.97179 0.99378 0.94138 1.21986 0.99182 1.04839 0.92885 1.96756 1.99059 1.83456 1.18458 1.21350 0.97274 0.96156 0.97057 1.21359 0.99003 0.99650 0.92866 1.23360 0.98826 0.99990 0.93720 1.77666 1.20603 1.03746 1.09063 1.21005 0.98376 0.93584 0.92390 1.18037 0.97622 0.92301 0.96413 1.22105 0.94656 1.01971 0.94227 1.21470 1.00726 0.93331 0.98812 1.21637 0.95169 0.97645 0.98838 1.21340 0.97673 0.99614 0.96330 1.21286 1.00042 0.92956 0.98806 0.74723 0.90583 1.21009 1.21479 0.78443 0.83627 0.80966 0.73934 0.88911 0.91487 0.84032 0.84626 0.84184 0.82791 0.88627 0.88361 0.82372 0.83169 0.83433 0.84140 0.86928 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.35 10.05 -148.98 -1.50 -1.84 16 2 C -0.05 -0.07 2.00 71.23 0.14 0.08 16 3 Si 0.79 -2.96 30.78 68.60 2.11 -0.85 16 4 C -0.23 -2.03 5.37 -19.95 -0.11 -2.14 16 5 C 0.06 0.32 9.96 83.47 0.83 1.15 16 6 N -0.36 -2.65 3.40 -351.90 -1.20 -3.85 16 7 C 0.11 -0.36 6.99 85.63 0.60 0.24 16 8 C 0.50 1.48 7.86 87.66 0.69 2.17 16 9 O -0.56 -9.11 15.30 -3.03 -0.05 -9.16 16 10 N -0.69 3.41 5.26 -440.04 -2.32 1.10 16 11 C 0.12 -0.27 4.32 45.52 0.20 -0.07 16 12 H 0.08 0.33 7.47 -2.38 -0.02 0.31 16 13 C -0.14 0.42 7.26 31.12 0.23 0.65 16 14 C -0.06 0.44 3.85 -11.01 -0.04 0.40 16 15 H 0.12 -1.34 8.09 -2.39 -0.02 -1.36 16 16 C -0.06 0.19 5.29 -19.87 -0.11 0.08 16 17 C -0.12 0.15 8.60 22.27 0.19 0.35 16 18 C -0.10 -0.13 9.79 22.29 0.22 0.09 16 19 C -0.11 -0.28 6.22 22.31 0.14 -0.14 16 20 Br -0.06 -0.23 33.70 -20.37 -0.69 -0.92 16 21 C -0.10 0.00 9.79 22.29 0.22 0.22 16 22 C -0.11 0.35 9.71 22.26 0.22 0.57 16 23 C -0.12 0.86 7.29 31.12 0.23 1.09 16 24 N -0.29 -4.48 11.63 -48.16 -0.56 -5.04 16 25 C 0.11 1.58 6.74 42.53 0.29 1.87 16 26 C -0.04 -0.53 5.80 -20.04 -0.12 -0.64 16 27 C -0.11 -0.95 8.95 22.48 0.20 -0.74 16 28 C -0.13 -0.55 10.03 22.24 0.22 -0.32 16 29 C -0.11 -0.45 10.04 22.31 0.22 -0.22 16 30 C -0.13 -0.85 10.03 22.24 0.22 -0.62 16 31 C -0.11 -1.24 9.75 22.48 0.22 -1.02 16 32 H 0.40 -4.28 8.74 -74.05 -0.65 -4.92 16 33 H 0.08 0.00 7.86 -2.38 -0.02 -0.02 16 34 H -0.28 -0.29 7.04 99.48 0.70 0.41 16 35 H -0.29 -0.40 7.11 99.48 0.71 0.31 16 36 H 0.20 -0.25 6.36 -2.91 -0.02 -0.27 16 37 H 0.15 -1.29 8.14 -2.39 -0.02 -1.31 16 38 H 0.17 -2.26 8.07 -2.39 -0.02 -2.28 16 39 H 0.42 -5.59 8.70 -92.70 -0.81 -6.40 16 40 H 0.09 -0.20 6.33 -2.39 -0.02 -0.21 16 41 H 0.07 -0.04 8.14 -2.39 -0.02 -0.06 16 42 H 0.14 -0.55 6.68 -2.91 -0.02 -0.57 16 43 H 0.14 -0.03 8.06 -2.91 -0.02 -0.05 16 44 H 0.14 -0.31 8.06 -2.91 -0.02 -0.33 16 45 H 0.15 -1.28 8.05 -2.91 -0.02 -1.31 16 46 H 0.10 -0.94 8.14 -2.38 -0.02 -0.96 16 47 H 0.10 -0.60 7.71 -2.39 -0.02 -0.62 16 48 H 0.16 1.11 4.51 -2.91 -0.01 1.10 16 49 H 0.15 -0.20 8.06 -2.91 -0.02 -0.23 16 50 H 0.15 -0.24 8.06 -2.91 -0.02 -0.27 16 51 H 0.14 0.27 8.06 -2.91 -0.02 0.25 16 52 H 0.11 1.31 8.06 -2.91 -0.02 1.28 16 Total: 0.00 -35.31 451.27 0.28 -35.03 By element: Atomic # 1 Polarization: -17.05 SS G_CDS: -0.43 Total: -17.48 kcal Atomic # 6 Polarization: -1.88 SS G_CDS: 4.90 Total: 3.02 kcal Atomic # 7 Polarization: -3.72 SS G_CDS: -4.07 Total: -7.79 kcal Atomic # 8 Polarization: -9.46 SS G_CDS: -1.54 Total: -11.00 kcal Atomic # 14 Polarization: -2.96 SS G_CDS: 2.11 Total: -0.85 kcal Atomic # 35 Polarization: -0.23 SS G_CDS: -0.69 Total: -0.92 kcal Total: -35.31 0.28 -35.03 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_12622748.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 145.070 kcal (2) G-P(sol) polarization free energy of solvation -35.312 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 109.758 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.279 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.033 kcal (6) G-S(sol) free energy of system = (1) + (5) 110.037 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.47 seconds