Wall clock time and date at job start Sat Mar 6 2021 11:12:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86300 * 109.47190 * 2 1 4 4 C 1.50697 * 109.47590 * 239.99812 * 2 1 3 5 5 C 1.38338 * 119.87479 * 119.72358 * 4 2 1 6 6 C 1.37997 * 120.12885 * 179.72357 * 5 4 2 7 7 C 1.39393 * 119.86987 * 0.55600 * 6 5 4 8 8 C 1.48286 * 120.12540 * 179.70196 * 7 6 5 9 9 C 1.39509 * 119.97148 * 179.74878 * 8 7 6 10 10 C 1.37666 * 120.01718 * 179.72194 * 9 8 7 11 11 C 1.39708 * 119.97785 * 0.55022 * 10 9 8 12 12 C 1.47718 * 120.02162 * 179.74637 * 11 10 9 13 13 O 1.21578 * 119.99468 * 179.97438 * 12 11 10 14 14 N 1.34767 * 120.00406 * 359.97344 * 12 11 10 15 15 C 1.46503 * 120.00097 * 180.02562 * 14 12 11 16 16 H 1.08996 * 112.85162 * 336.19297 * 15 14 12 17 17 C 1.53778 * 113.61555 * 107.50372 * 15 14 12 18 18 C 1.53783 * 87.08248 * 89.11484 * 17 15 14 19 19 H 1.08995 * 113.61436 * 270.88461 * 18 17 15 20 20 C 1.50703 * 113.69235 * 139.99269 * 18 17 15 21 21 C 1.38249 * 119.98599 * 322.19231 * 20 18 17 22 22 C 1.38218 * 120.00298 * 179.76752 * 21 20 18 23 23 C 1.38320 * 119.99614 * 0.50574 * 22 21 20 24 24 Br 1.89092 * 120.01275 * 179.76642 * 23 22 21 25 25 C 1.38331 * 119.97552 * 359.74519 * 23 22 21 26 26 C 1.38215 * 119.98963 * 359.97438 * 25 23 22 27 27 C 1.53781 * 87.07919 * 25.43398 * 18 17 15 28 28 C 1.39703 * 119.95094 * 359.71766 * 11 10 9 29 29 C 1.37664 * 119.97460 * 0.02562 * 28 11 10 30 30 C 1.39404 * 119.75096 * 359.72107 * 7 6 5 31 31 C 1.38003 * 119.86578 * 0.02562 * 30 7 6 32 32 H 0.96695 * 114.00385 * 300.00492 * 1 2 3 33 33 H 1.09001 * 109.47255 * 120.00067 * 2 1 3 34 34 H 1.48506 * 110.00048 * 300.00131 * 3 2 1 35 35 H 1.48502 * 109.99996 * 61.31456 * 3 2 1 36 36 H 1.08005 * 119.92978 * 359.97438 * 5 4 2 37 37 H 1.08005 * 120.06228 * 180.27153 * 6 5 4 38 38 H 1.07991 * 119.99217 * 359.97437 * 9 8 7 39 39 H 1.08000 * 120.01014 * 180.26644 * 10 9 8 40 40 H 0.96997 * 120.00345 * 0.02562 * 14 12 11 41 41 H 1.08997 * 113.61684 * 203.66468 * 17 15 14 42 42 H 1.09002 * 113.61342 * 334.56998 * 17 15 14 43 43 H 1.08002 * 119.99415 * 0.02562 * 21 20 18 44 44 H 1.08009 * 119.99772 * 180.27619 * 22 21 20 45 45 H 1.08004 * 120.00176 * 179.97438 * 25 23 22 46 46 H 1.07996 * 119.99300 * 180.02562 * 26 25 23 47 47 H 1.08996 * 113.61293 * 220.02042 * 27 18 17 48 48 H 1.08997 * 113.69262 * 89.12574 * 27 18 17 49 49 H 1.08005 * 120.01444 * 180.02562 * 28 11 10 50 50 H 1.08005 * 119.98775 * 180.02562 * 29 28 11 51 51 H 1.07997 * 120.06515 * 180.02562 * 30 7 6 52 52 H 1.08002 * 119.93254 * 179.97438 * 31 30 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7219 -0.0340 -2.1421 6 6 3.1895 -0.6810 -3.2677 7 6 2.8544 -2.0155 -3.4909 8 6 3.3483 -2.7144 -4.7019 9 6 3.0153 -4.0516 -4.9195 10 6 3.4686 -4.6997 -6.0462 11 6 4.2719 -4.0212 -6.9662 12 6 4.7635 -4.7174 -8.1727 13 8 5.4622 -4.1263 -8.9732 14 7 4.4376 -6.0075 -8.3862 15 6 4.9257 -6.6980 -9.5826 16 1 5.1690 -6.0146 -10.3961 17 6 6.0282 -7.7298 -9.2917 18 6 4.9032 -8.7589 -9.0916 19 1 4.5340 -8.8086 -8.0673 20 6 5.2145 -10.1162 -9.6679 21 6 5.8998 -10.2182 -10.8642 22 6 6.1898 -11.4629 -11.3907 23 6 5.7851 -12.6063 -10.7258 24 35 6.1758 -14.3092 -11.4489 25 6 5.0949 -12.5035 -9.5314 26 6 4.8104 -11.2586 -9.0027 27 6 4.0425 -7.8804 -10.0148 28 6 4.6094 -2.6838 -6.7444 29 6 4.1506 -2.0361 -5.6196 30 6 2.0527 -2.6905 -2.5716 31 6 1.5952 -2.0347 -1.4469 32 1 -0.3934 0.4417 0.7649 33 1 1.7923 -0.5138 0.8900 34 1 1.5614 2.4679 -1.2085 35 1 1.5878 2.4586 1.2242 36 1 2.9768 1.0015 -1.9706 37 1 3.8102 -0.1531 -3.9766 38 1 2.3983 -4.5772 -4.2058 39 1 3.2072 -5.7336 -6.2167 40 1 3.8800 -6.4789 -7.7478 41 1 6.6659 -7.9412 -10.1500 42 1 6.5943 -7.5198 -8.3841 43 1 6.2122 -9.3253 -11.3854 44 1 6.7291 -11.5426 -12.3231 45 1 4.7784 -13.3961 -9.0120 46 1 4.2720 -11.1783 -8.0700 47 1 3.0055 -7.7919 -9.6911 48 1 4.1361 -8.1320 -11.0712 49 1 5.2300 -2.1582 -7.4551 50 1 4.4110 -1.0020 -5.4481 51 1 1.7903 -3.7246 -2.7393 52 1 0.9737 -2.5565 -0.7342 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_13158362.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:12:42 Heat of formation + Delta-G solvation = 52.374621 kcal Electronic energy + Delta-G solvation = -34285.825004 eV Core-core repulsion = 29614.738962 eV Total energy + Delta-G solvation = -4671.086042 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 464.077 amu Computer time = 1.45 seconds Orbital eigenvalues (eV) -41.78743 -41.07029 -40.46957 -39.39870 -38.66200 -37.64890 -34.94765 -34.03854 -33.05380 -32.51061 -32.03279 -31.56432 -30.95417 -30.19023 -27.15540 -26.70300 -25.89255 -24.63600 -24.44345 -23.81967 -22.68091 -22.44807 -22.20173 -21.30876 -20.19616 -19.19737 -18.56745 -18.21814 -17.81070 -17.26454 -16.90681 -16.70755 -16.48463 -16.21990 -16.06312 -15.95916 -15.66285 -15.38146 -15.19417 -15.13422 -14.90969 -14.83331 -14.58601 -14.48231 -14.32128 -14.26992 -14.05057 -13.96432 -13.71204 -13.53176 -13.44049 -13.21829 -12.90661 -12.89101 -12.52605 -12.39513 -12.11181 -12.05676 -11.89616 -11.86032 -11.62614 -11.41509 -11.28379 -11.21624 -11.11503 -10.79261 -10.45104 -10.14454 -10.04583 -10.00074 -9.94318 -9.50661 -9.05280 -4.94246 -0.67850 0.05917 0.32843 0.36731 0.41447 0.50803 0.65984 1.28807 1.58308 1.78309 1.93615 2.02092 2.56598 2.59615 3.00034 3.35783 3.43599 3.46704 3.62731 3.65500 3.67940 3.75501 3.83337 3.85687 3.89421 3.95726 3.96379 4.02285 4.06010 4.19949 4.27007 4.30400 4.36461 4.37118 4.42108 4.45313 4.62751 4.66193 4.69954 4.71650 4.77877 4.83699 4.89193 4.91493 4.93351 5.02026 5.05165 5.09617 5.12523 5.15652 5.22034 5.24215 5.24873 5.28204 5.42898 5.49537 5.51576 5.64663 5.66527 5.81256 5.84519 5.93748 6.45137 6.56818 7.12917 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.085 4.085 3 Si 0.757 3.243 4 C -0.082 4.082 5 C -0.123 4.123 6 C -0.107 4.107 7 C -0.061 4.061 8 C -0.022 4.022 9 C -0.120 4.120 10 C -0.073 4.073 11 C -0.152 4.152 12 C 0.559 3.441 13 O -0.580 6.580 14 N -0.694 5.694 15 C 0.113 3.887 16 H 0.086 0.914 17 C -0.143 4.143 18 C -0.066 4.066 19 H 0.118 0.882 20 C -0.056 4.056 21 C -0.115 4.115 22 C -0.100 4.100 23 C -0.110 4.110 24 Br -0.064 7.064 25 C -0.099 4.099 26 C -0.112 4.112 27 C -0.124 4.124 28 C -0.070 4.070 29 C -0.123 4.123 30 C -0.107 4.107 31 C -0.103 4.103 32 H 0.395 0.605 33 H 0.098 0.902 34 H -0.300 1.300 35 H -0.287 1.287 36 H 0.141 0.859 37 H 0.147 0.853 38 H 0.156 0.844 39 H 0.159 0.841 40 H 0.415 0.585 41 H 0.098 0.902 42 H 0.069 0.931 43 H 0.146 0.854 44 H 0.137 0.863 45 H 0.139 0.861 46 H 0.153 0.847 47 H 0.090 0.910 48 H 0.102 0.898 49 H 0.128 0.872 50 H 0.147 0.853 51 H 0.149 0.851 52 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.452 -0.900 5.807 6.054 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.368 6.368 2 C -0.194 4.194 3 Si 0.663 3.337 4 C -0.082 4.082 5 C -0.140 4.140 6 C -0.125 4.125 7 C -0.061 4.061 8 C -0.022 4.022 9 C -0.138 4.138 10 C -0.091 4.091 11 C -0.156 4.156 12 C 0.348 3.652 13 O -0.461 6.461 14 N -0.346 5.346 15 C 0.007 3.993 16 H 0.104 0.896 17 C -0.181 4.181 18 C -0.084 4.084 19 H 0.136 0.864 20 C -0.056 4.056 21 C -0.134 4.134 22 C -0.120 4.120 23 C -0.190 4.190 24 Br 0.021 6.979 25 C -0.119 4.119 26 C -0.130 4.130 27 C -0.162 4.162 28 C -0.089 4.089 29 C -0.141 4.141 30 C -0.125 4.125 31 C -0.121 4.121 32 H 0.245 0.755 33 H 0.115 0.885 34 H -0.228 1.228 35 H -0.214 1.214 36 H 0.159 0.841 37 H 0.165 0.835 38 H 0.174 0.826 39 H 0.177 0.823 40 H 0.254 0.746 41 H 0.116 0.884 42 H 0.087 0.913 43 H 0.163 0.837 44 H 0.154 0.846 45 H 0.157 0.843 46 H 0.170 0.830 47 H 0.109 0.891 48 H 0.120 0.880 49 H 0.146 0.854 50 H 0.165 0.835 51 H 0.167 0.833 52 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -0.933 -0.641 4.415 4.558 hybrid contribution -1.289 0.085 0.673 1.456 sum -2.222 -0.556 5.088 5.580 Atomic orbital electron populations 1.86537 1.18483 1.80651 1.51106 1.24986 0.84069 1.11535 0.98780 0.94218 0.90538 0.72570 0.76366 1.19619 0.98026 0.94750 0.95793 1.21095 0.98641 1.00103 0.94192 1.21458 0.99567 0.93902 0.97529 1.18940 0.98836 0.94088 0.94255 1.19142 0.95770 0.94096 0.93199 1.21472 1.00528 0.93603 0.98182 1.21468 0.94435 1.00731 0.92482 1.19980 1.03568 0.95664 0.96342 1.18538 0.79206 0.81988 0.85430 1.90779 1.39868 1.67299 1.48109 1.45454 1.52989 1.10939 1.25182 1.21890 0.96209 0.93314 0.87871 0.89588 1.23565 0.96604 0.94772 1.03173 1.21655 0.97277 0.89059 1.00433 0.86380 1.20007 0.96048 0.95302 0.94274 1.21252 0.98703 0.97324 0.96093 1.21294 0.99127 0.91381 1.00151 1.21982 1.06269 0.91372 0.99337 1.96753 1.94113 1.21969 1.85022 1.21336 0.97088 0.99540 0.93935 1.21355 0.99935 0.90817 1.00917 1.23382 0.99289 0.92531 1.00989 1.21256 0.97280 0.93449 0.96891 1.21383 0.97930 1.01244 0.93537 1.21528 0.96571 1.01012 0.93350 1.21115 0.98923 0.94125 0.97935 0.75459 0.88466 1.22821 1.21407 0.84132 0.83501 0.82623 0.82318 0.74600 0.88362 0.91259 0.83675 0.84553 0.84317 0.82958 0.89121 0.87995 0.85421 0.83511 0.83340 0.84880 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.69 12.74 -148.98 -1.90 -2.59 16 2 C -0.08 0.13 2.81 71.23 0.20 0.33 16 3 Si 0.76 -1.80 29.78 68.60 2.04 0.24 16 4 C -0.08 -0.08 5.43 -19.82 -0.11 -0.19 16 5 C -0.12 0.02 8.65 22.24 0.19 0.21 16 6 C -0.11 0.06 9.43 22.49 0.21 0.27 16 7 C -0.06 0.00 5.88 -20.04 -0.12 -0.12 16 8 C -0.02 0.01 5.88 -19.99 -0.12 -0.11 16 9 C -0.12 0.46 9.41 22.44 0.21 0.67 16 10 C -0.07 0.32 9.52 22.49 0.21 0.53 16 11 C -0.15 -0.25 5.88 -20.06 -0.12 -0.37 16 12 C 0.56 2.55 7.77 86.75 0.67 3.23 16 13 O -0.58 -7.82 15.93 -3.96 -0.06 -7.88 16 14 N -0.69 2.00 5.21 -443.03 -2.31 -0.30 16 15 C 0.11 -0.30 4.32 45.52 0.20 -0.10 16 16 H 0.09 0.20 7.46 -2.39 -0.02 0.18 16 17 C -0.14 0.58 7.26 31.12 0.23 0.81 16 18 C -0.07 0.48 3.85 -11.01 -0.04 0.43 16 19 H 0.12 -1.24 8.09 -2.39 -0.02 -1.26 16 20 C -0.06 0.21 5.29 -19.86 -0.11 0.11 16 21 C -0.12 0.27 8.60 22.27 0.19 0.46 16 22 C -0.10 -0.04 9.79 22.28 0.22 0.18 16 23 C -0.11 -0.23 6.22 22.31 0.14 -0.09 16 24 Br -0.06 -0.21 33.70 -20.37 -0.69 -0.90 16 25 C -0.10 0.03 9.79 22.29 0.22 0.25 16 26 C -0.11 0.38 9.71 22.26 0.22 0.60 16 27 C -0.12 0.88 7.29 31.12 0.23 1.10 16 28 C -0.07 -0.22 9.58 22.49 0.22 0.00 16 29 C -0.12 -0.03 9.41 22.44 0.21 0.18 16 30 C -0.11 0.12 9.43 22.50 0.21 0.33 16 31 C -0.10 -0.05 9.59 22.24 0.21 0.16 16 32 H 0.39 -2.60 8.74 -74.06 -0.65 -3.25 16 33 H 0.10 -0.54 7.96 -2.39 -0.02 -0.56 16 34 H -0.30 -1.57 7.11 99.48 0.71 -0.86 16 35 H -0.29 -0.53 7.11 99.48 0.71 0.18 16 36 H 0.14 -0.49 4.86 -2.91 -0.01 -0.51 16 37 H 0.15 -0.67 6.19 -2.91 -0.02 -0.69 16 38 H 0.16 -1.37 6.19 -2.92 -0.02 -1.39 16 39 H 0.16 -1.85 6.39 -2.91 -0.02 -1.87 16 40 H 0.42 -3.93 6.72 -92.71 -0.62 -4.55 16 41 H 0.10 -0.42 6.33 -2.39 -0.02 -0.44 16 42 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 43 H 0.15 -0.80 6.68 -2.91 -0.02 -0.82 16 44 H 0.14 -0.16 8.06 -2.91 -0.02 -0.18 16 45 H 0.14 -0.32 8.06 -2.91 -0.02 -0.34 16 46 H 0.15 -1.26 8.05 -2.91 -0.02 -1.28 16 47 H 0.09 -0.80 8.14 -2.39 -0.02 -0.82 16 48 H 0.10 -0.70 7.72 -2.39 -0.02 -0.72 16 49 H 0.13 0.60 7.64 -2.91 -0.02 0.58 16 50 H 0.15 -0.50 6.19 -2.91 -0.02 -0.52 16 51 H 0.15 -0.91 6.19 -2.91 -0.02 -0.93 16 52 H 0.13 -0.17 8.06 -2.91 -0.02 -0.20 16 Total: 0.00 -23.43 444.22 0.44 -22.99 By element: Atomic # 1 Polarization: -20.20 SS G_CDS: -0.23 Total: -20.43 kcal Atomic # 6 Polarization: 5.30 SS G_CDS: 3.58 Total: 8.88 kcal Atomic # 7 Polarization: 2.00 SS G_CDS: -2.31 Total: -0.30 kcal Atomic # 8 Polarization: -8.52 SS G_CDS: -1.96 Total: -10.48 kcal Atomic # 14 Polarization: -1.80 SS G_CDS: 2.04 Total: 0.24 kcal Atomic # 35 Polarization: -0.21 SS G_CDS: -0.69 Total: -0.90 kcal Total: -23.43 0.44 -22.99 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_13158362.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 75.364 kcal (2) G-P(sol) polarization free energy of solvation -23.430 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 51.934 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.440 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.989 kcal (6) G-S(sol) free energy of system = (1) + (5) 52.375 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.45 seconds