Wall clock time and date at job start Sat Mar 6 2021 11:12:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86299 * 109.47066 * 2 1 4 4 C 1.50703 * 109.46912 * 119.99697 * 2 1 3 5 5 C 1.34832 * 125.65079 * 65.29772 * 4 2 1 6 6 C 1.40795 * 107.04964 * 180.12168 * 5 4 2 7 7 C 1.36109 * 106.73337 * 359.60553 * 6 5 4 8 8 C 1.47569 * 125.94733 * 180.24168 * 7 6 5 9 9 C 1.39563 * 119.95444 * 179.72083 * 8 7 6 10 10 C 1.38328 * 119.80873 * 179.76454 * 9 8 7 11 11 O 1.35679 * 120.13413 * 180.25561 * 10 9 8 12 12 C 1.40365 * 119.72378 * 0.51678 * 10 9 8 13 13 C 1.47293 * 120.04251 * 179.76380 * 12 10 9 14 14 O 1.21620 * 120.00132 * 359.97438 * 13 12 10 15 15 N 1.34780 * 119.99878 * 179.97438 * 13 12 10 16 16 C 1.46499 * 120.00023 * 180.02562 * 15 13 12 17 17 H 1.08998 * 112.84860 * 25.33105 * 16 15 13 18 18 C 1.53779 * 113.61410 * 156.53113 * 16 15 13 19 19 C 1.53780 * 87.08210 * 89.11651 * 18 16 15 20 20 H 1.09004 * 113.61093 * 270.80021 * 19 18 16 21 21 C 1.50693 * 113.61498 * 139.98176 * 19 18 16 22 22 C 1.38242 * 119.99016 * 299.72500 * 21 19 18 23 23 C 1.38223 * 120.01220 * 179.72612 * 22 21 19 24 24 C 1.38331 * 119.98674 * 0.54548 * 23 22 21 25 25 Br 1.89097 * 120.01094 * 179.70394 * 24 23 22 26 26 C 1.38323 * 119.97796 * 359.72857 * 24 23 22 27 27 C 1.38218 * 119.99533 * 359.97438 * 26 24 23 28 28 C 1.53784 * 113.61430 * 254.13871 * 16 15 13 29 29 C 1.39916 * 119.91000 * 359.73948 * 12 10 9 30 30 C 1.36385 * 120.18440 * 359.97438 * 29 12 10 31 31 O 1.34226 * 125.65134 * 244.97559 * 4 2 1 32 32 H 0.96700 * 113.99935 * 59.99573 * 1 2 3 33 33 H 1.08996 * 109.47346 * 240.00055 * 2 1 3 34 34 H 1.48502 * 110.00364 * 59.99949 * 3 2 1 35 35 H 1.48501 * 110.00174 * 181.32033 * 3 2 1 36 36 H 1.07995 * 126.47640 * 359.96424 * 5 4 2 37 37 H 1.08002 * 126.63743 * 179.87482 * 6 5 4 38 38 H 1.08001 * 120.09552 * 0.02562 * 9 8 7 39 39 H 0.96699 * 113.99829 * 270.25900 * 11 10 9 40 40 H 0.96996 * 120.00006 * 359.97438 * 15 13 12 41 41 H 1.09003 * 113.61005 * 203.66523 * 18 16 15 42 42 H 1.08995 * 113.61639 * 334.47778 * 18 16 15 43 43 H 1.07995 * 119.99383 * 359.97438 * 22 21 19 44 44 H 1.07999 * 120.00850 * 180.25028 * 23 22 21 45 45 H 1.08004 * 120.00440 * 179.97438 * 26 24 23 46 46 H 1.07998 * 120.00181 * 179.97438 * 27 26 24 47 47 H 1.09000 * 113.61153 * 25.42615 * 28 16 15 48 48 H 1.08993 * 113.61477 * 156.33204 * 28 16 15 49 49 H 1.07994 * 119.90689 * 180.02562 * 29 12 10 50 50 H 1.08003 * 119.86314 * 179.97438 * 30 29 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.7615 -2.0191 1.5067 6 6 2.3808 -2.2629 2.7475 7 6 2.9083 -1.0785 3.1616 8 6 3.6578 -0.8543 4.4128 9 6 4.1503 0.4169 4.7119 10 6 4.8483 0.6247 5.8879 11 8 5.3256 1.8590 6.1877 12 6 5.0655 -0.4476 6.7672 13 6 5.8123 -0.2353 8.0189 14 8 6.2416 0.8696 8.2909 15 7 6.0199 -1.2655 8.8627 16 6 6.7622 -1.0543 10.1080 17 1 6.7135 -0.0239 10.4601 18 6 6.4466 -2.0931 11.1970 19 6 7.5809 -2.9447 10.6029 20 1 7.2521 -3.6197 9.8127 21 6 8.4293 -3.6301 11.6427 22 6 9.1195 -2.8793 12.5759 23 6 9.8934 -3.5078 13.5334 24 6 9.9860 -4.8879 13.5508 25 35 11.0511 -5.7480 14.8552 26 6 9.2996 -5.6385 12.6133 27 6 8.5212 -5.0094 11.6600 28 6 8.1883 -1.6290 10.0801 29 6 4.5712 -1.7184 6.4532 30 6 3.8785 -1.9179 5.2954 31 8 2.6270 -0.1463 2.2303 32 1 -0.3933 0.4418 -0.7650 33 1 1.7924 -0.5138 -0.8899 34 1 1.5615 2.4680 1.2085 35 1 3.5346 1.7703 -0.0322 36 1 1.2456 -2.7431 0.8935 37 1 2.4316 -3.2079 3.2678 38 1 3.9834 1.2368 4.0290 39 1 6.2184 2.0265 5.8563 40 1 5.6772 -2.1467 8.6459 41 1 6.6490 -1.7405 12.2084 42 1 5.4601 -2.5456 11.0961 43 1 9.0510 -1.8016 12.5593 44 1 10.4294 -2.9213 14.2649 45 1 9.3720 -6.7160 12.6262 46 1 7.9856 -5.5954 10.9278 47 1 8.6075 -1.7084 9.0771 48 1 8.8660 -1.1499 10.7866 49 1 4.7380 -2.5433 7.1299 50 1 3.4996 -2.9010 5.0581 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_12807986.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:12:30 Heat of formation + Delta-G solvation = 3.051186 kcal Electronic energy + Delta-G solvation = -36066.874380 eV Core-core repulsion = 31040.048889 eV Total energy + Delta-G solvation = -5026.825492 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 470.061 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -43.87832 -41.90275 -41.08444 -39.87554 -38.69020 -38.08492 -37.83195 -34.95233 -34.35349 -33.59910 -32.81497 -32.03746 -31.44219 -30.71794 -30.18730 -27.24636 -26.71529 -25.89687 -24.52776 -24.14918 -23.85338 -22.76117 -22.32834 -22.06588 -21.43302 -20.27000 -19.67691 -18.92820 -18.69668 -18.12017 -17.93893 -17.36238 -17.19219 -16.70593 -16.65714 -16.40906 -16.21076 -16.06259 -16.00188 -15.88321 -15.52481 -15.10913 -15.02755 -14.64101 -14.54862 -14.47543 -14.35937 -14.24201 -14.18268 -14.00785 -13.71007 -13.64048 -13.45553 -13.41499 -12.92500 -12.82112 -12.74055 -12.41097 -12.27504 -12.06227 -12.01282 -11.85723 -11.42567 -11.29110 -11.25226 -11.22001 -11.01251 -10.79872 -10.46361 -10.15788 -10.06343 -10.00640 -9.51378 -9.12012 -5.15558 -0.90266 0.03134 0.05201 0.32163 0.51773 0.65279 1.11350 1.30333 1.49197 1.58086 1.83061 1.95427 1.95555 2.53831 2.56563 2.90295 3.19101 3.42379 3.48754 3.55463 3.64694 3.69218 3.69965 3.72080 3.82674 3.88930 3.90016 3.94865 3.95365 4.10102 4.19960 4.26090 4.34197 4.35875 4.41420 4.52527 4.58520 4.62041 4.69219 4.71043 4.77150 4.78418 4.84300 4.89092 4.96138 5.00162 5.01147 5.04634 5.10100 5.13817 5.23587 5.24173 5.34489 5.43251 5.48719 5.64068 5.83955 5.85330 6.42673 6.58681 6.80640 7.12001 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.035 4.035 3 Si 0.798 3.202 4 C -0.031 4.031 5 C -0.174 4.174 6 C -0.166 4.166 7 C -0.006 4.006 8 C 0.023 3.977 9 C -0.162 4.162 10 C 0.162 3.838 11 O -0.496 6.496 12 C -0.176 4.176 13 C 0.560 3.440 14 O -0.562 6.562 15 N -0.693 5.693 16 C 0.114 3.886 17 H 0.083 0.917 18 C -0.124 4.124 19 C -0.065 4.065 20 H 0.121 0.879 21 C -0.056 4.056 22 C -0.116 4.116 23 C -0.100 4.100 24 C -0.111 4.111 25 Br -0.064 7.064 26 C -0.099 4.099 27 C -0.111 4.111 28 C -0.142 4.142 29 C -0.046 4.046 30 C -0.107 4.107 31 O -0.198 6.198 32 H 0.414 0.586 33 H 0.130 0.870 34 H -0.313 1.313 35 H -0.295 1.295 36 H 0.177 0.823 37 H 0.192 0.808 38 H 0.122 0.878 39 H 0.409 0.591 40 H 0.416 0.584 41 H 0.100 0.900 42 H 0.092 0.908 43 H 0.145 0.855 44 H 0.136 0.864 45 H 0.139 0.861 46 H 0.154 0.846 47 H 0.069 0.931 48 H 0.097 0.903 49 H 0.180 0.820 50 H 0.175 0.825 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.838 -6.322 -6.652 9.606 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.371 6.371 2 C -0.144 4.144 3 Si 0.705 3.295 4 C -0.080 4.080 5 C -0.193 4.193 6 C -0.184 4.184 7 C -0.055 4.055 8 C 0.022 3.978 9 C -0.181 4.181 10 C 0.115 3.885 11 O -0.309 6.309 12 C -0.180 4.180 13 C 0.348 3.652 14 O -0.441 6.441 15 N -0.346 5.346 16 C 0.009 3.991 17 H 0.101 0.899 18 C -0.162 4.162 19 C -0.083 4.083 20 H 0.139 0.861 21 C -0.056 4.056 22 C -0.134 4.134 23 C -0.120 4.120 24 C -0.190 4.190 25 Br 0.021 6.979 26 C -0.119 4.119 27 C -0.129 4.129 28 C -0.181 4.181 29 C -0.064 4.064 30 C -0.124 4.124 31 O -0.097 6.097 32 H 0.267 0.733 33 H 0.148 0.852 34 H -0.241 1.241 35 H -0.222 1.222 36 H 0.195 0.805 37 H 0.209 0.791 38 H 0.140 0.860 39 H 0.269 0.731 40 H 0.255 0.745 41 H 0.119 0.881 42 H 0.111 0.889 43 H 0.162 0.838 44 H 0.154 0.846 45 H 0.157 0.843 46 H 0.172 0.828 47 H 0.088 0.912 48 H 0.115 0.885 49 H 0.197 0.803 50 H 0.192 0.808 Dipole moment (debyes) X Y Z Total from point charges -2.010 -5.202 -4.715 7.303 hybrid contribution 0.377 -0.191 -0.170 0.455 sum -1.633 -5.392 -4.886 7.458 Atomic orbital electron populations 1.86413 1.16038 1.82496 1.52172 1.23897 0.86521 1.11161 0.92855 0.94475 0.77005 0.74334 0.83680 1.22218 1.00478 0.93766 0.91575 1.21911 1.03471 0.95518 0.98404 1.22330 1.00310 0.98829 0.96949 1.20768 1.05300 0.88176 0.91234 1.18017 0.95306 0.94074 0.90365 1.21501 1.01892 0.97554 0.97140 1.18462 0.94553 0.84348 0.91104 1.84730 1.37343 1.28622 1.80182 1.20519 1.05424 0.95184 0.96872 1.18144 0.79125 0.84327 0.83619 1.90828 1.51874 1.25406 1.75997 1.45416 1.56394 1.12213 1.20552 1.21866 0.92537 1.00184 0.84540 0.89906 1.23374 0.99461 0.95018 0.98334 1.21709 0.95053 0.95295 0.96257 0.86121 1.20014 0.96273 0.93559 0.95802 1.21250 0.96652 1.01111 0.94406 1.21292 0.98928 0.92444 0.99344 1.21987 1.02759 0.95654 0.98582 1.96754 1.68145 1.79556 1.53433 1.21341 0.95903 1.00761 0.93908 1.21366 0.98558 0.94321 0.98681 1.23606 0.96334 0.95809 1.02319 1.21231 0.93465 0.95159 0.96567 1.21091 0.99210 0.99242 0.92883 1.83956 1.58809 1.39453 1.27490 0.73301 0.85243 1.24125 1.22234 0.80522 0.79132 0.85964 0.73135 0.74533 0.88129 0.88945 0.83772 0.84636 0.84294 0.82823 0.91188 0.88505 0.80303 0.80778 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.11 12.86 -148.98 -1.92 -0.81 16 2 C -0.03 0.05 2.97 71.24 0.21 0.26 16 3 Si 0.80 -0.24 32.11 68.60 2.20 1.96 16 4 C -0.03 -0.17 6.24 24.90 0.16 -0.02 16 5 C -0.17 -0.40 10.78 22.11 0.24 -0.16 16 6 C -0.17 -0.15 10.26 22.40 0.23 0.08 16 7 C -0.01 -0.04 7.02 24.24 0.17 0.13 16 8 C 0.02 0.08 5.87 -20.08 -0.12 -0.03 16 9 C -0.16 -1.17 9.65 22.61 0.22 -0.95 16 10 C 0.16 1.19 6.71 22.81 0.15 1.34 16 11 O -0.50 -4.90 11.56 -68.97 -0.80 -5.69 16 12 C -0.18 -0.48 5.89 -19.97 -0.12 -0.60 16 13 C 0.56 2.74 7.75 86.62 0.67 3.41 16 14 O -0.56 -7.82 14.76 16.90 0.25 -7.57 16 15 N -0.69 2.34 5.21 -443.42 -2.31 0.03 16 16 C 0.11 -0.33 4.30 45.52 0.20 -0.13 16 17 H 0.08 0.22 7.50 -2.39 -0.02 0.20 16 18 C -0.12 0.91 7.29 31.12 0.23 1.14 16 19 C -0.07 0.50 3.87 -10.92 -0.04 0.46 16 20 H 0.12 -1.39 8.09 -2.38 -0.02 -1.41 16 21 C -0.06 0.23 5.29 -19.86 -0.11 0.13 16 22 C -0.12 0.28 8.63 22.27 0.19 0.47 16 23 C -0.10 -0.05 9.79 22.29 0.22 0.17 16 24 C -0.11 -0.22 6.22 22.31 0.14 -0.08 16 25 Br -0.06 -0.21 33.70 -20.37 -0.69 -0.90 16 26 C -0.10 0.05 9.79 22.29 0.22 0.27 16 27 C -0.11 0.42 9.71 22.27 0.22 0.64 16 28 C -0.14 0.63 7.27 31.21 0.23 0.86 16 29 C -0.05 0.24 9.47 22.24 0.21 0.45 16 30 C -0.11 0.43 9.48 22.26 0.21 0.64 16 31 O -0.20 -1.98 8.79 -6.02 -0.05 -2.03 16 32 H 0.41 -5.59 8.74 -74.06 -0.65 -6.24 16 33 H 0.13 -1.06 7.96 -2.39 -0.02 -1.08 16 34 H -0.31 -3.21 7.11 99.48 0.71 -2.50 16 35 H -0.29 -1.89 7.11 99.48 0.71 -1.18 16 36 H 0.18 -0.43 8.06 -2.91 -0.02 -0.46 16 37 H 0.19 -1.33 7.24 -2.91 -0.02 -1.35 16 38 H 0.12 1.15 7.90 -2.91 -0.02 1.13 16 39 H 0.41 1.03 9.06 -74.06 -0.67 0.35 16 40 H 0.42 -4.44 6.71 -92.71 -0.62 -5.07 16 41 H 0.10 -0.69 7.73 -2.39 -0.02 -0.71 16 42 H 0.09 -0.87 8.14 -2.39 -0.02 -0.89 16 43 H 0.14 -0.78 6.64 -2.91 -0.02 -0.80 16 44 H 0.14 -0.14 8.06 -2.91 -0.02 -0.16 16 45 H 0.14 -0.36 8.06 -2.91 -0.02 -0.38 16 46 H 0.15 -1.37 8.05 -2.91 -0.02 -1.39 16 47 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 48 H 0.10 -0.42 6.30 -2.39 -0.02 -0.44 16 49 H 0.18 -2.57 6.38 -2.91 -0.02 -2.59 16 50 H 0.17 -1.93 6.95 -2.91 -0.02 -1.95 16 Total: 0.00 -33.22 443.16 -0.44 -33.66 By element: Atomic # 1 Polarization: -26.27 SS G_CDS: -0.85 Total: -27.12 kcal Atomic # 6 Polarization: 4.76 SS G_CDS: 3.72 Total: 8.48 kcal Atomic # 7 Polarization: 2.34 SS G_CDS: -2.31 Total: 0.03 kcal Atomic # 8 Polarization: -13.59 SS G_CDS: -2.52 Total: -16.10 kcal Atomic # 14 Polarization: -0.24 SS G_CDS: 2.20 Total: 1.96 kcal Atomic # 35 Polarization: -0.21 SS G_CDS: -0.69 Total: -0.90 kcal Total: -33.22 -0.44 -33.66 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_12807986.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.711 kcal (2) G-P(sol) polarization free energy of solvation -33.218 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.494 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.442 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.660 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.051 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds