Wall clock time and date at job start Sat Mar 6 2021 11:12:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86300 * 109.47378 * 2 1 4 4 C 1.50707 * 109.46973 * 120.00211 * 2 1 3 5 5 C 1.38898 * 119.67230 * 245.00029 * 4 2 1 6 6 C 1.36470 * 120.61316 * 180.02562 * 5 4 2 7 7 C 1.40063 * 119.83291 * 359.96606 * 6 5 4 8 8 C 1.41594 * 133.38525 * 180.30753 * 7 6 5 9 9 C 1.35863 * 107.72937 * 180.10787 * 8 7 6 10 10 C 1.47058 * 125.42589 * 179.88264 * 9 8 7 11 11 O 1.21653 * 119.99985 * 359.69148 * 10 9 8 12 12 N 1.34777 * 119.99966 * 179.41864 * 10 9 8 13 13 C 1.46504 * 119.99854 * 180.27718 * 12 10 9 14 14 H 1.08998 * 112.84936 * 23.79679 * 13 12 10 15 15 C 1.53781 * 113.61288 * 154.99591 * 13 12 10 16 16 C 1.53785 * 87.08071 * 89.11253 * 15 13 12 17 17 H 1.09001 * 113.61771 * 270.88745 * 16 15 13 18 18 C 1.50699 * 113.61480 * 140.06000 * 16 15 13 19 19 C 1.38240 * 119.99366 * 299.73148 * 18 16 15 20 20 C 1.38220 * 120.00953 * 179.72333 * 19 18 16 21 21 C 1.38325 * 119.99059 * 0.54717 * 20 19 18 22 22 Br 1.89096 * 120.00980 * 179.70299 * 21 20 19 23 23 C 1.38328 * 119.97893 * 359.72707 * 21 20 19 24 24 C 1.38224 * 119.98939 * 359.97438 * 23 21 20 25 25 C 1.53782 * 113.61214 * 252.49376 * 13 12 10 26 26 N 1.38152 * 109.14669 * 359.61718 * 9 8 7 27 27 C 1.37494 * 108.78718 * 0.24368 * 26 9 8 28 28 C 1.37705 * 119.67630 * 64.97368 * 4 2 1 29 29 H 0.96703 * 113.99451 * 299.99817 * 1 2 3 30 30 H 1.08997 * 109.46728 * 239.99870 * 2 1 3 31 31 H 1.48495 * 110.00148 * 178.68041 * 3 2 1 32 32 H 1.48507 * 109.99763 * 300.00221 * 3 2 1 33 33 H 1.08001 * 119.69220 * 359.97438 * 5 4 2 34 34 H 1.08005 * 120.08574 * 179.97438 * 6 5 4 35 35 H 1.08003 * 126.13486 * 359.96864 * 8 7 6 36 36 H 0.97000 * 119.99736 * 0.26993 * 12 10 9 37 37 H 1.08993 * 113.61456 * 203.66261 * 15 13 12 38 38 H 1.08994 * 113.61312 * 334.48508 * 15 13 12 39 39 H 1.08006 * 119.99242 * 359.97438 * 19 18 16 40 40 H 1.08005 * 119.99891 * 180.24820 * 20 19 18 41 41 H 1.07993 * 120.00626 * 179.97438 * 23 21 20 42 42 H 1.07992 * 119.99260 * 179.97438 * 24 23 21 43 43 H 1.09000 * 113.61489 * 25.43297 * 25 13 12 44 44 H 1.08992 * 113.61429 * 156.33792 * 25 13 12 45 45 H 0.96996 * 125.60235 * 180.26548 * 26 9 8 46 46 H 1.08001 * 120.09749 * 0.02562 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2305 5 6 2.6414 -0.0024 2.1916 6 6 3.1056 -0.6267 3.3129 7 6 2.8648 -1.9938 3.4995 8 6 3.1978 -2.9085 4.5278 9 6 2.7034 -4.1242 4.1761 10 6 2.8306 -5.3574 4.9671 11 8 3.4234 -5.3403 6.0293 12 7 2.2858 -6.5053 4.5178 13 6 2.4073 -7.7325 5.3088 14 1 2.5695 -7.5384 6.3690 15 6 1.2928 -8.7557 5.0333 16 6 2.1935 -9.3196 3.9215 17 1 2.0447 -8.8404 2.9539 18 6 2.1791 -10.8242 3.8379 19 6 2.5864 -11.5804 4.9211 20 6 2.5679 -12.9605 4.8468 21 6 2.1525 -13.5849 3.6844 22 35 2.1350 -15.4728 3.5792 23 6 1.7504 -12.8277 2.5988 24 6 1.7634 -11.4477 2.6762 25 6 3.3869 -8.7561 4.7110 26 7 2.0570 -4.0159 2.9600 27 6 2.1445 -2.7141 2.5263 28 6 1.6814 -2.0551 1.3912 29 1 -0.3932 0.4417 0.7651 30 1 1.7923 -0.5139 -0.8900 31 1 3.5347 1.7702 0.0321 32 1 1.5616 2.4679 -1.2085 33 1 2.8286 1.0517 2.0498 34 1 3.6571 -0.0679 4.0546 35 1 3.7482 -2.6812 5.4288 36 1 1.8131 -6.5189 3.6709 37 1 1.1262 -9.4518 5.8553 38 1 0.3703 -8.3078 4.6643 39 1 2.9152 -11.0928 5.8270 40 1 2.8823 -13.5512 5.6945 41 1 1.4264 -13.3146 1.6910 42 1 1.4499 -10.8565 1.8286 43 1 4.1553 -8.3086 4.0805 44 1 3.7928 -9.4522 5.4449 45 1 1.6140 -4.7393 2.4896 46 1 1.1284 -2.5969 0.6382 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10390340_13158378.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:12:50 Heat of formation + Delta-G solvation = 51.917093 kcal Electronic energy + Delta-G solvation = -30312.092538 eV Core-core repulsion = 25987.550645 eV Total energy + Delta-G solvation = -4324.541893 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 427.057 amu Computer time = 1.92 seconds Orbital eigenvalues (eV) -42.76224 -41.69283 -40.39385 -39.22052 -38.72366 -36.93093 -34.93061 -33.35820 -33.10531 -32.17153 -31.20136 -30.46286 -30.35379 -27.25781 -26.97103 -25.97255 -24.54637 -23.95768 -23.23747 -22.52841 -22.05039 -21.32554 -20.41222 -19.63562 -18.52809 -18.15248 -17.78663 -17.18200 -16.86333 -16.62312 -16.50560 -16.26502 -16.19287 -15.72731 -15.58536 -15.41035 -15.12717 -15.02162 -14.83229 -14.63803 -14.61798 -14.49943 -14.41737 -14.07855 -13.72545 -13.62288 -13.20593 -13.02860 -12.61741 -12.58853 -12.57294 -12.20470 -12.07515 -12.01544 -11.69889 -11.53918 -11.44815 -11.33079 -11.26464 -10.97303 -10.48812 -10.35409 -10.12969 -9.60442 -9.36874 -8.87375 -5.03031 -0.38990 -0.05140 0.19944 0.47902 0.62495 0.95066 1.26630 1.64000 1.68642 1.81560 1.98179 2.18703 2.43625 2.73526 3.18485 3.38364 3.41380 3.43284 3.53036 3.59937 3.63529 3.66743 3.73100 3.80173 3.93185 3.96444 4.19209 4.19286 4.24379 4.25752 4.36991 4.41370 4.42316 4.49571 4.54013 4.58050 4.63071 4.67138 4.77975 4.83583 4.85052 4.87916 4.92361 5.09857 5.12057 5.21849 5.32765 5.36085 5.44263 5.48602 5.56547 5.68743 5.91809 6.12151 6.27425 6.53025 6.91559 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.068 4.068 3 Si 0.690 3.310 4 C -0.087 4.087 5 C -0.145 4.145 6 C -0.050 4.050 7 C -0.117 4.117 8 C -0.097 4.097 9 C 0.012 3.988 10 C 0.589 3.411 11 O -0.514 6.514 12 N -0.712 5.712 13 C 0.120 3.880 14 H 0.111 0.889 15 C -0.134 4.134 16 C -0.077 4.077 17 H 0.098 0.902 18 C -0.056 4.056 19 C -0.111 4.111 20 C -0.087 4.087 21 C -0.094 4.094 22 Br -0.050 7.050 23 C -0.088 4.088 24 C -0.110 4.110 25 C -0.143 4.143 26 N -0.579 5.579 27 C 0.116 3.884 28 C -0.104 4.104 29 H 0.380 0.620 30 H 0.113 0.887 31 H -0.257 1.257 32 H -0.256 1.256 33 H 0.130 0.870 34 H 0.133 0.867 35 H 0.159 0.841 36 H 0.396 0.604 37 H 0.102 0.898 38 H 0.078 0.922 39 H 0.133 0.867 40 H 0.134 0.866 41 H 0.133 0.867 42 H 0.130 0.870 43 H 0.077 0.923 44 H 0.099 0.901 45 H 0.417 0.583 46 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.211 1.736 -0.218 2.820 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.179 4.179 3 Si 0.592 3.408 4 C -0.089 4.089 5 C -0.163 4.163 6 C -0.069 4.069 7 C -0.122 4.122 8 C -0.124 4.124 9 C -0.097 4.097 10 C 0.375 3.625 11 O -0.388 6.388 12 N -0.363 5.363 13 C 0.015 3.985 14 H 0.129 0.871 15 C -0.172 4.172 16 C -0.095 4.095 17 H 0.116 0.884 18 C -0.057 4.057 19 C -0.130 4.130 20 C -0.107 4.107 21 C -0.174 4.174 22 Br 0.036 6.964 23 C -0.108 4.108 24 C -0.129 4.129 25 C -0.182 4.182 26 N -0.184 5.184 27 C 0.006 3.994 28 C -0.125 4.125 29 H 0.227 0.773 30 H 0.131 0.869 31 H -0.181 1.181 32 H -0.181 1.181 33 H 0.147 0.853 34 H 0.151 0.849 35 H 0.177 0.823 36 H 0.230 0.770 37 H 0.120 0.880 38 H 0.097 0.903 39 H 0.151 0.849 40 H 0.152 0.848 41 H 0.151 0.849 42 H 0.148 0.852 43 H 0.095 0.905 44 H 0.117 0.883 45 H 0.255 0.745 46 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges -1.256 1.145 -0.460 1.760 hybrid contribution -0.380 -0.826 -0.960 1.322 sum -1.635 0.319 -1.419 2.189 Atomic orbital electron populations 1.86507 1.17040 1.81728 1.49318 1.25082 0.85262 1.10305 0.97259 0.94601 0.81207 0.77897 0.87085 1.20040 0.98699 0.93551 0.96647 1.20467 1.01519 0.99401 0.94919 1.20390 0.97459 0.91960 0.97051 1.18224 1.03740 0.94406 0.95793 1.20988 1.01835 0.89852 0.99738 1.20052 1.05096 0.95868 0.88706 1.17179 0.78784 0.81625 0.84881 1.90890 1.41451 1.84868 1.21588 1.45549 1.57573 1.08608 1.24586 1.21903 0.96743 0.82817 0.97063 0.87068 1.23438 0.97238 0.97610 0.98949 1.21653 0.97783 0.90995 0.99077 0.88358 1.19803 0.97201 0.94998 0.93674 1.21043 1.00062 0.92948 0.98916 1.21154 0.98014 0.94898 0.96598 1.21871 1.06997 0.90737 0.97749 1.96788 1.97839 1.02956 1.98820 1.21153 0.98143 0.93874 0.97591 1.21076 1.00072 0.93887 0.97891 1.23586 0.96626 0.98028 0.99950 1.41884 1.48951 1.09002 1.18536 1.18308 1.00625 0.83918 0.96538 1.19863 1.02717 0.93908 0.95985 0.77266 0.86939 1.18144 1.18078 0.85293 0.84939 0.82328 0.76956 0.87951 0.90314 0.84887 0.84822 0.84907 0.85194 0.90457 0.88256 0.74539 0.85586 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.23 12.83 -35.23 -0.45 -0.22 16 2 C -0.07 0.06 2.79 36.01 0.10 0.16 16 3 Si 0.69 -1.03 29.76 -169.99 -5.06 -6.09 16 4 C -0.09 0.04 5.36 -104.57 -0.56 -0.52 16 5 C -0.14 0.13 8.59 -39.98 -0.34 -0.22 16 6 C -0.05 0.01 10.06 -39.54 -0.40 -0.38 16 7 C -0.12 -0.13 6.16 -106.93 -0.66 -0.79 16 8 C -0.10 -0.13 10.53 -39.15 -0.41 -0.54 16 9 C 0.01 0.01 6.97 -82.29 -0.57 -0.57 16 10 C 0.59 0.67 7.80 -12.68 -0.10 0.57 16 11 O -0.51 -2.48 16.44 5.23 0.09 -2.39 16 12 N -0.71 1.49 5.26 -54.20 -0.29 1.21 16 13 C 0.12 -0.25 4.32 -67.12 -0.29 -0.54 16 14 H 0.11 -0.06 7.46 -51.93 -0.39 -0.45 16 15 C -0.13 0.47 7.29 -25.92 -0.19 0.29 16 16 C -0.08 0.25 3.85 -90.95 -0.35 -0.10 16 17 H 0.10 -0.42 8.09 -51.93 -0.42 -0.84 16 18 C -0.06 0.09 5.29 -104.62 -0.55 -0.46 16 19 C -0.11 0.15 8.63 -39.59 -0.34 -0.19 16 20 C -0.09 0.02 9.79 -39.56 -0.39 -0.37 16 21 C -0.09 -0.06 6.22 -39.52 -0.25 -0.31 16 22 Br -0.05 -0.06 33.70 -68.01 -2.29 -2.35 16 23 C -0.09 0.01 9.79 -39.55 -0.39 -0.37 16 24 C -0.11 0.14 9.71 -39.59 -0.38 -0.25 16 25 C -0.14 0.35 7.25 -25.91 -0.19 0.17 16 26 N -0.58 0.76 6.07 -7.35 -0.04 0.72 16 27 C 0.12 0.05 7.25 -83.97 -0.61 -0.56 16 28 C -0.10 0.00 9.69 -39.42 -0.38 -0.38 16 29 H 0.38 -1.58 8.70 45.56 0.40 -1.18 16 30 H 0.11 -0.06 7.96 -51.93 -0.41 -0.47 16 31 H -0.26 -0.24 7.11 56.52 0.40 0.16 16 32 H -0.26 -0.47 7.11 56.52 0.40 -0.07 16 33 H 0.13 -0.37 4.85 -52.49 -0.25 -0.63 16 34 H 0.13 -0.29 8.06 -52.48 -0.42 -0.72 16 35 H 0.16 0.11 8.06 -52.48 -0.42 -0.31 16 36 H 0.40 -1.87 7.76 -40.82 -0.32 -2.19 16 37 H 0.10 -0.36 7.73 -51.93 -0.40 -0.76 16 38 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 39 H 0.13 -0.40 6.65 -52.48 -0.35 -0.75 16 40 H 0.13 -0.16 8.06 -52.48 -0.42 -0.59 16 41 H 0.13 -0.16 8.06 -52.49 -0.42 -0.58 16 42 H 0.13 -0.40 8.05 -52.49 -0.42 -0.82 16 43 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 44 H 0.10 -0.28 6.30 -51.93 -0.33 -0.60 16 45 H 0.42 -1.84 8.12 -40.82 -0.33 -2.17 16 46 H 0.13 -0.12 8.06 -52.49 -0.42 -0.55 16 LS Contribution 403.86 15.07 6.09 6.09 Total: 0.00 -8.61 403.86 -14.60 -23.20 By element: Atomic # 1 Polarization: -9.40 SS G_CDS: -5.39 Total: -14.78 kcal Atomic # 6 Polarization: 1.87 SS G_CDS: -7.25 Total: -5.38 kcal Atomic # 7 Polarization: 2.26 SS G_CDS: -0.33 Total: 1.93 kcal Atomic # 8 Polarization: -2.25 SS G_CDS: -0.37 Total: -2.62 kcal Atomic # 14 Polarization: -1.03 SS G_CDS: -5.06 Total: -6.09 kcal Atomic # 35 Polarization: -0.06 SS G_CDS: -2.29 Total: -2.35 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -8.61 -14.60 -23.20 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_13158378.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 75.120 kcal (2) G-P(sol) polarization free energy of solvation -8.605 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 66.515 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.598 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.203 kcal (6) G-S(sol) free energy of system = (1) + (5) 51.917 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.92 seconds